EY720121

Overview
NameEY720121
Unique NameEY720121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.456e-28
Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXX---QRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            TQCFLH H               QR+VS++KP Q+VCRAQKQ+  QEDDG++V  SRRLALTVLIGAAA+GSKVSP +A YGE+ANVFGKPK  +DFL Y G GF+L    +  P +    P
Sbjct:    4 TQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFP 125          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.627e-26
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 3
Query:   99 QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            QRHVS  KP QI+C+AQ+    EDD SAVSRRLALT+L+GAAAVGSKVSP +A YGE+ANVFGKPKT +DFLPY G GF++    +  P +    P
Sbjct:   27 QRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYP 120          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXXQRHVSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            T CFLHHH            ++      P  +VCRAQKQ   QE++G  VSRRLALTVLIGAAA+GSKVSP +A YGE+ANVFGKPK+ +D+LPY G GF+L    +  P +    P
Sbjct:    4 TSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFP 120          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25
Identity = 65/121 (53.72%), Postives = 79/121 (65.29%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXX--QRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            T CFLHHH              QR+ + +IKP QIVC+AQKQ   E +   S VSRRLALTVLIGAAAVGSKVSP +A YGE+ANVFGKPK  ++F+PY G GF+L+   +  P +    P
Sbjct:    4 TACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFP 124          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.944e-24
Identity = 63/116 (54.31%), Postives = 74/116 (63.79%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXXQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            TQCFLHH             QR V   KP  IVC+AQKQ    D  + VSRRLAL+VLIGAAAVGSKVSP +A YGE+ANVFGK KT +D+LPY G GF+L+   +  P +    P
Sbjct:    4 TQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSVLIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFP 116          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.539e-24
Identity = 64/120 (53.33%), Postives = 78/120 (65.00%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXXQRHVSNIKPTQI-VCRAQKQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            TQCFLHHH            +  V ++KP Q+ VCRAQKQ+  ++D     +VSRRLALTVLIGAAAVGSKVSP +A YGE+ANVFGKPKT +DF  Y G GF+L    +  P +    P
Sbjct:    4 TQCFLHHHALSTPARTPLV-RSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYP 122          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.331e-24
Identity = 59/116 (50.86%), Postives = 73/116 (62.93%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXXQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            TQCFLH +               V + KP Q++CRAQKQ    +  +AVSRRLALT+LIG AA+GSKVSP +A YGE+ANVFGKPK  +DFLPY G GF+L    +  P +    P
Sbjct:    5 TQCFLHQYHALRSSPARTSS---VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFP 117          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24
Identity = 63/118 (53.39%), Postives = 75/118 (63.56%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXXQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            TQCFLH +               VS+ KP Q++CRAQKQ    DD S  AVSRRLALT+LIG AA+GSKVSP +A YGE+ANVFGKPK  +DFLPY G GF+L    +  P +    P
Sbjct:    5 TQCFLHQYHALRSSPARTSS---VSSPKPNQLICRAQKQ----DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYP 115          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP_FRIAG (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.149e-23
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 3
Query:   45 CFL-HHHXXXXXXXXXXXXQRHVSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            CFL HH              R V  IKP+Q++CRAQK +   E+  +AVSRRLALT+LIG+AAVG+K++P  A YGE+ANVFGK KT +DFLPY G GF L+   +  P +    P
Sbjct:    6 CFLLHHAPSTPATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFP 121          
BLAST of EY720121 vs. ExPASy Swiss-Prot
Match: PSBP3_TOBAC (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.627e-21
Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 3
Query:   39 TQCFLHHHXXXXXXXXXXXXQRHVSNIKPTQI-VCRAQ-KQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPGEAGYGESANVFGKPKTRSDFLPYKGYGFRLVDSLEMEPREISRVP 386
            TQCFLHHH            +  V ++K  Q+ VCRAQ KQ+  + D     +VSRRLALT+LIGAAAVGSKVSP +A YGE+ANVFGKPKT +DF  Y G GF+L    +  P +    P
Sbjct:    4 TQCFLHHHALSTPARTSLV-RGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYP 123          
The following BLAST results are available for this feature:
BLAST of EY720121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PSBP1_TOBAC6.456e-2856.56Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP1_ARATH4.627e-2662.50Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_CUCSA7.892e-2652.14Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SPIOL3.917e-2553.72Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_PEA1.944e-2454.31Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_TOBAC2.539e-2453.33Oxygen-evolving enhancer protein 2-2, chloroplasti... [more]
PSBP_SOLTU4.331e-2450.86Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SOLLC7.387e-2453.39Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_FRIAG2.149e-2350.00Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP3_TOBAC2.627e-2151.24Oxygen-evolving enhancer protein 2-3, chloroplasti... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-D01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720121 ID=EY720121; Name=EY720121; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGGAGAGAGCGAAAAGAAAAAATGGCATCACTCAATGCTTC
TTGCACCACCATGCACGCTCTACTACACCAGCAAGAACATCATCATCTCA
GCGCCACGTGTCGAACATCAAGCCCACCCAGATTGTCTGCCGTGCGCAGA
AGCAAGCTGTCCAAGAAGATGACGGCAGCGCCGTCTCCCGCCGTTTGGCT
CTGACGGTGCTCATTGGTGCTGCTGCCGTCGGCTCCAAGGTCTCTCCTGG
CGAGGCTGGCTACGGTGAATCAGCCAATGTGTTTGGTAAGCCAAAGACCA
GGAGTGACTTCTTGCCATACAAGGGATATGGATTCAGGCTGGTCGATTCC
CTCGAAATGGAGCCCCGAGAAATATCGAGAGTGCCGTGGTCAGGTTCGTA
GATACCAACGACAAGTCGAGGGCCCACGGCAAGGTGCTCGGTATAATCGC
CGAGAGGGGAGGAAGTCGATCGTGAAGGAGGAGCCCCCGAGGAGTAGCCC
GGGAGGGTGGAGTAGGGGGGGGAGAGGAGGCGAGCGCGGCAAGGGCGGTG
GGAGGGGGGGGGGACGGGGGGGGGGGGGGGCGTAGAGGTGGGGGGGGGGT
GGGGACGACCAGGAAATAATGGGGTAGGGGATAACAGGAGGGGGGGGGGG
GATGAAGGGGGGAGGAGGGGGGAGGGGGGGGGGGGGGGAGGGGGGGAGGT
GGGGCTGGGAGGGGGGAAGCGCAGAACACCAGGGGGGGGCGGGGGGGGGG
GGGGGGGCCAAGAAACGGAGAAAAGAAGAGATGAAAGTGAGAAAAATAAA
GGTAAAAGTGAAACAGAAATGGGGAAGAGAAGAGGCTAGGGAGGGGAGGG
GGGGGGAGAGGGGGGAGGAAGGGGGGGG
back to top