EY720346

Overview
NameEY720346
Unique NameEY720346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21
Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  380 GVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQP-------------LKEDSTGNKQ 700
            GV V+      +LLR V PY+ +GYPNL  V++L+Y +GY  V++Q  PL+DN+IIE+ LGKYG+IC+ D++HEI  VGP  K+  NF   F    P             ++  STGN++
Sbjct:  120 GVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNRE 239          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 2
Query:  365 RKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQPL 673
            R+   GV ++       +LR+V PYV YGYPNL  VKELIY +GY  ++ Q   LTDNSI++Q LGK+G+IC+ D++HEI  VGP  KE  NF   F  + PL
Sbjct:  109 RQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPL 211          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.809e-20
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 2
Query:  365 RKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQPL 673
            R+   GV ++       +LR+V PYV YGYPNL  VKELIY +G+  ++ Q   LTDNSI++Q LGK+G+IC+ D++HEI  VGP  KE  NF   F  + PL
Sbjct:  111 RQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPL 213          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.809e-20
Identity = 51/103 (49.51%), Postives = 66/103 (64.08%), Query Frame = 2
Query:  365 RKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQPL 673
            R+   GV ++       +LR+V PYV YG+PNL  VKELIY +GY  ++ Q   LTDNSI+EQ LGK+G+IC  D++HEI  VGP  KE  NF   F  + PL
Sbjct:  109 RQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPL 211          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.031e-20
Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 2
Query:  380 GVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQP 670
            GV V+      ++++ V P+V YGYPNL  VKELIY +GY  V++Q   LTDNSIIE+ LGKYG+IC+ D++HEI  VGP  K+  NF   F    P
Sbjct:  119 GVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNP 215          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  365 RKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQP 670
            R+ + GV V+       LLR + PYV +GYPN   + +L+Y +GYA V     P+TDN+I+EQ+LGK+ +ICL D+ HEIA VGP  KE  NF   F    P
Sbjct:  111 RQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNP 212          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL7L_MOUSE (60S ribosomal protein L7-like 1 OS=Mus musculus GN=Rpl7l1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17
Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  275 KSTLLFIISIERYSEVNLTDYHDSL*P*IERKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNF 643
            K  L F+I +ER   V+L      +   +++ FS GV V+      ++LR V PYV +G+PNL  V+ELI  +G A ++ +  PLTDN++IE+ LG++G+ICL D++HEIA  G   +EV +F
Sbjct:   84 KHPLAFVIRMERIEGVSLLVKSTIMKLGLKKLFS-GVFVKVTPQSVRMLRTVEPYVTWGFPNLKSVRELILKRGQAKINNKTVPLTDNTVIEEHLGRFGVICLEDLIHEIAFPGKHFQEVSSF 205          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL7L_PONAB (60S ribosomal protein L7-like 1 OS=Pongo abelii GN=RPL7L1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17
Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 2
Query:  275 KSTLLFIISIERYSEVNLTDYHDSL*P*IERKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFN 658
            K +L F++ IER   V+L          +++ FS GV V+      K+LR V PYV +G+PNL  V+ELI  +G A V  +  PLTDN++IE+ LGK+G+ICL D++HEIA  G   +E+  F   F+
Sbjct:   84 KHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFS-GVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFH 210          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL7L_HUMAN (60S ribosomal protein L7-like 1 OS=Homo sapiens GN=RPL7L1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.872e-17
Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  275 KSTLLFIISIERYSEVNLTDYHDSL*P*IERKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEV 634
            K +L F++ IER   V+L          +++ FS GV V+      K+LR V PYV +G+PNL  V+ELI  +G A V  +  PLTDN++IE+ LGK+G+ICL D++HEIA  G   +E+
Sbjct:   84 KHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFS-GVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEI 202          
BLAST of EY720346 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.445e-17
Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = 2
Query:  275 KSTLLFIISIERYSEVNLTDYHDSL*P*IERKFSFGVSVQNIDGMYKLLRKV*PYVRYGYPNLVYVKELIY*KGYATVHRQNNPLTDNSIIEQTLGKYGLICLGDIVHEIAHVGPLLKEVVNFPGSFNTEQPLKEDSTGNKQPFND 712
            KS L+FII I+  ++++           ++  F+ GV  +  D +++ L KV PYV YGYPN   VK+LIY KG   +     PLTDN+IIEQ LG++ ++ + D+V+EIA VG   +EV+ F G     +P+ +     KQ F++
Sbjct:   84 KSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFT-GVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSE 228          
The following BLAST results are available for this feature:
BLAST of EY720346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
RL7_YARLI8.122e-2142.5060S ribosomal protein L7 OS=Yarrowia lipolytica GN... [more]
RL73_ARATH8.122e-2149.5160S ribosomal protein L7-3 OS=Arabidopsis thaliana... [more]
RL74_ARATH1.809e-2048.5460S ribosomal protein L7-4 OS=Arabidopsis thaliana... [more]
RL72_ARATH1.809e-2049.5160S ribosomal protein L7-2 OS=Arabidopsis thaliana... [more]
RL7_NEUCR4.031e-2050.5260S ribosomal protein L7 OS=Neurospora crassa GN=r... [more]
RL7_CAEEL1.297e-1846.0860S ribosomal protein L7 OS=Caenorhabditis elegans... [more]
RL7L_MOUSE1.098e-1741.4660S ribosomal protein L7-like 1 OS=Mus musculus GN... [more]
RL7L_PONAB1.434e-1742.1960S ribosomal protein L7-like 1 OS=Pongo abelii GN... [more]
RL7L_HUMAN1.872e-1743.3360S ribosomal protein L7-like 1 OS=Homo sapiens GN... [more]
RL71_ARATH2.445e-1737.6760S ribosomal protein L7-1 OS=Arabidopsis thaliana... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-C01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720346 ID=EY720346; Name=EY720346; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTTCGCGCTAAATGACACGTCAATCCCTCGATTTTCTGTGTCCA
TTAACACATTAAGTAAATAAGACCTCTCTCTGACGGTTNGAAACAAACCA
GGAAACCCCAATAAAAATGGGGAAATTATGATATTGGATTTAAGAGAAGG
AAAATGATGGAGATTGATATCAATAATATCTAGCAAGATATCCCACATGT
GAGGGATGAAAAGTTGAACCTTATCACAATGAAGGATGTGTGGAATGGGT
TCAAGAGTCGTGATCGGATCGGGGAAATCTACGTTGCTTTTTATTATAAG
CATAGAACGTTATTCTGAGGTAAATCTGACTGACTACCATGATTCTCTAT
AACCTTAGATTGAGAGAAAATTTTCATTCGGTGTCTCTGTCCAGAACATT
GATGGTATGTATAAATTGCTGCGGAAAGTGTAGCCATACGTCAGATATGG
ATATCCTAATCTTGTATATGTGAAGGAGCTCATCTACTAGAAGGGTTATG
CAACTGTACACAGGCAAAATAATCCCCTCACAGACAATAGCATTATTGAA
CAGACGTTGGGGAAATATGGGCTTATATGCCTTGGAGATATAGTACATGA
GATAGCCCATGTGGGTCCCCTTTTAAAAGAGGTCGTCAACTTTCCTGGGT
CTTTTAACACTGAACAACCCCTGAAGGAGGATTCTACGGGGAATAAACAA
CCATTCAACGACCGGTGGAAAAAGCTGCAAACCCTCTAGGAAAAAATCCC
TCGAATTATCACCTCAGATGAATGAGGACGTTGGAGTCCGCGCCCAGCCC
AATGAGAAAACTGGAATCACCGACGCGCCCCTGGAACAAATGGGTCCGGC
TGAGGAAACATATGCTGTGGTGCCTATGTTAGCCATATTGGAAGGTCGCC
TCAGCCCGCGA
back to top