EY720364

Overview
NameEY720364
Unique NameEY720364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720364_ssr144 microsatellite EY720364_ssr144:144..155. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: KAP1_ARATH (Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=AKN1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.328e-21
Identity = 48/94 (51.06%), Postives = 70/94 (74.47%), Query Frame = 2
Query:  233 MATVGNSTNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            ++TVGNSTNI   E  + +++R  LL+QKGCV+W+TGL+GSGKSTL  ++N+ LY  GKL YILD D +  GLN++L + A+   +NI +VG++
Sbjct:   72 LSTVGNSTNIKWHECSVEKVDRQRLLDQKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNRDLSFKAEDRAENIRRVGEV 165          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: KAPS_CATRO (Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus GN=AKN PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.616e-19
Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  224 IFVMATVGNSTNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            I    TVGNSTNI   +  + + ER   L Q+GCV+WITGL+GSGKSTL  ++++ L++ GKL+YILD D +  GLN +L + A+   +NI ++G++
Sbjct:  103 ILQTTTVGNSTNILWHKCAVEKSERQEPLQQRGCVIWITGLSGSGKSTLACALSRGLHAKGKLTYILDGDNVRHGLNSDLSFKAEDRAENIRRIGEV 199          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: KAP2_ARATH (Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=AKN2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 2
Query:  257 NIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            NI   ES + R +R  LL QKGCVVWITGL+GSGKST+  +++K L+  GKL+Y LD D +  GLN++L + A+  T+NI ++G++
Sbjct:   94 NIVWHESSICRCDRQQLLQQKGCVVWITGLSGSGKSTVACALSKALFERGKLTYTLDGDNVRHGLNRDLTFKAEHRTENIRRIGEV 179          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_CLOAB (Adenylyl-sulfate kinase OS=Clostridium acetobutylicum GN=cysC PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.540e-17
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 2
Query:  251 STNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            STN+  QE+ + R  R  +L QKG V+W TGL+GSGKST+  ++ K+LY  G L+Y+LD D L  GLN +LG+ ++  T+NI +V ++
Sbjct:    6 STNVVWQETKIKRQNREKMLKQKGAVLWFTGLSGSGKSTVASALEKKLYEMGYLTYLLDGDNLRYGLNSDLGFKSEDRTENIRRVSEV 93          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_OCEIH (Adenylyl-sulfate kinase OS=Oceanobacillus iheyensis GN=cysC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.682e-14
Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 2
Query:  242 VGNSTNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            +  STNI  Q++ + + +R +L N K  V+W TGL+GSGKSTL  ++ KEL+S    +Y LD D +  GLN+NLG+  +   +NI ++G++
Sbjct:    1 MNKSTNIVWQKTSVKKADRQHLNNHKSAVLWFTGLSGSGKSTLSSALEKELFSLETHTYHLDGDNVRHGLNKNLGFSPEDREENIRRIGEV 91          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_CLOK5 (Adenylyl-sulfate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=cysC PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.270e-13
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  251 STNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            STNI    + + R  R  LL Q G ++W TGL+GSGKST+   +   LY+ G+L+Y+LD D +  GLN NLG+  +   +NI +  ++
Sbjct:    5 STNISWHRALVDREMREKLLGQNGILIWFTGLSGSGKSTIASELEMRLYNMGRLTYLLDGDNVRHGLNSNLGFTKEDRIENIRRTAEV 92          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_BACV8 (Adenylyl-sulfate kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=cysC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.965e-13
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  281 MGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            + R ++  LL Q+G ++W+TGL+GSGKST+  ++ +EL+  G L  ILD D + SG+N NLG+ A+   +NI ++ +I
Sbjct:   14 LSRKDKEELLGQRGVMLWLTGLSGSGKSTIAIALERELHKRGLLCRILDGDNIRSGINNNLGFSAEDRVENIRRIAEI 91          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_STAES (Adenylyl-sulfate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.057e-13
Identity = 34/91 (37.36%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  242 VGNSTNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            +  S +I   +S + + +R +    K  V+W TGL+GSGKST+  ++ KEL++ GK +Y LD D +  GLN+NLG+  +  ++NI ++G++
Sbjct:    1 MSESNHITWHDSEVTKKQRQHKNGHKSAVIWFTGLSGSGKSTVSVALEKELFNEGKQTYRLDGDNVRHGLNKNLGFSPEDRSENIRRIGEV 91          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_STAEQ (Adenylyl-sulfate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.057e-13
Identity = 34/91 (37.36%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  242 VGNSTNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            +  S +I   +S + + +R +    K  V+W TGL+GSGKST+  ++ KEL++ GK +Y LD D +  GLN+NLG+  +  ++NI ++G++
Sbjct:    1 MSESNHITWHDSEVTKKQRQHKNGHKSAVIWFTGLSGSGKSTVSVALEKELFNEGKQTYRLDGDNVRHGLNKNLGFSPEDRSENIRRIGEV 91          
BLAST of EY720364 vs. ExPASy Swiss-Prot
Match: CYSC_LACPL (Adenylyl-sulfate kinase OS=Lactobacillus plantarum GN=cysC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.057e-13
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 2
Query:  251 STNIFCQESPMGRLERHNLLNQKGCVVWITGLTGSGKSTLPFSVNKELYSTGKLSYILDPDTLPSGLNQNLGWPAKKSTDNILKVGDI 514
            S NI   +S + + ER  L + K  V+W TGL+GSGKST+  +V K L+     SY+LD D +  GLN+NLG+ A+   +NI ++G++
Sbjct:    4 SDNITWHQSQVSKAERQALNHHKSVVLWFTGLSGSGKSTIANAVEKALFDQQVGSYVLDGDNMRFGLNKNLGFSAEDREENIRRIGEV 91          
The following BLAST results are available for this feature:
BLAST of EY720364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KAP1_ARATH1.328e-2151.06Adenylyl-sulfate kinase 1, chloroplastic OS=Arabid... [more]
KAPS_CATRO3.616e-1946.39Adenylyl-sulfate kinase, chloroplastic OS=Catharan... [more]
KAP2_ARATH8.906e-1850.00Adenylyl-sulfate kinase 2, chloroplastic OS=Arabid... [more]
CYSC_CLOAB7.540e-1746.59Adenylyl-sulfate kinase OS=Clostridium acetobutyli... [more]
CYSC_OCEIH2.682e-1441.76Adenylyl-sulfate kinase OS=Oceanobacillus iheyensi... [more]
CYSC_CLOK52.270e-1340.91Adenylyl-sulfate kinase OS=Clostridium kluyveri (s... [more]
CYSC_BACV82.965e-1342.31Adenylyl-sulfate kinase OS=Bacteroides vulgatus (s... [more]
CYSC_STAES5.057e-1337.36Adenylyl-sulfate kinase OS=Staphylococcus epidermi... [more]
CYSC_STAEQ5.057e-1337.36Adenylyl-sulfate kinase OS=Staphylococcus epidermi... [more]
CYSC_LACPL5.057e-1342.05Adenylyl-sulfate kinase OS=Lactobacillus plantarum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-E01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720364 ID=EY720364; Name=EY720364; organism=Citrus sinensis; type=EST; length=951bp
CTCCCCTCTTCCCTCCTCCCCCTCCCACCTCAGAAAATAATGACGGTCGC
ATTATAAGTACAGGTCCAGGAATTCCCGAGGTGGACCACGCGATCGCTCT
AAATGACAACTTCACTCCCTCTAGTTTCGGTTTCCATTAACGTAATAAAT
AAATACGTCCTCTCTCTGGCAGTTGCAAACAACCCACGAAGCTCTAATAA
AAAGGGGGAACTGAACATATAACATTTTTGTGATGGCTACTGTCGGAAAT
TCGACTAATATATTTTGCCAAGAATCTCCAATGGGGAGGCTCGAAAGGCA
CAACCTTCTCAACCAAAAGGGATGTGTTGTATGGATCACGGGTCTTACTG
GATCGGGGAAAAGTACGCTACCATTTTCGGTTAACAAGGAACTTTATTCT
ACGGGAAAGCTGTCTTATATCCTTGACCCAGATACCCTTCCATCTGGACT
AAATCAAAATCTCGGTTGGCCTGCAAAAAAGTCAACTGACAATATACTAA
AGGTTGGGGACATACCACACTCCTCCGCGATCCCTGTCTAATCCGCCTCG
CCCAGCTCATATCGCCGTCACCCAACATACCCGAATGTTGCCTCCGAACG
CTGCGAAAACTCACAGATCAGCGGAGGGCACAAAGACTATGGCCCGGCGC
ATACCCTCAGCGCGCGCATGAACAAGCGTCGACAGTGTGTCGCGCGTCCA
GCGGAGCGTATGAGGGTGCCCCCGCGTCAGACCCACGCCCCCGCCCCCCC
CCAACCCGCACCCCACCTCAGAATCATCCACCCCACAAACCCCACCCACC
CCACCCCCCACACAGGAATAAAACNTTCAGTAAATTCAGATCAATAATAA
ACAAACAATGCAGAATTCTAGGATATTATATCTGTCTCGTACTCGCTTGT
TACGCAGGCGTCCGTGAGGCCCCCCCCCACCCGTGGTCCGGACGGCGGGA
A
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