EY720143

Overview
NameEY720143
Unique NameEY720143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720143_ssr148 microsatellite EY720143_ssr148:148..157. BLAST: Citrus ESTs to Prunus persica proteins V1
EY720143_ssr158 microsatellite EY720143_ssr158:158..171. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11156 contig Csv1_Contig11156:1..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.835e-44
Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 3
Query:  351 YNDMMKMTSTS---------SPKKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHH 692
            YND++  + +S         +PKKRR ++KRV+SVPI +VEGS+ +GE  PPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCP RKQVERS VDPS L+ITY+C+HNHP+P  S + K HH
Sbjct:   18 YNDVVPESPSSCEDSKISKPTPKKRRNVEKRVVSVPIADVEGSKSRGEVYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSKLMITYACDHNHPFPSSSANTKSHH 140          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.703e-44
Identity = 79/111 (71.17%), Postives = 98/111 (88.29%), Query Frame = 3
Query:  351 YNDMMKMTSTSSPKK-RRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSR 680
            +N M  + S+ SPK+ RR+++KRV++VP+KE+EGSR KG++ PPSDSWAWRKYGQKPIKGSPYPRGYYRCSS+KGCP RKQVERS  DP+M+LITY+ EHNHPWPL S++R
Sbjct:   30 FNGMKALISSHSPKRSRRSVEKRVVNVPMKEMEGSRHKGDTTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHPWPLTSSTR 140          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.118e-32
Identity = 65/111 (58.56%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  390 KKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHHHQHNSKSRKP 722
            K+R++  K+V+ +P      SR  GE  P SD WAWRKYGQKPIKGSPYPRGYYRCSSSKGC  RKQVERS  DP+ML+ITY+ EHNHPWP    +        +S S  P
Sbjct:  186 KRRKSQAKKVVCIPAPAAMNSRSSGEVVP-SDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSSSSSSLNP 295          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.460e-32
Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  390 KKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHHHQHNSKSRKP 722
            K+R++  K+V+ +P      SR  GE  P SD WAWRKYGQKPIKGSP+PRGYYRCSSSKGC  RKQVERS  DP+ML+ITY+ EHNHPWP+   +         S S  P
Sbjct:  188 KRRKSQAKKVVCIPAPAAMNSRSSGEVVP-SDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTRSSTSSSSNP 297          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.197e-26
Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 3
Query:  372 TSTSSPKKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP-----LPSTSRKQHHHQHNSKS 713
            ++TS  K+R+   K+V  V  + +            SD WAWRKYGQKPIKGSPYPRGYYRCS+SKGC  RKQVER+  DP M ++TY+ EHNHP P     L  ++R++   Q  SKS
Sbjct:  103 SNTSRSKRRKIQHKKVCHVAAEALN-----------SDVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPKMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSDQQTSKS 210          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.483e-24
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 3
Query:  357 DMMKMTSTSSPKKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHHHQHNSKSRKPR 725
            D ++++ + S K ++  QKRV+    ++V+   L       SD+WAWRKYGQKPIKGSPYPR YYRCSSSKGC  RKQVER+  +P    ITY+ EHNH  P   T R        +K+ +P+
Sbjct:  103 DHIRISESKSKKSKKNQQKRVV----EQVKEENLL------SDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQNPEKFTITYTNEHNHELP---TRRNSLAGSTRAKTSQPK 212          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23
Identity = 53/91 (58.24%), Postives = 63/91 (69.23%), Query Frame = 3
Query:  390 KKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            +KR+  QKR I    +E   S          D WAWRKYGQKPIKGSPYPR YYRCSSSKGC  RKQVERS++DP++ ++TY+ EH HP P
Sbjct:  145 RKRKNQQKRTICHVTQENLSS----------DLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRP 225          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.113e-23
Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 3
Query:  390 KKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPS 671
            KKR+   +R I VP    + + +      P D ++WRKYGQKPIKGSPYPRGYY+CSS +GCP RK VER   DP+ML++TY  EHNHP  LPS
Sbjct:  289 KKRKHRVRRSIRVPAISNKVADI------PPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHP-KLPS 375          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.147e-23
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 3
Query:  381 SSPKKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            S  +++   +KRV+ V  +   GSR        SD W WRKYGQKPIK SPYPR YYRC+SSKGC  RKQVERS  DP++ +ITY  EHNHP+P
Sbjct: 1157 SKSRRKNNKEKRVVCVVDR---GSR-------SSDLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNHPFP 1240          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.147e-23
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 3
Query:  390 KKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNH 653
            KKR+  Q+R+I VP    + S +      P D ++WRKYGQKPIKGSP+PRGYY+CSS +GCP RK VER++ D SML++TY  +HNH
Sbjct:  216 KKRKIKQRRIIRVPAISAKMSDV------PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNH 297          
The following BLAST results are available for this feature:
BLAST of EY720143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
WRK69_ARATH2.835e-4466.67Probable WRKY transcription factor 69 OS=Arabidops... [more]
WRK65_ARATH3.703e-4471.17Probable WRKY transcription factor 65 OS=Arabidops... [more]
WRK35_ARATH1.118e-3258.56Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRK14_ARATH1.460e-3257.66Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRK22_ARATH1.197e-2650.42WRKY transcription factor 22 OS=Arabidopsis thalia... [more]
WRK29_ARATH9.483e-2447.15Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRK27_ARATH1.239e-2358.24Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK21_ARATH2.113e-2356.38Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK16_ARATH6.147e-2356.38Probable WRKY transcription factor 16 OS=Arabidops... [more]
WRK15_ARATH6.147e-2355.68Probable WRKY transcription factor 15 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720143 ID=EY720143; Name=EY720143; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGCCCTGAAACCAATCTGTCAACATGAGTACTCCCACATTT
TTAAAGCACCCCCATTTTCCATTTCGTCTTCCGCTCATCATCAAACATTA
ATCTCCGCCACGTTCCCCTTTCTCTCTCTATCACTCTTTTTAATTATACA
CACACACATATATATATATATAATTTAGGATACATAGGACGTCGCCGGGC
GGCGATCAACGTTGAAGATAAGTATAGAGTAGAGGGGTTTCAGGTATGGA
CGGCAGGTTCAACAGCAACAGCAACCCATTTACTGGTGAGCAAGAAGAAA
ATGATACGACGCCGGAGAACAGCTCCGAATCCCCACCTTCTTCTTCCACT
TATAACGACATGATGAAGATGACCTCTACTTCTTCCCCTAAGAAAAGGCG
AGCTATGCAGAAGAGAGTAATATCAGTGCCAATCAAGGAGGTGGAGGGAT
CAAGACTGAAAGGGGAGAGCGCCCCACCCTCCGATTCCTGGGCTTGGCGA
AAATACGGCCAGAAACCCATCAAAGGCTCTCCTTATCCGAGAGGATATTA
CAGATGTAGCAGCTCGAAAGGCTGCCCGGNCAGAAAACAAGTGGAGCGAA
GCAGCGTGGACCCCAGCATGCTACTCATCACCTATTCTTGTGAACACAAC
CACCCTTGGCCTCTTCCTTCTACTTCTAGAAAACAACACCACCACCAACA
CAATTCTAAAAGCCGCAAGCCCCGACGCGACCCCGAGCCAGAGCCCGAAC
CCGAACCCGAGCCCGAGCCGGAACACGAAGAGAAGTTTACGGATCTTGCT
GATCATGGATACCCGCTCATGACGACCAGTGCGGATGTAATCCCGTGGTT
CGGGGAAATGGAACGACCACC
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