EY750412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 4.234e-58 Identity = 109/174 (62.64%), Postives = 138/174 (79.31%), Query Frame = 3 Query: 156 MASLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRASSSSSRMIIQCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEMGSGSNCH 677 MA++TSV+F++I Q S +RK +VSS+RS+ + FRFR++ V R+S+S+SR ++ C S++ PTVA+TK+ FL YKRPIP++YNTVLQELIVQQHL RYK++YQYDPVFALGFVTVYD+LMEGYPS+EDR AIF+AYI ALKEDPEQYR DAQKLEE N + Sbjct: 1 MAAVTSVSFSAITQ-SAERKSSVSSSRSI----DTFRFRSNFSFDSVNVRSSNSTSRFVVHCTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNAN 169 HSP 2 Score: 33.4982 bits (75), Expect = 4.234e-58 Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 652 KWARGQTAISLVEFPSKKREIEGKLNNIAKR 744 +WAR Q A +LV+F SK+ EIE +IA+R Sbjct: 161 EWARTQNANTLVDFSSKEGEIENIFKDIAQR 191
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.112e-55 Identity = 92/117 (78.63%), Postives = 104/117 (88.89%), Query Frame = 3 Query: 321 SRMIIQCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEMGSGSN 671 SR +++C++TA DVPPTVAETKMNFLK YKRPI SIY+TVLQEL+VQQHLMRYK TYQYD VFALGFVTVYD+LMEGYPS+EDR+AIF+AYITAL EDPEQYR DAQK+EE N Sbjct: 44 SRSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQN 160 HSP 2 Score: 44.2838 bits (103), Expect = 7.112e-55 Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 1 Query: 652 KWARGQTAISLVEFPSKKREIEGKLNNIAKRTRGQGEFHLPPFPLLVGRFPLFK 813 +WAR Q SLVEF SK EIE L +I++R +G+G F F VG F L + Sbjct: 154 EWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSYSRF-FAVGLFRLLE 206
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.910e-53 Identity = 103/169 (60.95%), Postives = 125/169 (73.96%), Query Frame = 3 Query: 162 SLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRA----SSSSSRMIIQCMSTAT-DVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEE 653 +++S++F ++GQ+ +SNF R S C +F S S+S+ +I CMS T DVPP V+ETK FLK YKRPIPSIYNTVLQELIVQQHLMRYK+TY+YDPVFALGFVTVYD+LMEGYPSD+DR+AIF+AYI AL EDP+QYRIDAQK+EE Sbjct: 5 AISSLSFPALGQSD------------KISNFASSRPLASAIRICTKFSRLSLNSRSTSKSLIHCMSNVTADVPP-VSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEE 160 HSP 2 Score: 38.891 bits (89), Expect = 2.910e-53 Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 1 Query: 652 KWARGQTAISLVEFPSKKREIEGKLNNIAKRTRGQGEFHLPPFPLLVGRFPLFK 813 +WAR QT+ SLV+F SK+ +IE L +IA R + F F VG F L + Sbjct: 160 EWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRF-FAVGLFRLLE 212
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_NOSP7 (Protein thf1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=thf1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.243e-20 Identity = 43/99 (43.43%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 369 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEMGSG 665 TV++TK F L+ RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +DR M+GY + D+E+IF A A+++DP+ YR DA++L+ + G Sbjct: 6 TVSDTKRTFYNLHTRPINTIYRRVVEELMVEMHLLSVNIDFSYNPIYALGVVTTFDRFMQGYEPERDQESIFNALCRAIEQDPQHYRQDAERLQAIAKG 104
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_TRIEI (Protein thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.623e-20 Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 369 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEM 656 TV++TK F + RPI SIYN V++EL+V+ HL+ Y Y+P +ALG VT +DR M+GY ED+ +IF A I +EDP +YR DA+ LE++ Sbjct: 6 TVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQGYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDL 101
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_ANASP (Protein thf1 OS=Anabaena sp. (strain PCC 7120) GN=thf1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.057e-20 Identity = 42/94 (44.68%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 369 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLE 650 TV++TK F L+ RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +DR MEGY + D+E+IF A A++++P++YR DA++L+ Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMEGYQPERDKESIFSAICQAVEQEPQRYRQDAERLQ 99
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_ACAM1 (Protein thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.374e-19 Identity = 42/101 (41.58%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 369 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEMGSGSN 671 TV++TK F ++ RP+ S+Y V++EL+V+ HL+R ++YDP+FALG T +DR M+GY + D++AIF A A + DP Q + D Q+L E+ + Sbjct: 6 TVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKS 106
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_ANAVT (Protein thf1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=thf1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.344e-19 Identity = 41/94 (43.62%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 369 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLE 650 TV++TK F L+ RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +DR M+GY + D+E+IF A A++++P++YR DA++L+ Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQGYQPERDKESIFSAICQAVEQEPQRYRQDAERLK 99
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_CYAP7 (Protein thf1 OS=Cyanothece sp. (strain PCC 7424) GN=thf1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.222e-19 Identity = 43/95 (45.26%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 369 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEE 653 TV+++K +F + RPI S+Y V++EL+V+ HL+ +QYDPV+ALG VT + R M+GY D D+E+IF A ++ DP+QYR DA+++ E Sbjct: 6 TVSDSKRDFYTKHTRPINSVYRRVVEELMVEMHLLSVNSDFQYDPVYALGVVTSFQRFMQGYRPDADKESIFNALCQSVGGDPQQYRQDAERMIE 100
BLAST of EY750412 vs. ExPASy Swiss-Prot
Match: THF1_CYAP4 (Protein thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=thf1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.519e-18 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 3 Query: 363 PPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKL 647 P TV++TK F + RPI SIY V++EL+V+ HL+R +T+ YDPVFALG VT ++R M+GY D+ +IF A A + DP+Q + DAQ+L Sbjct: 4 PRTVSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQGYHPPADQTSIFNAICLAQELDPQQVQQDAQEL 98 The following BLAST results are available for this feature:
BLAST of EY750412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY750412 ID=EY750412; Name=EY750412; organism=Citrus sinensis; type=EST; length=1019bpback to top |