EY720262

Overview
NameEY720262
Unique NameEY720262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:51..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 464.922 bits (1195), Expect = 6.342e-131
Identity = 234/243 (96.30%), Postives = 234/243 (96.30%), Query Frame = 1
Query:  112 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKGGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARP VKLFNAVAAEDLIVKGGRVGGVVTNWA VSMNHDTQSCMDP  MEAKVVVSSCGHDGPFGATG KR
Sbjct:    9 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR 251          

HSP 2 Score: 25.0238 bits (53), Expect = 6.342e-131
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  846 SIGMIEEVPXMK 881
            SIGMIEEVP MK
Sbjct:  254 SIGMIEEVPGMK 265          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.943e-104
Identity = 187/228 (82.02%), Postives = 203/228 (89.04%), Query Frame = 1
Query:  154 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKGGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSK 837
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWLGGQLFS MVVRKPAH+FLDELGI+YDEQDNYVVIKHAALFTSTIMSKLLARP VKLFNAVAAEDLIVKGGRVGGVVTNWA VSMNHDTQSCMDP  MEAKVVVSSCGHDGPFGATG K
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 246          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 4.191e-99
Identity = 182/241 (75.52%), Postives = 205/241 (85.06%), Query Frame = 1
Query:  121 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKGGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDEQD YVV+KHAALFTSTIMSKLLARP VKLFNAVAAEDLIVKG RVGGVVTNWA V+ NH TQSCMDP  MEAK+VVSSCGHDGPFGATG KR
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKR 244          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.648e-95
Identity = 181/249 (72.69%), Postives = 201/249 (80.72%), Query Frame = 1
Query:  127 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKGGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWLGGQLFSAMVVRKPAH+FLDELG+ YDE ++YVVIKHAALFTST+MS LLARP VKLFNAVA EDLIV+GGRVGGVVTNWA VSMNHDTQSCMDP  MEAKVVVSSCGHDGPFGATG KR
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR 250          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.822e-94
Identity = 177/247 (71.66%), Postives = 199/247 (80.57%), Query Frame = 1
Query:  127 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKGGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWLGGQLFSAMVVR+PAH+FLDELG+ YDE ++YVV+KHAALFTST+MS+LLARP VKLFNAVA EDLIV+ GRVGGVVTNWA VSMNHDTQSCMDP  MEAKVVVSSCGHDGPFGATG KR
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR 247          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.960e-65
Identity = 126/207 (60.87%), Postives = 159/207 (76.81%), Query Frame = 1
Query:  241 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKGG-----RVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWLGGQLFSAMVVRKPA +FL+E+G+ Y+++ +YVV+KHAALFTST+M++ LA P VKLFNA A EDLIVK G     R+ GVVTNW  VS+NH  QSCMDP  + A +VVS+ GHDGPFGA   KR
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKR 243          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 6.322e-63
Identity = 121/194 (62.37%), Postives = 146/194 (75.26%), Query Frame = 1
Query:  274 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVK----GGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWLGGQLFSAM++RKPA  FL E+G+ Y+++ NYVV+KHAALFTSTIMSK+L  P +KLFNA   EDLI +    G R+ GVVTNW  VSM+HD QSCMDP  + A +++S+ GHDGP GA   KR
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKR 237          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.469e-61
Identity = 121/194 (62.37%), Postives = 143/194 (73.71%), Query Frame = 1
Query:  274 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVK----GGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWLGGQLFSAMV+RKPA  FL E+G+ Y+++ NYVV+KHAALFTSTIMSK+L  P  KLFNA   EDLI +    G R+ GVVTNW  VSM+HD QSCMDP  + A +V+S+ GHD P GA   KR
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKR 241          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.728e-61
Identity = 121/226 (53.54%), Postives = 154/226 (68.14%), Query Frame = 1
Query:  196 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVKG-------GRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV RKPA  FLD++G+ Y+++ N+VV+KHAALFTST++SK+LA P VK+FNA A EDLI+K         R+ G VTNW  VS+NHD QSCMDP  + A +V S  GHDGPFGA   KR
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKR 249          
BLAST of EY720262 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 7.728e-61
Identity = 118/197 (59.90%), Postives = 149/197 (75.63%), Query Frame = 1
Query:  274 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--QDNYVVIKHAALFTSTIMSKLLARPXVKLFNAVAAEDLIVK-----GGRVGGVVTNWAXVSMNHDTQSCMDPXCMEAKVVVSSCGHDGPFGATGSKR 840
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R+PA +FL+ELG+ Y+E    NYVV+KHA+LFTST+MSK+L+ P VKLFNA A EDLI +       ++ GVV NW  V+++HD  SCMDP  + A V++S+ GHDGPFGA  +KR
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKR 244          
The following BLAST results are available for this feature:
BLAST of EY720262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
THI4_CITSI6.342e-13196.30Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL1.943e-10482.02Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH4.191e-9975.52Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE1.648e-9572.69Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.822e-9471.66Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO3.960e-6560.87Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX6.322e-6362.37Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH3.469e-6162.37Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA7.728e-6153.54Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_ASPOR7.728e-6159.90Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-B08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720262 ID=EY720262; Name=EY720262; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTC
TAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAGCCATGG
CTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTT
GACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCA
ACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTT
CTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCC
ATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGATCACTTA
TGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTT
GTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAA
CAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTC
TGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCA
TCGACTACGATGAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTG
TTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCANCGTCAAGCT
CTTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTG
GTGGTGTGGTGACCAACTGGGCGTNGGTGTCAATGAATCACGATACACAG
TCTTGCATGGATCCCANNTGTATGGAAGCGAAGGTGGTTGTGAGCTCTTG
TGGCCATGATGGGCCTTTTGGGGCCACTGGNAGTAAGAGGTNGANAGTAT
CGGAATGATTGAGGAAGTGCCTGNAATGAAGGACTGGACA
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