EY720372

Overview
NameEY720372
Unique NameEY720372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720372 vs. ExPASy Swiss-Prot
Match: ZN830_XENTR (Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11
Identity = 63/259 (24.32%), Postives = 112/259 (43.24%), Query Frame = 1
Query:   49 DAARKKAI--------FRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAI---KNIKAGATGNNTRVVSDAAKPEAGVDSSRSES----GSASQNAELE-------------NSAKLGKARPPS--VLPSNFFDNQEVKRPKTDSVKLVDPDSTKPSGV-----SAKTQALKSVVLENEMDELP-NGNAVHAEKGQPFKEHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIN 717
            DA +KK +         +AK      +KRI SPL +YN     +C VC++ +KS+  W AH   ++H E +   K  KA  +  + +V         G +    ES    G+  Q   L+             +SAK    + PS  +L  ++ D+ EV+  + ++V        KP+ +     ++    L +   E++M  +  +G+ + A+  +   E  + + +           ALPEGFFD+ +AD   R ++
Sbjct:    3 DAGKKKLVQQEELRRLMKAKQRRSCSKKRIESPLAKYNSLGHLLCVVCNIQIKSELLWPAHILGKQHKEKVAELKGSKANISSPSNKVQLHHIMKRKGSEPENQESKRIKGTEDQPTALKTKLPEGFFETEETSSAKHAAEKAPSLKLLAGDYEDDDEVEGEEYENVNEASTSLQKPAEIPLPPPTSSADRLPADFFESKMPLVSHSGSVLKADIQEKIVERKDNTAE-----------ALPEGFFDDPEADAKVRKVD 250          
BLAST of EY720372 vs. ExPASy Swiss-Prot
Match: ZN830_MOUSE (Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 59/238 (24.79%), Postives = 104/238 (43.70%), Query Frame = 1
Query:   64 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKA--GAT-GNNTRVVSDAAKPEA-GVDSSRSESGSASQNAELE----------NSAKLGKARPPSVLPSNFFDNQEVK-----RPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELPNGNAVHAEKGQPFK-EHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIN 717
            + + R K       KRI SP  +YN   Q  C +C+  +KS+  W  H   ++H E +  +K   GAT G +T  V  A K  A  V+S  ++   AS   +++          ++A+   ++P   L  ++ D +E +       + DS K +     K   +++  +   +V+  +  +  P    +    G   K E  EK  +   + A+    ALPEGFFD+ + D   R ++
Sbjct:   22 RRLMREKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELKGAKGATQGPSTGTVPQATKRRATDVESQDAKKAKASAGPQVQPSTSASSANLDAARAAPSKPGLGLLPDYDDEEEEEEEGGGEERRDSSKHLPDAQGKEHSLASPRETTSNVLPNDPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAE----ALPEGFFDDPEVDAKVRKVD 255          
The following BLAST results are available for this feature:
BLAST of EY720372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZN830_XENTR1.037e-1124.32Zinc finger protein 830 OS=Xenopus tropicalis GN=z... [more]
ZN830_MOUSE3.018e-1124.79Zinc finger protein 830 OS=Mus musculus GN=Znf830 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-E09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720372 ID=EY720372; Name=EY720372; organism=Citrus sinensis; type=EST; length=843bp
CCACGCGTCCGCGACGAATCCCTTTCGCTTCAATCTTCGTAAAAGATGGA
TGCAGCGCGGAAAAAGGCAATATTTCGCGCAAAGTTGAATGCTCAGAAGA
AGGAGAAGCGAATAAACTCTCCTCTTGTGAGGTATAACGAATTTGATCAA
CCTGTCTGTCGAGTTTGTGATGTTGTTTTGAAATCTGACTCCCAGTGGGA
TGCCCACCAAGCTTCTCGTAAACATCATGAGGCAATTAAAAACATCAAAG
CCGGTGCTACTGGAAATAATACTCGGGTGGTGAGTGATGCTGCGAAGCCT
GAGGCTGGTGTGGATTCTTCTAGAAGTGAAAGCGGTTCAGCGTCACAGAA
TGCAGAGCTTGAAAACTCAGCGAAATTGGGTAAAGCTCGCCCGCCTTCTG
TGCTTCCTTCGAATTTCTTTGATAATCAGGAGGTGAAGAGACCAAAAACT
GATTCTGTCAAGTTGGTGGATCCTGATTCAACCAAACCGTCTGGGGTTTC
TGCTAAAACTCAGGCATTGAAGTCAGTAGTCTTGGAAAATGAGATGGATG
AGCTGCCTAATGGTAATGCTGTACATGCAGAAAAGGGTCAGCCTTTCAAG
GAGCATCCAGAGAAATCAAAGCAGAATGCAGGTTCAGAAGCCAAGCAAAT
AAAGGGAGCTCTCCCTGAAGGCTTCTTTGATAATAAAGATGCTGATTTAC
TTGCACGTGGAATTAACCTGTTAACCAGATGTCAAGATGAGTACAGGAAT
ATGAAAAGTTGATCCAGAGGACTTGAACAGGTGGATGACCGTTANAAAAA
GAGGAGATGATGCTGCANAAATGATAGAAGAGATGAATCGTTG
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