EY720415

Overview
NameEY720415
Unique NameEY720415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3405 contig Csv1_Contig3405:753..1582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720415 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 4.079e-53
Identity = 126/239 (52.72%), Postives = 144/239 (60.25%), Query Frame = 3
Query:   93 SKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXXTTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXXKMGSVVHASISTVSVVLYFCCFVMGFWANP*HTLFGDLPH--QGTWHLHCHMCPCILDK*HHCHLFTPVLLNSVGLAGVFGMYAGRCVISWIFVFIKSSKNKG 803
            SK+LL ++ IGPAM+HPSET  KG  W DL +PGVKRAL+VGVG+QILQQ SGINGVLYYTPQILEQAGVG+                   TT +MLP+IAVAMRLMD+SGRR                        M S+VHA +STVSVVLYFC FVMGF   P        P   +G     C +   I D      L  PVLL S+GLAGVFGMYA  C ISW+FVFIK  + KG
Sbjct:  471 SKDLLKEHTIGPAMVHPSETT-KGSIWHDLHDPGVKRALVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMNSIVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSL--PVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKG 706          

HSP 2 Score: 92.0485 bits (227), Expect = 4.260e-18
Identity = 53/102 (51.96%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  538 SVLCYISVALSW-----GFGPIPNILCSEIFPTRVRGICIAICALVFWISDIIVTYSLQYCSTPXXXXXXXXXXXXXXXXXXXXXXXXXQKTKGMPLEXITE 828
            +VL  +SV L +     GFGP PNILCSEIFPTRVRGICIAICAL FWI DIIVTYSL                                +TKGMPLE ITE
Sbjct:  613 AVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITE 714          
BLAST of EY720415 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.827e-43
Identity = 106/228 (46.49%), Postives = 131/228 (57.46%), Query Frame = 3
Query:  123 GPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXXTTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXXKMGSVVHASISTVSVVLYFCCFVMGFWANP*HTLFGDLPHQGTWHLHCHMCPCILDK*HHCHLFT-PVLLNSVGLAGVFGMYAGRCVISWIFVFIKSSKNKG 803
            G AM+ P + AA G  W  L EPGVKRAL+VGVGIQILQQ SGINGVLYYTPQILE+AGV +                   TTLLMLP+I VAMRLMD+SGRR                        +  VV+A++ST  VVLYFC FVMG+   P + L  ++       L   +C  +         ++ PVLL+S+GL GVF +YA  CVISWIFV++K  + KG
Sbjct:  483 GSAMVPPEKIAASGPLWSALLEPGVKRALVVGVGIQILQQFSGINGVLYYTPQILERAGVDILLSSLGLSSISASFLISGLTTLLMLPAIVVAMRLMDVSGRRSLLLWTIPVLIVSLVVLVISELIHISKVVNAALSTGCVVLYFCFFVMGYGPIP-NILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKG 709          

HSP 2 Score: 91.2781 bits (225), Expect = 7.267e-18
Identity = 46/85 (54.12%), Postives = 52/85 (61.18%), Query Frame = 1
Query:  574 GFGPIPNILCSEIFPTRVRGICIAICALVFWISDIIVTYSLQYCSTPXXXXXXXXXXXXXXXXXXXXXXXXXQKTKGMPLEXITE 828
            G+GPIPNILCSEIFPTRVRG+CIAICA+VFWI DIIVTYSL    +                           +TKGMPLE IT+
Sbjct:  633 GYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITD 717          
BLAST of EY720415 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.123e-33
Identity = 87/218 (39.91%), Postives = 115/218 (52.75%), Query Frame = 3
Query:  162 GFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXXTTLLMLPSIAVAMRLMDISGRRXXXXXXXXXXXXXXXXXXXXXXXKMGSVVHASISTVSVVLYFCCFVMGFWANP*HTLFGDLPHQGTWHLHCHMCPCILDK*HHCHLFT----PVLLNSVGLAGVFGMYAGRCVISWIFVFIKSSKNKG 803
            G  W++L EPGVKRALMVGVG+QILQQ +GINGV+YYTPQILE+ GV                     TTLLMLP I V+MR + +S                           +G  ++A IST SV +Y  CFVMGF A P + L  ++       L   +C         C +      PV+L S+G+AGVFG+YA  C ++W+FV++K  + KG
Sbjct:  497 GPGWRELKEPGVKRALMVGVGLQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSMRSLMLS--------TIPILILSLVTLVIGSLVNLGGSINALISTASVTVYLSCFVMGFGAIP-NILCSEIFPTSVRGLCITICALTF---WICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKG 702          

HSP 2 Score: 84.3445 bits (207), Expect = 8.883e-16
Identity = 48/100 (48.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query:  529 SRLSVLCYISVALSWGFGPIPNILCSEIFPTRVRGICIAICALVFWISDIIVTYSLQYCSTPXXXXXXXXXXXXXXXXXXXXXXXXXQKTKGMPLEXITE 828
            S  SV  Y+S  +  GFG IPNILCSEIFPT VRG+CI ICAL FWI DIIVTY+L                                +TKGMPLE I+E
Sbjct:  612 STASVTVYLSCFVM-GFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKGMPLEVISE 710          
BLAST of EY720415 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 3.115e-11
Identity = 28/85 (32.94%), Postives = 42/85 (49.41%), Query Frame = 3
Query:  177 DLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVXXXXXXXXXXXXXXXXXXXTTLLMLPSIAVAMRLMDISGRR 431
            DL +P   ++L+VGVG+ +LQQ  G+NG+ +Y   I E AGV                       ++ +P   + + LMD SGRR
Sbjct:  258 DLFQPQYAKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAGVS-------------SKIGMIAMVVVQIPMTTLGVLLMDKSGRR 329          

HSP 2 Score: 36.965 bits (84), Expect = 3.115e-11
Identity = 17/54 (31.48%), Postives = 31/54 (57.41%), Query Frame = 1
Query:  541 VLCYISVALSWGFGPIPNILCSEIFPTRVRGICIAICALVFWISDIIVTYSLQY 702
            VL Y   + S G G IP ++ SEIFP  ++G   ++  +V W+   I++++  +
Sbjct:  370 VLVYTG-SFSLGMGGIPWVIMSEIFPIDIKGSAGSLVTVVSWVGSWIISFTFNF 422          
The following BLAST results are available for this feature:
BLAST of EY720415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MSSP2_ARATH4.079e-5352.72Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
MSSP1_ARATH3.827e-4346.49Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
MSSP3_ARATH6.123e-3339.91Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
ERDL5_ARATH3.115e-1132.94Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-B06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720415 ID=EY720415; Name=EY720415; organism=Citrus sinensis; type=EST; length=830bp
CACGCGTCCGAGTTTCTATGCATGGTGAGGATGTTCCTGTAGGAGGTGAG
GTCGTCCAGGCTGCTGCTTTGGTGAGTCAAGCGGCTCTTTGTTCCAAGGA
GCTTTTAGATCAAAATCCAATCGGACCAGCTATGATTCATCCATCTGAAA
CTGCAGCAAAAGGATTCAGTTGGAAGGATCTAGCTGAACCAGGAGTTAAA
CGTGCATTGATGGTGGGTGTGGGCATTCAAATACTTCAGCAGTTATCTGG
CATAAATGGGGTTCTCTACTACACTCCTCAAATTCTTGAGCAGGCAGGTG
TTGGAGTTCTTCTTTCAAATTTGGGCATTAGTTCAGCTTCAGCATCACTG
CTTATCAGTGGCATCACAACCTTATTGATGCTTCCATCTATAGCTGTAGC
CATGAGGCTCATGGATATTTCTGGCAGAAGGACTTTGCTGCTCAGCACAA
TCCCCATCTTAATAACATCTCTTGTTGTCCTAGTCCTGTCAAGTGTTATA
AAGATGGGTTCTGTTGTGCATGCATCAATCTCGACTGTCAGTGTTGTGTT
ATATTTCTGTTGCTTTGTCATGGGGTTTTGGGCCAATCCCTAACATACTC
TGTTCGGAGATCTTCCCCACCAGGGTACGTGGCATCTGCATTGCCATATG
TGCCCTTGTATTTTGGATAAGTGACATCATTGTCACCTATTCACTCCAGT
ACTGCTCAACTCCGTTGGGCTTGCTGGTGTTTTTGGTATGTACGCTGGTC
GTTGTGTCATATCATGGATATTCGTCTTCATCAAAAGTTCAAAAAACAAA
GGGCATGCCGCTTGAANTGATTACAGAATT
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