EY720148

Overview
NameEY720148
Unique NameEY720148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 47/118 (39.83%), Postives = 65/118 (55.08%), Query Frame = 2
Query:   59 QSFAYANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECSLDA---SGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            ++F +A QLA  ++LPM +++  EL + EI+ K GPGA +  S +AAQL TKN + P       R      V+ C+L         RLYS+  V K    N DGV V PL+ + QDKV
Sbjct:   14 EAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKV 131          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 2
Query:   59 QSFAYANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECSLDA---SGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            ++F +A QLA  ++LPM ++   EL + EI+ K GPGA +  S +AAQL TKN + P       R      V+ C+L         RLYS+  V K+   N DGV + P++ + QDKV
Sbjct:   14 EAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKV 131          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13
Identity = 47/118 (39.83%), Postives = 63/118 (53.39%), Query Frame = 2
Query:   59 QSFAYANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECS---LDASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            ++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S IA+ L TKN D P       R   +  ++ CS   L      RLY +  V K+   N DGV V PL  + QDKV
Sbjct:   18 EAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKV 135          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13
Identity = 47/118 (39.83%), Postives = 63/118 (53.39%), Query Frame = 2
Query:   59 QSFAYANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECS---LDASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            ++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S IA+ L TKN D P       R   +  ++ CS   L      RLY +  V K+   N DGV V PL  + QDKV
Sbjct:   18 EAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKV 135          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 47/114 (41.23%), Postives = 61/114 (53.51%), Query Frame = 2
Query:   71 YANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECS---LDASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            +A QL   ++LPM ++T  EL + EI+ K GPGA L  S IA+ L TKN D P       R   +  ++ CS   L      RLY + SV K+   N DGV V PL  + QDKV
Sbjct:   21 FAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKV 134          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 2
Query:   53 KRQSFAYANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECSLD---ASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            + ++  +A  LA  ++LPM +++  EL + E++ K GPGA +  S +AAQL T N + P       R      V++C L+     G  RLY +  V K+   N DGV + PL+ + QDKV
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKV 122          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 2
Query:   53 KRQSFAYANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVEC---SLDASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            + ++F +A QLA  ++LPM +++  EL + E++ K G GA +  + +AAQLLT N +         R   +  ++EC   +L   G +RLY +  V K+   N DGV + PL  + QDKV
Sbjct:   14 EEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKV 133          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 46/114 (40.35%), Postives = 61/114 (53.51%), Query Frame = 2
Query:   71 YANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECS---LDASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            +A QL   ++LPM ++T  EL + EI+ K GPGA L  S IA+ L TKN + P       R   +  ++ CS   L      RLY + SV K+   N DGV V PL  + QDKV
Sbjct:   21 FALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKV 134          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   74 ANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECS---LDASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            A +LA  ++LPM +++  EL + E++ K GPGA +  S +AAQL T+N D P       R   +  V+ C+   L   G  RLYS+  V K+   N DGV +  L+ + QDKV
Sbjct:   23 AMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKV 135          
BLAST of EY720148 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 2
Query:   71 YANQLAMGTMLPMAIQTVYELRIFEILYKVGPGAKLCASYIAAQLLTKNKDHP*CWIGFSRFWLATGVVECSL---DASGARRLYSVNSVSKYYVPNVDGVLVGPLIQIVQDKV 403
            +A QLA  ++LPM +++  EL + EI+ K GPGA++    IA+QL T N D P       R      ++ CS+        +RLY + +V+KY V N DGV +  L  + QDKV
Sbjct:   22 FAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKV 135          
The following BLAST results are available for this feature:
BLAST of EY720148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
COMT1_CAPAN3.217e-1439.83Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CAPCH1.596e-1338.14Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_POPTM3.557e-1339.83Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI3.557e-1339.83Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT3_POPKI7.923e-1341.23Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_COFCA1.765e-1235.00Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA3.932e-1235.00Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT2_POPTM8.760e-1240.35Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_CATRO1.494e-1138.05Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_MEDSA2.549e-1137.72Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-G01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720148 ID=EY720148; Name=EY720148; organism=Citrus sinensis; type=EST; length=895bp
CACGCCGTCCGGAAATTCAGAAACTTAAAATGGATTCTATAGTTGATGGA
GAAAGAGACAAAGCTTTGCATATGCTAATCAATTGGCGATGGGTACAATG
CTACCCATGGCCATTCAAACGGTGTATGAGCTACGCATTTTCGAGATCCT
ATACAAAGTTGGTCCTGGTGCAAAGCTCTGTGCTTCATATATTGCAGCCC
AATTGCTCACCAAGAACAAAGACCACCCATGATGCTGGATCGGATTCTCA
CGCTTCTGGCTAGCTACAGGCGTTGTTGAATGCTCACTTGATGCTTCTGG
TGCTCGGAGACTATATAGTGTGAATTCTGTCTCCAAATACTATGTGCCTA
ACGTAGATGGCGTCTTAGTAGGACCCCTAATACAAATAGTGCAGGACAAG
GTCGAGGGTGGGGGGGGGGGGTCTACCCAGGAGGGAGGAACGATTACAAT
CCGGGGGCGCTCGTCGGGGGGCGTCCAGGCGCCGGAGTGGCGCGGATGGT
GAGTTGCCCTGCGAGGCGAAGGGGGGGGGCGGGTCGTTCCTGGGCTGACA
GTCTCTGCGGTCGGGGGGAGGAACGGCGAGAGGGGAACAGAGACGGGAAG
GGGGAAGAGATGATTGGGCGTGACGGTGGGCGGGCGGTATAAGGGGAGCT
CGGAAGGGCGCCGGGCCTAGGGGTGGCGGGCGCGCAGTGGCGGGGGGGGT
GCGGGCGGCGGACATCAGAGGGTGGGGGGCGGCGAGACGGTGGACGCGGC
AGGAAGACATGTTAAGTTCCAATGGTGTTTAAACGTGTAGTAAGGAATGA
AAGATAAAAAGGTAAATGTAGATAGAGTTAGAGATGAATTATCATAACGG
CCAATAATGACAGGCTGAACGTACAACATAGGCAGGGACTTGTAC
back to top