EY720021

Overview
NameEY720021
Unique NameEY720021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11223 contig Csv1_Contig11223:17..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_CITUN (V-type proton ATPase catalytic subunit A OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.126e-40
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR
Sbjct:  543 MMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_DAUCA (V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.865e-36
Identity = 72/81 (88.89%), Postives = 77/81 (95.06%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHFYNLANQAVE+GAGMDGQKI+YTLIKHRLGDLFYRLVSQKFEDPAEGE  LV KFKKLH+DLT+GFR LEDETR
Sbjct:  543 MMRNIIHFYNLANQAVERGAGMDGQKISYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRNLEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_BRANA (V-type proton ATPase catalytic subunit A OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35
Identity = 71/81 (87.65%), Postives = 77/81 (95.06%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHFYNLANQAVE+GAGMDGQKI+Y+LIKHRLGDLFYRLVSQKFEDPAEGE  LV KFKKLH+DLT+GFR LEDETR
Sbjct:  543 MMRNIIHFYNLANQAVERGAGMDGQKISYSLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRNLEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_ARATH (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana GN=VHA-A PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.229e-35
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHFYNLANQAVE+ AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGE  LV KFKKL++DL AGFRALEDETR
Sbjct:  543 MMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFKKLYDDLNAGFRALEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_GOSHI (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum GN=CVA69.24 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.965e-35
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNI+HF  LANQAVEK AGMDGQKITY+LIKHRLGDLFYRLVSQKFEDPAEGE ALVAKFKKL+EDLTAGFRALEDETR
Sbjct:  543 MMRNIVHFNALANQAVEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDLTAGFRALEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_PHAAU (V-type proton ATPase catalytic subunit A OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 3.218e-34
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHFYNLANQAVE+GAG DGQKITY+LIKHR+GDLFYRLVSQKFEDPAEGE ALV +F+KLHEDL+ GFR LEDETR
Sbjct:  543 MMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRVGDLFYRLVSQKFEDPAEGEAALVGQFQKLHEDLSTGFRNLEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_BETVU (V-type proton ATPase catalytic subunit A OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.203e-34
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHFYNLANQAVE+GAG DGQKITY+LIK RLGDLFYRLVSQKFEDPAEGE ALVAKFKKL+EDLTA FR LEDETR
Sbjct:  543 MMRNIIHFYNLANQAVERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDALVAKFKKLNEDLTAAFRNLEDETR 623          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_MAIZE (V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.681e-31
Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHF  LANQAVE+ AG DG KITY++IKHRLGDLFYRLVSQKFEDPAEGE ALV KFKKL++DLT GFR LEDE R
Sbjct:  481 MMRNIIHFNTLANQAVERAAGTDGHKITYSVIKHRLGDLFYRLVSQKFEDPAEGEEALVGKFKKLYDDLTTGFRNLEDEAR 561          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_HORVU (V-type proton ATPase catalytic subunit A (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.069e-29
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNIIHF  LANQAVE+ A  DG KITY ++K R+GDLFYRLVSQKFEDPAEGE  LVAKF+KL++DLTAGFR LEDE R
Sbjct:  500 MMRNIIHFNQLANQAVERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQKLYDDLTAGFRNLEDEAR 580          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA1_ACEAT (V-type proton ATPase catalytic subunit A isoform 1 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.223e-18
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAG--MDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 253
            +MRNI+ F+ LA QA+E+ A   +DGQKIT+ +IK +LGDL Y++ SQKFEDP++GE  + A   +L+E+L   FRALEDE R
Sbjct:  531 MMRNIVTFHRLATQAIERTAAGNVDGQKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVVTAHLNELNEELKEKFRALEDEYR 613          
The following BLAST results are available for this feature:
BLAST of EY720021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
VATA_CITUN5.126e-4098.77V-type proton ATPase catalytic subunit A OS=Citrus... [more]
VATA_DAUCA5.865e-3688.89V-type proton ATPase catalytic subunit A OS=Daucus... [more]
VATA_BRANA1.706e-3587.65V-type proton ATPase catalytic subunit A OS=Brassi... [more]
VATA_ARATH2.229e-3588.89V-type proton ATPase catalytic subunit A OS=Arabid... [more]
VATA_GOSHI4.965e-3590.12V-type proton ATPase catalytic subunit A OS=Gossyp... [more]
VATA_PHAAU3.218e-3485.19V-type proton ATPase catalytic subunit A OS=Phaseo... [more]
VATA_BETVU4.203e-3488.89V-type proton ATPase catalytic subunit A OS=Beta v... [more]
VATA_MAIZE5.681e-3180.25V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA_HORVU9.069e-2975.31V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA1_ACEAT4.223e-1854.22V-type proton ATPase catalytic subunit A isoform 1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-A03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720021 ID=EY720021; Name=EY720021; organism=Citrus sinensis; type=EST; length=610bp
CCACGCGTCCGTGATGCGTAACATTATCCATTTCTATAACTTGGCCAATC
AGGCCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACC
CTTATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAA
GTTTGAGGACCCAGCAGAAGGAGAACCAGCTCTGGTTGCTAAATTCAAAA
AGCTGCATGAGGATCTGACCGCTGGTTTCCGCGCCCTCGAGGATGAAACT
CGATGATTGAAAGTGTCAAGTTAGATTCTTTGTAGTCCCAGCGGCACCTC
TGATCTTACGGTAACAACAGTTGGCTTCTCGATGTTCCATTGAATGGAGA
ACCAAAATGTTGGTGGGTCCATGTTATGCCACTTTGCAGTGCTTGTTTGG
CCTTCTAGTTGCAGTGTGGTAAATTTGATTCTATTATGTATTTTTTTGTT
CTTCCTGTCGTTCCCTCAATTCCTTTTTTTGACTAGTGATCAAAAGTTCG
AAGTCCAATCCTTATTTATGTATTTATGCAATAAGTGTGTGTATTGAGTG
ACGCACATGTGTATTGATTTTGTTAAATGGCTTANGAAAAACTGATGTCC
CGTTTTGTTC
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