EY720264

Overview
NameEY720264
Unique NameEY720264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11169 contig Csv1_Contig11169:1..905. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 5.417e-95
Identity = 154/197 (78.17%), Postives = 172/197 (87.31%), Query Frame = 2
Query:  167 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MKVIDKIQ      K  FSFEFFPPKTEDGV+NLFERMDRMVA+ P FCDITWGAGGSTADLTLDIA+RMQN +CVE+MMHLTCTNMPVEKIDHAL+TI+SNGIQNVLALRGDPPHGQDKFVQ++ GF CALD V H+RS YGDYFGITVAGYPE HPD +G +G+A NE+YQS L YLKKK+D GA LI+TQL ++
Sbjct:    1 MKVIDKIQSLADEGKTAFSFEFFPPKTEDGVDNLFERMDRMVAYGPTFCDITWGAGGSTADLTLDIASRMQNVVCVESMMHLTCTNMPVEKIDHALETIRSNGIQNVLALRGDPPHGQDKFVQVEGGFDCALDLVNHIRSKYGDYFGITVAGYPEAHPDVIGENGLASNEAYQSDLEYLKKKIDAGADLIVTQLFYD 197          

HSP 2 Score: 40.4318 bits (93), Expect = 5.417e-95
Identity = 20/39 (51.28%), Postives = 22/39 (56.41%), Query Frame = 1
Query:  772 LSLGNDCRQIGITCPIVPGKNAPGY*YGLLAPEGLCQPK 888
            L   NDCRQIGI+CPIVPG        G L   G C+ K
Sbjct:  202 LKFVNDCRQIGISCPIVPGIMPINNYRGFLRMTGFCKTK 240          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.009e-93
Identity = 152/197 (77.16%), Postives = 171/197 (86.80%), Query Frame = 2
Query:  167 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MKV+DKI+      +  FSFEFFPPKTEDGVENLFERMDR+V++ P FCDITWGAGGSTADLTL+IA+RMQN ICVETMMHLTCTNMP+EKIDHAL+TI+SNGIQNVLALRGDPPHGQDKFVQ++ GFACALD V H+RS YGDYFGITVAGYPE HPD +  DG+A  ESYQS L YLKKKVD GA LI+TQL ++
Sbjct:    1 MKVVDKIKSVTEQGQTAFSFEFFPPKTEDGVENLFERMDRLVSYGPTFCDITWGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAYLKKKVDAGADLIVTQLFYD 197          

HSP 2 Score: 40.0466 bits (92), Expect = 1.009e-93
Identity = 20/39 (51.28%), Postives = 21/39 (53.85%), Query Frame = 1
Query:  772 LSLGNDCRQIGITCPIVPGKNAPGY*YGLLAPEGLCQPK 888
            L   NDCRQIGI CPIVPG        G L   G C+ K
Sbjct:  202 LKFVNDCRQIGINCPIVPGIMPISNYKGFLRMAGFCKTK 240          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 4.973e-93
Identity = 150/197 (76.14%), Postives = 171/197 (86.80%), Query Frame = 2
Query:  167 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MKVI+KI E     +  FSFE+FPPKTE+GVENLFERMDRMVAH P+FCDITWGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKIDHAL+TIKSNGIQNVLALRGDPPHGQDKFVQ++ GFACALD V+H+R+ YGDYFGITVAGYPE HPD +  +G A  E+Y + L YLK+KVD GA LI+TQL ++
Sbjct:    1 MKVIEKILEAAGDGRTAFSFEYFPPKTEEGVENLFERMDRMVAHGPSFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAYSNDLAYLKRKVDAGADLIVTQLFYD 197          

HSP 2 Score: 41.9726 bits (97), Expect = 4.973e-93
Identity = 21/39 (53.85%), Postives = 22/39 (56.41%), Query Frame = 1
Query:  772 LSLGNDCRQIGITCPIVPGKNAPGY*YGLLAPEGLCQPK 888
            L   NDCRQIGITCPIVPG        G L   G C+ K
Sbjct:  202 LKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 240          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 5.954e-91
Identity = 150/197 (76.14%), Postives = 168/197 (85.28%), Query Frame = 2
Query:  167 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MKVI+KIQE  A  + VFSFE+FPPKTE+G++NLFERMDRMVAH P FCDITWGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKID AL TIKSNGIQNVLALRGDPPHGQDKFVQ+  GFACALD V+H+R+ YGDYFGITVAGYPE HPD +     A  E+Y + L YLK+KVD GA LIITQL ++
Sbjct:    1 MKVIEKIQEAAADGRTVFSFEYFPPKTEEGLDNLFERMDRMVAHGPNFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDDALTTIKSNGIQNVLALRGDPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQSTEGATPEAYSNDLAYLKQKVDAGADLIITQLFYD 197          

HSP 2 Score: 41.9726 bits (97), Expect = 5.954e-91
Identity = 21/39 (53.85%), Postives = 22/39 (56.41%), Query Frame = 1
Query:  772 LSLGNDCRQIGITCPIVPGKNAPGY*YGLLAPEGLCQPK 888
            L   NDCRQIGITCPIVPG        G L   G C+ K
Sbjct:  202 LKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 240          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR2_YEAST (Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae GN=MET13 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 3.049e-44
Identity = 92/200 (46.00%), Postives = 128/200 (64.00%), Query Frame = 2
Query:  167 MKVIDKI-QEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMV-AHNPAFCDITWGAGGST-ADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MK+ +K+ Q +  S K  +SFE+F PKT  GV+NL++RMDRM  A  P F DITW AGG   + L+ D+    Q+ + +ET MHLTCTNMP+  ID AL+    +G QN+LALRGDPP   + +  ++ GF  A D +K+++S YGD+F I VAGYPE HP+         N+  +  L YLK+K+D G   IITQ+ ++
Sbjct:    1 MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGGRLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRDAENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPE-------LPNKDVKLDLEYLKQKIDAGGDFIITQMFYD 193          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.199e-40
Identity = 91/198 (45.96%), Postives = 124/198 (62.63%), Query Frame = 2
Query:  167 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHN-PAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MK+ DK+      +KV +S+EFFPPKT  GV+NL+ R+DRM     P F D+TWGAGG++++LT  I N +Q    V+T MHLTCTNM  E ID AL+     G +N+LALRGDP    D + + +SGF  A D V+++R+ Y D F I VAGYPEG+     PD     +     + +LK KVD GA  I+TQ+ ++
Sbjct:    1 MKISDKLLHPDWKEKVTYSYEFFPPKTSTGVQNLYNRIDRMKTWGRPMFVDVTWGAGGTSSELTPGIVNVIQTDFEVDTCMHLTCTNMSTEMIDAALKRAHETGCRNILALRGDPVKDTD-WTEGESGFRYASDLVRYIRTHYNDEFCIGVAGYPEGY----SPD-----DDIDESIKHLKLKVDEGADFIVTQMFYD 188          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR1_YEAST (Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae GN=MET12 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.914e-38
Identity = 85/181 (46.96%), Postives = 114/181 (62.98%), Query Frame = 2
Query:  221 SFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD--KFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            S EFFPPKTE G  NL ERM RM A +P F  +TWGAGG+TA+ TL +A+  Q T+ +   MHLTCTN     ID AL    + GI+N+LALRGDPP G+D       +S F  A+D V++++ +YGD F + VA YPEGH +    +     +     L+YLK+KV+ GA  +ITQL ++
Sbjct:   16 SLEFFPPKTELGTRNLMERMHRMTALDPLFITVTWGAGGTTAEKTLTLASLAQQTLNIPVCMHLTCTNTEKAIIDDALDRCYNAGIRNILALRGDPPIGEDWLDSQSNESPFKYAVDLVRYIKQSYGDKFCVGVAAYPEGHCE---GEAEGHEQDPLKDLVYLKEKVEAGADFVITQLFYD 193          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR2_SCHPO (Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe GN=met11 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 7.273e-38
Identity = 85/198 (42.93%), Postives = 124/198 (62.63%), Query Frame = 2
Query:  167 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHN-PAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            MK++D I +K+ +    +SFE+FPPKT  G+ENL  R+ RM  +  P F  +TWG  GSTA++++ +A  ++    +   +HLTCTN+    ID AL+T K  GI+N+LALRGDPP   D +    S F  A+D V+++R  YGDYF I VA YPEGH D+  P+    ++     + +L +KV+ GA  IITQ+ +E
Sbjct:    1 MKIVDLI-DKIPNGNAFYSFEYFPPKTTVGLENLSSRITRMSRNMMPLFSSVTWGTAGSTAEVSIYLAKMLEQHHKIPACLHLTCTNVDKAIIDKALETAKEYGIRNILALRGDPPLNSDHWEGKVSEFEHAVDLVRYIREKYGDYFCIGVAAYPEGHVDSNVPE---LSKDPLRDIPFLIEKVEAGADFIITQIFYE 194          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.990e-37
Identity = 81/197 (41.12%), Postives = 116/197 (58.88%), Query Frame = 2
Query:  179 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            DK++ ++ S    FS EFFPP+T +G  NL  R DRM A  P F D+TW   G         ++ IA+   N   +ET++H+TC    +E+I   L   K  G++N++ALRGDP    D++ + + GF  A+D VKH+RS +GDYF + VAGYP+GHP+           S+++ L +LK+KV  GA  IITQL  E
Sbjct:   47 DKMRRRMESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLFIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCCQRLEEITGHLHKAKQLGLKNIMALRGDPI--GDQWEEEEGGFNYAVDLVKHIRSEFGDYFDLCVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFE 232          

HSP 2 Score: 28.1054 bits (61), Expect = 4.990e-37
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  790 CRQIGITCPIVPG 828
            C  +GITCPIVPG
Sbjct:  243 CTDMGITCPIVPG 255          
BLAST of EY720264 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 8.468e-37
Identity = 80/197 (40.61%), Postives = 116/197 (58.88%), Query Frame = 2
Query:  179 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQSGFACALDRVKHMRSAYGDYFGITVAGYPEGHPDTMGPDGVAXNESYQSGLLYLKKKVDGGAHLIITQLCHE 757
            +K++ ++ S    FS EFFPP+T +G  NL  R DRM A  P + D+TW   G         ++ IA+   N   +ET++H+TC    +E+I   L   K  G++N++ALRGDP    D++ + + GF  A+D VKH+RS +GDYF I VAGYP+GHP+           S+++ L +LK+KV  GA  IITQL  E
Sbjct:   47 EKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIG--DQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFE 232          

HSP 2 Score: 28.1054 bits (61), Expect = 8.468e-37
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  790 CRQIGITCPIVPG 828
            C  +GITCPIVPG
Sbjct:  243 CTDMGITCPIVPG 255          
The following BLAST results are available for this feature:
BLAST of EY720264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
MTHR2_ARATH5.417e-9578.17Methylenetetrahydrofolate reductase 2 OS=Arabidops... [more]
MTHR1_ARATH1.009e-9377.16Methylenetetrahydrofolate reductase 1 OS=Arabidops... [more]
MTHR1_MAIZE4.973e-9376.14Methylenetetrahydrofolate reductase 1 OS=Zea mays ... [more]
MTHR_ORYSJ5.954e-9176.14Probable methylenetetrahydrofolate reductase OS=Or... [more]
MTHR2_YEAST3.049e-4446.00Methylenetetrahydrofolate reductase 2 OS=Saccharom... [more]
MTHR1_SCHPO1.199e-4045.96Methylenetetrahydrofolate reductase 1 OS=Schizosac... [more]
MTHR1_YEAST1.914e-3846.96Methylenetetrahydrofolate reductase 1 OS=Saccharom... [more]
MTHR2_SCHPO7.273e-3842.93Methylenetetrahydrofolate reductase 2 OS=Schizosac... [more]
MTHR_MACFA4.990e-3741.12Methylenetetrahydrofolate reductase OS=Macaca fasc... [more]
MTHR_HUMAN8.468e-3740.61Methylenetetrahydrofolate reductase OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-B10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720264 ID=EY720264; Name=EY720264; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGGCTCACCTCACACACCCACTCTCTTTTACTTTCATCTCG
CATCCATTCTTTCCATTTTTCTTTGTCATAAATCACCCTCGCAGATCTGA
ACTCAACCGACAACTCACTCGTAAACGACCTGTCGGTGGCAGCAGTAGCT
ACTCTCCGAACCAAAAATGAAGGTAATAGACAAGATTCAAGAGAAAGTAG
CCTCCGACAAGGTCGTCTTCTCCTTCGAATTCTTCCCGCCGAAGACGGAA
GATGGCGTGGAGAACTTGTTCGAGCGGATGGACCGCATGGTGGCCCACAA
CCCGGCATTCTGCGACATCACGTGGGGGGCGGGTGGCTCCACGGCCGATC
TGACTCTCGACATCGCGAACAGGATGCAGAACACGATATGCGTCGAGACG
ATGATGCATTTGACGTGCACGAACATGCCCGTCGAGAAGATCGATCACGC
TCTTCAGACTATTAAGTCCAACGGCATCCAGAACGTTCTCGCTCTTCGCG
GCGATCCTCCTCACGGTCAGGATAAGTTCGTTCAGATCCAGAGTGGCTTC
GCCTGCGCTCTTGATCGCGTGAAACATATGAGGTCTGCTTATGGTGATTA
CTTTGGCATCACTGTTGCTGGTTACCCAGAGGGACATCCGGATACCATGG
GACCTGATGGCGTGGCCANTAATGAATCATATCAAAGTGGTCTTCTTTAT
CTGAAGAAAAAGGTGGATGGTGGTGCACATCTAATTATCACCCAACTATG
CCATGAATACTGACCTGTGGCTTAAGTTTGGGGAATGACTGTCGCCAAAT
TGGAATAACCTGCCCCATTGTGCCTGGGAAGAATGCGCCTGGATACTAAT
ACGGTCTCTTGGCCCCGGAGGGGCTTTGCCAACCAAAATTCCACCCCACT
TACTGGT
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