EY720096

Overview
NameEY720096
Unique NameEY720096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720096_ssr472 microsatellite EY720096_ssr472:472..483. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.117e-42
Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKA+CSGFEETTEPA+CLS DV++NECLDNNGGCWQDK+A++T CKDTFRGRVCECP  DGVQFK DGYSHCE SG   RC I+NGG W+E RDG  +S
Sbjct:  393 VLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTFRGRVCECPTVDGVQFKGDGYSHCEPSGP-GRCTINNGGCWHEERDGHAFS 491          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.036e-41
Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKAICSGFEETT+PAVCLS DV+TNECL NNGGCWQDKTA++  CKDTFRGRVCECPL DGVQFK DGY+ CEVSG   RCKI+NGG W+++R+G  +S
Sbjct:  388 VLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKTANIAACKDTFRGRVCECPLVDGVQFKGDGYTTCEVSGH-GRCKINNGGCWHDARNGHAFS 486          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.570e-40
Identity = 72/100 (72.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKA+CSGFEE+TEPA+CLS D++TNECLDNNGGCWQDK+A++T CKDTFRG+VC CP+ DGV+FK DGYSHCE SG   RC I+NGG W+E RDG  +S
Sbjct:  393 VLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTFRGKVCVCPIVDGVRFKGDGYSHCEPSGP-GRCTINNGGCWHEERDGHAFS 491          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 63/100 (63.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKA+CSGF ETTEP +CL+ D++TNECL NNGGCW+DKT ++T C+DTFRGRVC+CP+  GV+F  DGY+HCE SG   RC I+NGG W +++ G+ YS
Sbjct:  392 VLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTFRGRVCQCPIVQGVKFLGDGYTHCEASGAL-RCGINNGGCWKQTQMGKTYS 490          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 65/100 (65.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKA+CSGF+E+TEPA+CL+ D++TNECL+NNGGCWQDK A++T C+DTFRGR+CECP   GV+F  DGY+HC+ SG    C I+NGG W ESR G  YS
Sbjct:  388 VLKAMCSGFQESTEPAICLTEDLETNECLENNGGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGAL-HCGINNGGCWRESRGGFTYS 486          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.906e-35
Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKAICSGF+E TEP +CLSGD++TNECL+ NGGCW+DK ++VT CKDTFRGRVCECP+ +GVQ+K DGY+ CE  G   RC I+ GG W+E++ G  +S
Sbjct:  390 VLKAICSGFKERTEPGICLSGDIETNECLEANGGCWEDKKSNVTACKDTFRGRVCECPVVNGVQYKGDGYTSCEPYGPA-RCSINQGGCWSETKKGLTFS 488          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.614e-34
Identity = 63/100 (63.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKAICSGF+E TEP++CL+ D++TNECL  NGGCWQDK ++VT CKDTFRGRVCECP+ DGVQ+K DGY+ C+  G   RC ++NG  W+E+R G  +S
Sbjct:  389 VLKAICSGFKERTEPSICLNSDIETNECLIENGGCWQDKRSNVTACKDTFRGRVCECPVVDGVQYKGDGYTSCKPYGPA-RCSMNNGDCWSETRKGLTFS 487          
BLAST of EY720096 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 59/100 (59.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:   31 VLKAICSGFEETTEPAVCLSGDVDTNECLDNNGGCWQDKTAHVTTCKDTFRGRVCECPLSDGVQFKRDGYSHCEVSGTCRRCKISNGGGWNESRDGQNYS 330
            VLKAIC+GF ET+EPA+CL+  ++TNECL+NNGGCWQD  A++T C+DTFRGR+CECP+  GVQ+K DGY+ C   G   RC ++NGG W+++R+G  +S
Sbjct:  391 VLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTFRGRLCECPVVKGVQYKGDGYTSCTPYGPA-RCTMNNGGCWSDTRNGLTFS 489          
The following BLAST results are available for this feature:
BLAST of EY720096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR3_ARATH6.117e-4276.00Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR1_PEA3.036e-4176.00Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR4_ARATH2.570e-4072.00Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR2_ARATH2.252e-3663.00Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR1_ARATH2.252e-3665.00Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR6_ARATH1.906e-3564.00Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR5_ARATH1.614e-3463.00Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR7_ARATH6.779e-3359.00Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-A01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720096 ID=EY720096; Name=EY720096; organism=Citrus sinensis; type=EST; length=886bp
CCACCCACGCGTCCGGTTGGAGAAAGGTGTGTCTTGAAGGCCATATGTTC
TGGTTTTGAGGAAACAACTGAGCCTGCTGTTTGTTTGAGTGGTGATGTAG
ACACAAATGAGTGCTTGGATAATAACGGGGGTTGCTGGCAAGATAAAACA
GCCCACGTCACAACCTGCAAGGATACATTCCGTGGGAGGGTATGTGAATG
CCCCCTATCTGATGGCGTGCAGTTCAAACGAGATGGCTATAGCCATTGTG
AAGTGAGTGGGACCTGCAGGAGATGCAAGATCAGTAATGGAGGTGGGTGG
AATGAATCCAGGGATGGGCAAAACTACTCCGGCTGGTAAGGATCTGATAA
ATGGGAAAATGAACAATGCGGCTCAGGAGAGGAGATAAAAGGGGGAGGGG
TGAAAAAGGAAGGGGGGGTGTTTATAATAGTGGCGGAAGAGGGAGAGGGG
GGGGTTTTGAAACTAGGGTATGGAGGGAGGGAGGGGGCAAGGGGGAGGGG
GATGGGGGGAGAGGAAAGTACGTGGGGGACTCGGACTCGAGGGGAGGGGG
GGCCAGGGCACCAAGTAGGGGCCAAACCCCTAGAAACAGGAAGGGACCAG
AAAAAGAGCGCGAACGAACCCCCAGGCGGGGCCGCCTCACCCACCCGGGG
GGCGGCCCAGACAAACAATGCCGTGGCTGGGGCGAAAAAAGGGTGGGGGG
GGGGGGGCGGCGGAGCGAGGGGGGGGGAGGGGGAAGGAGGAAAGAACAAG
CAGGCGGGGGGGTGGAGGGANTCACAGGCGGGCGCGAGGAGAGGGGGCCC
CACGCGGCGGCGGGGGGAGGAGCCGTGCGGGCGCGGGCTCGGAGCACCCG
CTTGAGGGGGGTCACCACGGGGGGAGGCGGCACCGG
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