EY720091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.929e-51 Identity = 105/155 (67.74%), Postives = 118/155 (76.13%), Query Frame = 1 Query: 421 FGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAG-CYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 FG TSLYVGDL+ NVTDSQL+D F QMG VV+VRVCRDL TRRSLGYGYVNF+N Q+AARA++ LN+ PL GKPIRVMYSHRDPS+R+SGAGNIFI NLD+ IDHKALHDT S+FG +S S KG QKAIEKLNGM Sbjct: 33 FGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGM 187 HSP 2 Score: 71.633 bits (174), Expect = 6.707e-12 Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----MYSHRDPSLR------------KSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYR-PSWSVKGLWXCXILT*GVCQKAIEKLNG 879 T++YV +L + TD L + F + G++ S V +D +S G+G+VNF NA +AARA+E LN + K V S R+ LR K + N+++ NLD I + L + S FGT S+ R P+ + KG T +A+ +L+G Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSG 380
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.877e-41 Identity = 85/150 (56.67%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL ++VT++ LY+ F+ G V+S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKPIR+M+S RDPSLRKSG GN+FI NLDK ID+KAL+DT SAFG LS KG T KAIEK+NGM Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGM 161
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.532e-40 Identity = 83/150 (55.33%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AIEK+NGM Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGM 161 HSP 2 Score: 70.4774 bits (171), Expect = 1.494e-11 Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 T++Y+ + ++ D +L +LF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++ NLD GID + L S FGT SA KG + KA+ ++NG Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.532e-40 Identity = 83/150 (55.33%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AIEK+NGM Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGM 161 HSP 2 Score: 70.4774 bits (171), Expect = 1.494e-11 Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 T++Y+ + ++ D +L +LF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++ NLD GID + L S FGT SA KG + KA+ ++NG Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.532e-40 Identity = 83/150 (55.33%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AIEK+NGM Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGM 161 HSP 2 Score: 72.0182 bits (175), Expect = 5.136e-12 Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 T++Y+ + ++ D +L DLF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++ NLD GID + L S FGT SA KG + KA+ ++NG Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.532e-40 Identity = 83/150 (55.33%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AIEK+NGM Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGM 161 HSP 2 Score: 72.0182 bits (175), Expect = 5.136e-12 Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 T++Y+ + ++ D +L DLF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++ NLD GID + L S FGT SA KG + KA+ ++NG Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.413e-40 Identity = 82/150 (54.67%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AI+K+NGM Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGM 161
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.457e-40 Identity = 82/150 (54.67%), Postives = 103/150 (68.67%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL + T++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AIEK+NGM Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGM 161 HSP 2 Score: 72.0182 bits (175), Expect = 5.136e-12 Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 T++Y+ + ++ D +L DLF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++ NLD GID + L S FGT SA KG + KA+ ++NG Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 7.603e-40 Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + G+P+R+M+S RDPSLRKSG GNIFI NLDK ID+KAL+DT SAFG LS KG T ++AI+K+NGM Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGM 161
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PAP1A_DICDI (Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.297e-39 Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882 ++SLYVGDL V++ L+++FNQ+G V ++RVCRD +TRRSL Y YVN+ N +A RAL+ LN TP+ GK R+M+S RDPSLRKSG GN+FI NLDKGIDHKAL+DT SAFG LS S KG T KAI K+NGM Sbjct: 9 SSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGM 161 The following BLAST results are available for this feature:
BLAST of EY720091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720091 ID=EY720091; Name=EY720091; organism=Citrus sinensis; type=EST; length=894bpback to top |