EY720451

Overview
NameEY720451
Unique NameEY720451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720451_ssr716 microsatellite EY720451_ssr716:716..725. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11247 contig Csv1_Contig11247:1..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720451 vs. ExPASy Swiss-Prot
Match: QOR_PSEAE (Quinone oxidoreductase OS=Pseudomonas aeruginosa GN=qor PE=3 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 7.235e-65
Identity = 120/180 (66.67%), Postives = 147/180 (81.67%), Query Frame = -1
Query:  234 LLHAPLGGVGLIACQWARALGRKXIGPLSSPEKAEIARAHGAWETIDYSRENVPERVLELTAGKK*PVVYDGVGKDTWETSMDRLEPRGMMVSFGNASGPVAGVNLGIMNQKGSLYVTRPSLGVHVNTLAKLQAASEELFDLVLKKRIKVRIDQRYSLEQAGEAQTALASRKTTGATVLM 773
            L HA  GGVGL ACQWA+ALG + IG +SSPEKA +AR HGAWETIDYS ENV  RVLELT GKK PVVYD VGKDTWETS+D + PRG++VSFGNASGPV GVNLGI++QKGSLYVTRP+LG + +T  KLQA ++ELF L+ +  I++ I+QR++L +A  A T LA+R+TTG+TVL+
Sbjct:  145 LFHAAAGGVGLFACQWAKALGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRVLELTDGKKCPVVYDSVGKDTWETSLDCVAPRGLLVSFGNASGPVTGVNLGILSQKGSLYVTRPTLGSYADTPEKLQAMADELFGLIERGDIRIEINQRFALAEAARAHTELAARRTTGSTVLL 324          
BLAST of EY720451 vs. ExPASy Swiss-Prot
Match: QOR_SALTY (Quinone oxidoreductase OS=Salmonella typhimurium GN=qor PE=3 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.378e-52
Identity = 106/182 (58.24%), Postives = 131/182 (71.98%), Query Frame = -1
Query:  234 LLHAPLGGVGLIACQWARALGRKXIGPLSSPEKAEIARAHGAWETIDYSRENVPERVLELTAGKK*PVVYDGVGKDTWETSMDRLEPRGMMVSFGNASGPVAGVNLGIMNQKGSLYVTRPSLGVHVNTLAKLQAASEELFDLVLKKRIKVRI--DQRYSLEQAGEAQTALASRKTTGATVLM 773
            L HA  GGVGLIACQWA+ALG K IG + S +KA+ A   GAW+ I+Y  E++ ERV E+T GKK  VVYD VGKDTWE S+D L+ RG+MVSFGNASGPV GVNLGI+NQKGSLY TRPSL  ++ T  +L  AS ELF L+    IKV +  +QRY+L+ A  A   L SR T G+++L+
Sbjct:  145 LFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRALDAGAWQVINYREESIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYATRPSLQGYITTREELTEASNELFSLIASGVIKVDVAENQRYALKDARRAHEVLESRATQGSSLLI 326          
BLAST of EY720451 vs. ExPASy Swiss-Prot
Match: QOR_ECOLI (Quinone oxidoreductase OS=Escherichia coli (strain K12) GN=qor PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.263e-49
Identity = 101/182 (55.49%), Postives = 129/182 (70.88%), Query Frame = -1
Query:  234 LLHAPLGGVGLIACQWARALGRKXIGPLSSPEKAEIARAHGAWETIDYSRENVPERVLELTAGKK*PVVYDGVGKDTWETSMDRLEPRGMMVSFGNASGPVAGVNLGIMNQKGSLYVTRPSLGVHVNTLAKLQAASEELFDLVLKKRIKVRI--DQRYSLEQAGEAQTALASRKTTGATVLM 773
            L HA  GGVGLIACQWA+ALG K IG + + +KA+ A   GAW+ I+Y  E++ ER+ E+T GKK  VVYD VG+DTWE S+D L+ RG+MVSFGN+SG V GVNLGI+NQKGSLYVTRPSL  ++ T  +L  AS ELF L+    IKV +   Q+Y L+ A  A   L SR T G+++L+
Sbjct:  145 LFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 326          
BLAST of EY720451 vs. ExPASy Swiss-Prot
Match: QOR_YEAST (Probable quinone oxidoreductase OS=Saccharomyces cerevisiae GN=ZTA1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22
Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = -1
Query:  237 LLHAPLGGVGLIACQWARALGRKXIGPLSSPEKAEIARAHGAWETIDYSRENVPERVLELTAGKK*PVVYDGVGKDTWETSMDRLEPRGMMVSFGNASGPVAGVNLGIMNQKGSLYVTRPSLGVHVNTLAKLQAASEELFDLVLKKRIKVRIDQRYSLEQAGEAQTALASRKTTGATVL 773
            LL A  GGVGLI  Q  +  G   I   S+ EK +IA+ +GA   I+ S+E++  +VL+ T GK     +D VGKDT+E S+  L+ +G+ VSFGNASG +   ++  ++ K ++ + RP L  ++    + +  S+E F LV  K++ ++I + Y L     A   + SRKT G  VL
Sbjct:  153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPK-NITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVL 330          
BLAST of EY720451 vs. ExPASy Swiss-Prot
Match: QOR_SCHPO (Probable quinone oxidoreductase OS=Schizosaccharomyces pombe GN=zta1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.156e-20
Identity = 65/180 (36.11%), Postives = 93/180 (51.67%), Query Frame = -1
Query:  234 LLHAPLGGVGLIACQWARALGRKXIGPLSSPEKAEIARAHGAWETIDYSRENVPERVLELTAGKK*PVVYDGVGKDTWETSMDRLEPRGMMVSFGNASGPVAGVNLGIMNQKGSLYVTRPSLGVHVNTLAKLQAASEELFDLVLKKRIKVRIDQRYSLEQAGEAQTALASRKTTGATVLM 773
            ++HA  GGVGL+ CQ  RA     I   S+  K  IA  +GA   I  S E++ + V + T GK     YD VG DT  +S+D L   G MVSFGNASG +  + L  ++ +  L   RPSL  ++   A  +     L+  +L   + + I   + L +A EA  A+ SR TTG  +L+
Sbjct:  145 VVHAAAGGVGLLLCQMLRARNVHVIATASTAAKRRIAIKNGA--EIACSYEDLTKVVADYTNGKGVDAAYDSVGIDTLSSSLDALRNGGTMVSFGNASGAIDAIPLKFLSAR-CLKFVRPSLFGYITGHAVFEGYVSRLWKEILDNNLNIAIHHIFKLSEAKEAHDAIESRATTGKLLLL 321          
The following BLAST results are available for this feature:
BLAST of EY720451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
QOR_PSEAE7.235e-6566.67Quinone oxidoreductase OS=Pseudomonas aeruginosa G... [more]
QOR_SALTY5.378e-5258.24Quinone oxidoreductase OS=Salmonella typhimurium G... [more]
QOR_ECOLI3.263e-4955.49Quinone oxidoreductase OS=Escherichia coli (strain... [more]
QOR_YEAST2.603e-2236.87Probable quinone oxidoreductase OS=Saccharomyces c... [more]
QOR_SCHPO4.156e-2036.11Probable quinone oxidoreductase OS=Schizosaccharom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-F07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720451 ID=EY720451; Name=EY720451; organism=Citrus sinensis; type=EST; length=788bp
TCATGTATTCCCGGCATGGCGGCCAGTTCCGGACGGCCGGAGGCGGAGGA
AGGGGCGGACGGCATGCGTGAGGCTCCAACGGATAGGGTGAGGCCAGGAT
AGCAACGGCCCACCGTGCTGGCTTGTCCGCCCGTGCATGGCGATTTGTCC
CGGTGCGCACGGCAAAAAAAAAGCGGGACGCGCCATGCGTCCCGCCTTGC
CCGCGGCGCCAGGGGCGCGCCGGATCAGTCCATCATCAGCACCGTGGCGC
CGGTGGTCTTGCGCGAAGCCAGCGCGGTCTGCGCTTCGCCGGCCTGTTCC
AGGCTGTAGCGCTGGTCGATGCGGACCTTGATCCTCTTCTTCAGCACCAG
GTCGAACAGCTCTTCCGAGGCGGCCTGCAGCTTTGCCAGCGTATTGACGT
GCACGCCCAGCGACGGACGCGTCACGTACAGGCTGCCCTTCTGGTTCATG
ATGCCCAGGTTCACGCCCGCCACCGGACCGGAGGCGTTGCCGAAGCTGAC
CATCATGCCGCGCGGCTCCAGTCTGTCCATCGAAGTTTCCCAAGTGTCCT
TGCCGACGCCGTCATACACCACCGGTCACTTCTTGCCGGCGGTCAGTTCG
AGCACGCGCTCGGGCACGTTCTCGCGCGAGTAGTCGATGGTTTCCCAGGC
GCCGTGGGCGCGGGCGATTTCGGCCTTCTCGGGGCTGGAGAGGGGGCCGA
TTANCTTCCGGCCGAGCGCGCGCGCCCATTGGCAAGCAATCAGGCCCACG
CCCCCGAGGGGCGCGTGTAGAAGATCCAGGCGTACTTT
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