EY720433 | Citrus Genome Database

Overview


Name	EY720433
Unique Name	EY720433
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	885

Libraries


Library Name	Type
Sweet orange fruit, development stadium (4 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BD31B_ORYSJ (Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica GN=Os05g0446300 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.259e-22
Identity = 30/41 (73.17%), Postives = 38/41 (92.68%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AENDPHDGKRKCE LWPIF+I+HQ+S+YI++LYY+R EI +
Sbjct:   32 AENDPHDGKRKCEALWPIFRISHQKSRYIYDLYYRRKEISK 72

HSP 2 Score: 50.0618 bits (118), Expect = 3.259e-22
Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            SKELYEFCLDQG+ D NLIAKWKK
Sbjct:   71 SKELYEFCLDQGHADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BD31A_ORYSJ (Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.240e-22
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AEND HDGKRKCE LWPIF+I+HQRS+YI++LYY+R EI +
Sbjct:   32 AENDTHDGKRKCEALWPIFRISHQRSRYIYDLYYRRKEISK 72

HSP 2 Score: 51.6026 bits (122), Expect = 4.240e-22
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            SKELYEFCLDQGY D NLIAKWKK
Sbjct:   71 SKELYEFCLDQGYADRNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BD31C_ORYSJ (Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica GN=Os12g0149800 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.581e-21
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 HASGLSAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEI 135
            H+    AENDPHDG+RKCE LWPIFKI HQRS+Y+++LYY R EI
Sbjct:   26 HSKMREAENDPHDGRRKCEALWPIFKINHQRSRYLYDLYYNRKEI 70

HSP 2 Score: 48.1358 bits (113), Expect = 1.581e-21
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYEFCLDQG+ D NLIAKWKK
Sbjct:   71 SQELYEFCLDQGHADRNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_XENLA (Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.652e-17
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE DPH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  I R
Sbjct:   32 AETDPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISR 72

HSP 2 Score: 43.5134 bits (101), Expect = 2.652e-17
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELY++C+ +GY D NLIAKWKK
Sbjct:   71 SRELYDYCIREGYADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_RAT (Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 2.652e-17
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  I R
Sbjct:   32 AETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISR 72

HSP 2 Score: 45.0542 bits (105), Expect = 2.652e-17
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYE+C+ +GY D NLIAKWKK
Sbjct:   71 SRELYEYCIKEGYADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_HUMAN (Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 2.652e-17
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  I R
Sbjct:   32 AETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISR 72

HSP 2 Score: 45.0542 bits (105), Expect = 2.652e-17
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYE+C+ +GY D NLIAKWKK
Sbjct:   71 SRELYEYCIKEGYADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_GECJA (Protein BUD31 homolog OS=Gecko japonicus GN=BUD31 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.652e-17
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  I R
Sbjct:   32 AETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISR 72

HSP 2 Score: 45.0542 bits (105), Expect = 2.652e-17
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYE+C+ +GY D NLIAKWKK
Sbjct:   71 SRELYEYCIKEGYADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_BOVIN (Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.652e-17
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  I R
Sbjct:   32 AETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISR 72

HSP 2 Score: 45.0542 bits (105), Expect = 2.652e-17
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYE+C+ +GY D NLIAKWKK
Sbjct:   71 SRELYEYCIKEGYADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_BRABE (Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.580e-17
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E LWPIFKI HQ+S+YIF+L+Y+R  I R
Sbjct:   32 AETEPHEGKRKVEALWPIFKIHHQKSRYIFDLFYRRKAISR 72

HSP 2 Score: 42.743 bits (99), Expect = 7.580e-17
Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYE+CL +G  D NLIAKWKK
Sbjct:   71 SRELYEYCLKEGIADKNLIAKWKK 94

[Close]

BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_DANRE (Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.855e-17
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1

Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E+LWPIF++ HQRS+YIF+L+YKR  I R
Sbjct:   32 AETEPHEGKRKVESLWPIFRLHHQRSRYIFDLFYKRKAISR 72

HSP 2 Score: 41.5874 bits (96), Expect = 9.855e-17
Identity = 16/24 (66.67%), Postives = 20/24 (83.33%), Query Frame = 3

Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELY++C+  GY D NLIAKWKK
Sbjct:   71 SRELYKYCIRGGYADKNLIAKWKK 94

The following BLAST results are available for this feature:

BLAST of EY720433 vs. ExPASy Swiss-Prot

BLAST of EY720433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11


Match Name	E-value	Identity	Description
BD31B_ORYSJ	3.259e-22	73.17	Protein BUD31 homolog 2 OS=Oryza sativa subsp. jap...	[more]
BD31A_ORYSJ	4.240e-22	73.17	Protein BUD31 homolog 1 OS=Oryza sativa subsp. jap...	[more]
BD31C_ORYSJ	1.581e-21	68.89	Protein BUD31 homolog 3 OS=Oryza sativa subsp. jap...	[more]
BUD31_XENLA	2.652e-17	65.85	Protein BUD31 homolog OS=Xenopus laevis GN=bud31 P...	[more]
BUD31_RAT	2.652e-17	63.41	Protein BUD31 homolog OS=Rattus norvegicus GN=Bud3...	[more]
BUD31_HUMAN	2.652e-17	63.41	Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=...	[more]
BUD31_GECJA	2.652e-17	63.41	Protein BUD31 homolog OS=Gecko japonicus GN=BUD31 ...	[more]
BUD31_BOVIN	2.652e-17	63.41	Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 ...	[more]
BUD31_BRABE	7.580e-17	65.85	Protein BUD31 homolog OS=Branchiostoma belcheri PE...	[more]
BUD31_DANRE	9.855e-17	65.85	Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-703-009-D10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY720433 ID=EY720433; Name=EY720433; organism=Citrus sinensis; type=EST; length=885bp
CACGCGTCCGGCTTGTCAGCTGAAAATGATCCACATGATGGCAAGAGAAA
GTGTGAAACACTGTGGCCCATCTTCAAAATTGCGCATCAGAGGAGCCAGT
ACATATTTGAGCTTTATTACAAAAGGAATGAGATTCCAAGGAATTGTACG
AGTTCTGCTTGGATCAAGGATATGGTGACAGCAACTTAATCGCTAAGTGG
AAAAAGGTTCATACTTGCAGTTCTTTTATGAATAAATTATGCAAAGGAGT
GTCTTACTTATTCACCGTTTAGTGATTTTCTTTCTTCTTTGGTTCAGAAT
TTCAAGCTTATCCATGATTGGGACAATGTTGAAATCCAAAATTAAACAGT
CCTGATATCTGACTTGTTCATCTGCGTAACTCACTCTGCTAGTGCACTTT
TTAGCTTTTCTGGGACATGGGTTTTAACAAATATATTATTCAGTTCTTAA
CATATATATAGCTTTAGACCTCAATGATTTGTGAATATACTAATTAGATG
ACATCTAGTTGAATTACCTTTAGTGAAGCCTCTTTAATCTATTTCAATAG
AAATATATTTCTCCCTGATATACTTCATTTGAAATGCAGCCCGGATATGA
ACGACTCTGCTGGCTACCATGCATACAGCCAAGGGATCCCAGCGTTGGCA
CACATGTGTGTGGAGAATTCCTATCCCCGGAGGGGAAAGAACCTGTGGAG
TGTGTGCCTGGTGGGCTGTAGGGCCTGGCCCCTGGGGAATAATTGAATCA
CGTGGTCGACCCGTTCTTCCGGTGCGAGTTACCTTACTCCTAGAGGACGG
ATATGTCGAGGAGGGGGAACATGCGGGCTTCCCGACTGGCAAATTCGGGG
GTTGGGTGTGGGGAGGGGGGATGGTCGGGGGGGGA