EY720436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.132e-48 Identity = 109/169 (64.50%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 69 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSV--SLRRARTPKIYAAKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVK 569 MASTFTA SSI SM+APN TD FGRRQ+V LRR+ + AAK+LHFNKDG ++KL GVNKLA LVGVTLGPKGRNVVL SKYG+P+IVNDGVTVA+EVE EDPVENIGAKLVRQAAAKTNDLAGDGTT + L +G +GVK Sbjct: 1 MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSS---------FGRRQNVFPKLRRSSPAVVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVK 160 HSP 2 Score: 81.2629 bits (199), Expect = 8.186e-15 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 524 TSVVLAQGLIPEGCKVXAXGANPVLITRGLEKTSQALVSELKQMSKEVEDIEL 682 TSVVLAQG I EG KV A GANPVLITRG+EKT++ALV+ELK+MSKEVED EL Sbjct: 146 TSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVAELKKMSKEVEDSEL 198
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 4.301e-48 Identity = 108/169 (63.91%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 69 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSVSLRRARTPK--IYAAKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVK 569 MASTFTA SSI SM+APNG +D FGRRQSV R R+ + AAK+LHFNKDG +++L GVNKLA LVGVTLGPKGRNVVL SKYG+P+IVNDGVTVA+EVE EDPVENIGAKLVRQAAAKTNDLAGDGTT + L +G +GVK Sbjct: 1 MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSS---------FGRRQSVCPRPRRSSSAIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVK 160 HSP 2 Score: 81.2629 bits (199), Expect = 8.186e-15 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 524 TSVVLAQGLIPEGCKVXAXGANPVLITRGLEKTSQALVSELKQMSKEVEDIEL 682 TSVVLAQG I EG KV A GANPVLITRG+EKT++ALV+ELK+MSKEVED EL Sbjct: 146 TSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVEDSEL 198
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.700e-42 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 3 Query: 225 RRARTPKIYA-AKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVK 569 R+ R K+ A AK+LHFNKDG A+KKL NGVNKLA LVGVTLGPKGRNVVL SKYG+PKIVNDGVTVAKEVE EDPVENIGAKLVRQAAAKTNDLAGDGTT + L +GL +GVK Sbjct: 39 RKNRNVKVSAMAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVK 154 HSP 2 Score: 83.9593 bits (206), Expect = 1.263e-15 Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 2 Query: 524 TSVVLAQGLIPEGCKVXAXGANPVLITRGLEKTSQALVSELKQMSKEVEDIEL 682 TSVVLAQGLI EG KV A GANPVLITRG+EKTS+ALV+ELK+MSKEVED EL Sbjct: 140 TSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAELKKMSKEVEDSEL 192
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH60_LACDB (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27 Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 3 Query: 255 AKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AKD+ F++D A + L NGVNKLA V TLGPKGRNVVL YGAP I NDGVT+AK +E ED ENIGAKLV +AA+KTND+AGDGTT L + + +G+K+ Sbjct: 2 AKDIKFSED--ARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEAASKTNDIAGDGTTTATVLTQAIVQEGMKN 105
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH60_LACDA (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27 Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 3 Query: 255 AKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AKD+ F++D A + L NGVNKLA V TLGPKGRNVVL YGAP I NDGVT+AK +E ED ENIGAKLV +AA+KTND+AGDGTT L + + +G+K+ Sbjct: 2 AKDIKFSED--ARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEAASKTNDIAGDGTTTATVLTQAIVQEGMKN 105
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH60_CALS8 (60 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 3 Query: 252 AAKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AAK + F+++ A + L GVNKLA V VTLGPKGRNVVL K+G+P+IVNDGVT+AKE+E EDP EN+GA++VR+ A+KTND+AGDGTT L + + +G+K+ Sbjct: 2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKN 106
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH60_ANATD (60 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 3 Query: 252 AAKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AAK + F+++ A + L GVNKLA V VTLGPKGRNVVL K+G+P+IVNDGVT+AKE+E EDP EN+GA++VR+ A+KTND+AGDGTT L + + +G+K+ Sbjct: 2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKN 106
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH60_CHLT3 (60 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27 Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = 3 Query: 252 AAKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AAK++HF+ +G L GV+KLA V VTLGP GRNV++ K+GAP + DGVTVAKEVE EDPVEN+GA++VR+ A+KT+D+AGDGTT L + +Y +G+K+ Sbjct: 2 AAKEIHFDAEG--RNALKRGVDKLADAVKVTLGPAGRNVIIDKKFGAPTVTKDGVTVAKEVELEDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKN 106
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.590e-26 Identity = 60/107 (56.07%), Postives = 80/107 (74.77%), Query Frame = 3 Query: 252 AAKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AAK+LHFN D A K GV++LA V VTLGPKGRNVV+ K+GAP + DGVTVAKE+E DP+EN+GA++V++ A KT+DLAGDGTT L + ++ +G+K+ Sbjct: 2 AAKELHFNVDARAALK--RGVDQLAEAVKVTLGPKGRNVVIDKKFGAPTVTKDGVTVAKEIELADPIENMGAQMVKEVATKTSDLAGDGTTTATVLAQAIFREGLKN 106
BLAST of EY720436 vs. ExPASy Swiss-Prot
Match: CH601_STRCO (60 kDa chaperonin 1 OS=Streptomyces coelicolor GN=groL1 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.590e-26 Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 255 AKDLHFNKDGYAMKKLHNGVNKLAYLVGVTLGPKGRNVVL*SKYGAPKIVNDGVTVAKEVESEDPVENIGAKLVRQAAAKTNDLAGDGTTHLLFLRKGLYLKGVKS 572 AK L F++D A + L GVNKLA V VT+GPKGRNVV+ K+GAP I NDGVT+A+EVE EDP EN+GA+LV++ A KTND+AGDGTT L + L +G+K+ Sbjct: 2 AKILKFDED--ARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVEVEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKN 105 The following BLAST results are available for this feature:
BLAST of EY720436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720436 ID=EY720436; Name=EY720436; organism=Citrus sinensis; type=EST; length=878bpback to top |