EY720116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY720116 vs. ExPASy Swiss-Prot
Match: CDC73_RAT (Parafibromin OS=Rattus norvegicus GN=Cdc73 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 26 SASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQ---------VVKAYEVRDKPSTMKSEYWDRVVAVFVLGKEWQFKEWPF----KDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLXEF-VRSRSH 493 +A+ +LIT+ N K+ L+D ++P+D K K G + E T+ R +DQ V Y V D+P + + WDRVVAVFV G WQFK WP+ V+IF KI F++++ D V V++W+V ++ +S +KRH DR L W+ L + V+ +SH Sbjct: 366 AATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETL---IQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY--DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSH 528
BLAST of EY720116 vs. ExPASy Swiss-Prot
Match: CDC73_MOUSE (Parafibromin OS=Mus musculus GN=Cdc73 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 26 SASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQ---------VVKAYEVRDKPSTMKSEYWDRVVAVFVLGKEWQFKEWPF----KDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLXEF-VRSRSH 493 +A+ +LIT+ N K+ L+D ++P+D K K G + E T+ R +DQ V Y V D+P + + WDRVVAVFV G WQFK WP+ V+IF KI F++++ D V V++W+V ++ +S +KRH DR L W+ L + V+ +SH Sbjct: 366 AATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETL---IQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY--DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSH 528
BLAST of EY720116 vs. ExPASy Swiss-Prot
Match: CDC73_HUMAN (Parafibromin OS=Homo sapiens GN=CDC73 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 26 SASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQ---------VVKAYEVRDKPSTMKSEYWDRVVAVFVLGKEWQFKEWPF----KDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLXEF-VRSRSH 493 +A+ +LIT+ N K+ L+D ++P+D K K G + E T+ R +DQ V Y V D+P + + WDRVVAVFV G WQFK WP+ V+IF KI F++++ D V V++W+V ++ +S +KRH DR L W+ L + V+ +SH Sbjct: 366 AATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETL---IQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY--DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSH 528
BLAST of EY720116 vs. ExPASy Swiss-Prot
Match: CDC73_CHICK (Parafibromin OS=Gallus gallus GN=CDC73 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 26 SASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQ---------VVKAYEVRDKPSTMKSEYWDRVVAVFVLGKEWQFKEWPF----KDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLXEF-VRSRSH 493 +A+ +LIT+ N K+ L+D ++P+D K K G + E T+ R +DQ V Y V D+P + + WDRVVAVFV G WQFK WP+ V+IF KI F++++ D V V++W+V ++ +S +KRH DR L W+ L + V+ +SH Sbjct: 366 AATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETL---IQRRKDQMQPGGTTVSVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY--DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSH 528
BLAST of EY720116 vs. ExPASy Swiss-Prot
Match: CDC73_SCHPO (Cell division control protein 73 OS=Schizosaccharomyces pombe GN=cdc73 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.936e-19 Identity = 45/154 (29.22%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 29 ASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMR-PECVTVQKKFSRDRDQVVKAYEVRDKPSTMKSEYWDRVVAVFVLGKEWQFKEWPFKDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLXEFVRSR 487 ++ +L+T++N+K+FLE+G+++P G R PE + + K S + ++ + + + K +YWDRVV VF G+ WQF+++ + + ++F+ + GF +++ D A WNV+ I + + +RH DR ++WD+L ++ +R Sbjct: 213 SASSLLTMHNIKKFLEEGIFVPPAEAAHAAGGGRGPELIALSHKSSNSKFGTMR-FIIVEGTEKFKPDYWDRVVCVFTTGQAWQFRDYKWSEPHQLFHHVKGFLVQYVGDPPHPA--THDWNVEGIFVERLRRHTDREVVSQLWDKLERWMENR 363
BLAST of EY720116 vs. ExPASy Swiss-Prot
Match: CDC73_YEAST (Cell division control protein 73 OS=Saccharomyces cerevisiae GN=CDC73 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18 Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 26 SASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQVVKAYEVRDKPSTMKSEYWDRVVAVFVLGKEWQFKEWPFKDHVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLXEFVRSRSH 493 SA+ +++T+ N+K+FL + Y V +N+ + V ++K F R + ++ V + K EYWDRVVA+F G WQF + + E+F + G+Y F DSV + V+QWNV+ + + KNKR +D W L + + SR + Sbjct: 244 SAASSILTVANIKQFLLESKY----VNPRNLPSVPNGLVNIEKNFERI-SRPIRFIIVDNTRMFTKPEYWDRVVAIFTTGHTWQFNNYQWNSPQELFQRCKGYYFHFAGDSV--PQHVQQWNVEKVELDKNKRFKDVEVVRYFWHSLEKELISRGY 392 The following BLAST results are available for this feature:
BLAST of EY720116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720116 ID=EY720116; Name=EY720116; organism=Citrus sinensis; type=EST; length=892bpback to top |