FC923031

Overview
NameFC923031
Unique NameFC923031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_DESMR (Flavoprotein wrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.319e-44
Identity = 98/201 (48.76%), Postives = 124/201 (61.69%), Query Frame = 2
Query:    5 VYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 592
            V IVYYS+YGHV  +AQ + +G   V G+ A L +VPETL EEV+GKM A       S VP  T  EL +AD  VFG PTRFG M  Q + FLDATG +W    L GKP G+F              ++ I  L+HHGMI V + Y+F AG   +++V GGSPYGA T A GDGSR P+E EL+ A  QG+HIA + ++L+
Sbjct:    3 VLIVYYSLYGHVAAMAQAVAEGVHQVPGMTATLRRVPETLSEEVIGKMGATEAQKALSHVPACTLEELEDADAIVFGTPTRFGNMCGQMRQFLDATGQIWMRGGLVGKPGGVFCSTATQHGGQETTLMSFIQTLLHHGMIVVGLPYSF-AGQMRLDEVTGGSPYGATTIAGGDGSRMPSENELDAARFQGRHIADVTRRLR 202          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSF (Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.656e-44
Identity = 99/201 (49.25%), Postives = 121/201 (60.20%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 589
            KV +VYYSMYGH+ ++A+ I +GA  V G E  L +VPETL  +VL KM A       S +PI T +ELAEAD  +FG PTRFG M  Q + FLDATGGLW    L GK   +F              L+  T L+HHGM+ V + Y F  G    +++ GGSPYGA T AG  G RQPTE EL  A +QGKH+A IA KL
Sbjct:    2 KVLVVYYSMYGHIHRMAEAIVEGAKEVVGAEVVLRRVPETLSHDVLEKMGAVEAQRSMSHIPICTVDELAEADAVIFGSPTRFGNMCGQMRQFLDATGGLWVKGSLIGKVGSVFASSNTQHGGQESTILSFHTTLLHHGMVIVGLPYAF-QGQMRNDEITGGSPYGASTVAGTQGERQPTENELAAARYQGKHVASIAYKL 201          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_SALTI (Flavoprotein wrbA OS=Salmonella typhi GN=wrbA PE=3 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.647e-43
Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G+F               T  T L HHGM+ VPIGY+    +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLGGVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYS-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_SERP5 (Flavoprotein wrbA OS=Serratia proteamaculans (strain 568) GN=wrbA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.151e-43
Identity = 92/198 (46.46%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 592
            K+ ++YYSMYGH+  LA+ + +GA  V GVE  L +VPET+P E   K         P+ +P ELA+ DG +FG PTRFG MA Q + FLD TGGLW +  L GK  G  +              +  T L HHG I VPIGY     +F++  V+GG+PYGA T A GDGSRQP++ EL  A +QG+H+A I  KLK
Sbjct:    3 KILVLYYSMYGHIETLAEAVAEGARRVSGVEVTLKRVPETIPAEAFAKAGGKQDQKAPVASPQELADYDGIIFGTPTRFGNMAGQMRTFLDQTGGLWASGALYGK-VGSVFSSTGTGGGQEHTITSTWTTLAHHGFIIVPIGYA-TPELFDVSHVRGGTPYGATTIAGGDGSRQPSQEELTIARYQGEHVAKITAKLK 198          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_YERPY (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_YERPS (Flavoprotein wrbA OS=Yersinia pseudotuberculosis GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_YERPP (Flavoprotein wrbA OS=Yersinia pestis (strain Pestoides F) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_YERPN (Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_YERPG (Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC923031 vs. ExPASy Swiss-Prot
Match: WRBA_YERPE (Flavoprotein wrbA OS=Yersinia pestis GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 2
Query:    2 KVYIVYYSMYGHV*KLAQEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 595
            K+ ++YYSMYGH+  LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
The following BLAST results are available for this feature:
BLAST of FC923031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_DESMR3.319e-4448.76Flavoprotein wrbA OS=Desulfovibrio magneticus (str... [more]
WRBA_GEOSF9.656e-4449.25Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32)... [more]
WRBA_SALTI1.647e-4345.23Flavoprotein wrbA OS=Salmonella typhi GN=wrbA PE=3... [more]
WRBA_SERP52.151e-4346.46Flavoprotein wrbA OS=Serratia proteamaculans (stra... [more]
WRBA_YERPY2.809e-4346.73Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
WRBA_YERPS2.809e-4346.73Flavoprotein wrbA OS=Yersinia pseudotuberculosis G... [more]
WRBA_YERPP2.809e-4346.73Flavoprotein wrbA OS=Yersinia pestis (strain Pesto... [more]
WRBA_YERPN2.809e-4346.73Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (... [more]
WRBA_YERPG2.809e-4346.73Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (... [more]
WRBA_YERPE2.809e-4346.73Flavoprotein wrbA OS=Yersinia pestis GN=wrbA PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BD07RM1 SLH Citrus sinensis cDNA clone KN0AAM3BD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923031 ID=FC923031; Name=FC923031; organism=Citrus sinensis; type=EST; length=601bp
CAAAGTGTATATTGTGTACTATTCCATGTATGGACATGTATAGAAACTGG
CACAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCAAA
TTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTACTTGGTAAGATGAG
TGCACCACCAAAGAGTGATGTACCTATTATTACCCCCAACGAACTTGCTG
AGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATTTGGAATGATGGCT
GCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTCTATGGAGGACACA
ACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGCACTGGGTCACAAG
GTGGTGGACAAGAGACTACAGCGTTGACGGCAATTACTCAGCTTGTTCAC
CATGGGATGATATTTGTTCCTATTGGATACACATTTGGTGCTGGCATGTT
TGAGATGGAGAAAGTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTTTG
CTGGAGATGGCTCGAGACAGCCAACTGAACTTGAGTTGGAGCAAGCTTTC
CACCAGGGAAAACACATTGCGGGCATTGCAAAGAAGCTGAAGGGAAATGC
T
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