EY749743 | Citrus Genome Database

Overview


Name	EY749743
Unique Name	EY749743
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1028

Libraries


Library Name	Type
Sweet orange flower, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF3_HEVBR (Profilin-3 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.203e-49
Identity = 95/124 (76.61%), Postives = 103/124 (83.06%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVD+HLMCDIDGHHLT+AAI+GHDGSVWAQSS+FPQFKPEE+AAIMKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIY+EP+      NMIVERLG
Sbjct:    1 MSWQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPL-TPGQCNMIVERLG 123

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF_PYRCO (Profilin OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.984e-48
Identity = 94/124 (75.81%), Postives = 100/124 (80.65%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQ YVDDHLMCDIDGHHLT+AAI+GHDGSVWAQSS FP+FKPEEI AIMKDF+EPGSLAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIYEEP+      NMIVERLG
Sbjct:    1 MSWQAYVDDHLMCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPL-TPGQCNMIVERLG 123

HSP 2 Score: 23.0978 bits (48), Expect = 1.984e-48
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  455 GDYLIDQGL 481
            GDYLIDQGL
Sbjct:  123 GDYLIDQGL 131

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF6_HEVBR (Profilin-6 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.727e-48
Identity = 92/124 (74.19%), Postives = 101/124 (81.45%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMCDIDGH LT+AAI+GHDGSVWAQSS+FPQFK +E+AA+MKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIY+EP+      NMIVERLG
Sbjct:    1 MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPL-TPGQCNMIVERLG 123

HSP 2 Score: 22.3274 bits (46), Expect = 9.727e-48
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  455 GDYLIDQGL 481
            GDYL+DQGL
Sbjct:  123 GDYLLDQGL 131

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF_LITCN (Profilin OS=Litchi chinensis PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.268e-47
Identity = 92/124 (74.19%), Postives = 100/124 (80.65%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMC+ DG HLT+AAI+GHDGSVWAQS+NFPQFKP EIAAIMKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIY+EP+      NM+VERLG
Sbjct:    1 MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPM-TPGQCNMVVERLG 123

HSP 2 Score: 22.7126 bits (47), Expect = 1.268e-47
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  455 GDYLIDQGL 481
            GDYL+DQGL
Sbjct:  123 GDYLVDQGL 131

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF5_HEVBR (Profilin-5 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.062e-47
Identity = 92/124 (74.19%), Postives = 100/124 (80.65%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMCDIDGH LT+AAI+GHDGSVWAQSS FPQFK +E+AA+MKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIY+EP+      NMIVERLG
Sbjct:    1 MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSGFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPL-TPGQCNMIVERLG 123

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF4_HEVBR (Profilin-4 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.000e-47
Identity = 92/124 (74.19%), Postives = 100/124 (80.65%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMCDIDGH LT+AAI+GHDGSVWAQSS+FPQFK +E+AAIMKDF+EPGSLAPTGLHLG TKYMVIQGEPGAVIR              QALI GIY+EP+      NMIVERLG
Sbjct:    1 MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAIMKDFDEPGSLAPTGLHLGSTKYMVIQGEPGAVIRGKKGSGGITVKKTSQALIIGIYDEPL-TPGQCNMIVERLG 123

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF1_MALDO (Profilin-1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.215e-47
Identity = 92/124 (74.19%), Postives = 98/124 (79.03%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQ YVDD LMCDIDGHHLT+AAI+GHDGSVWA SS FP+FKPEEI AIMKDF+EPGSLAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIYEEP+      NMIVERLG
Sbjct:    1 MSWQAYVDDRLMCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPL-TPGQCNMIVERLG 123

HSP 2 Score: 23.0978 bits (48), Expect = 6.215e-47
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  455 GDYLIDQGL 481
            GDYLIDQGL
Sbjct:  123 GDYLIDQGL 131

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF1_RICCO (Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.306e-45
Identity = 90/124 (72.58%), Postives = 97/124 (78.23%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMC+I+G+HLTSAAI+G DGSVWAQSS FPQFKPEEI AIM DF EPGSLAPTGL+L GTKYMVIQGEPGAVIR              QALI GIY+EP+      NMIVERLG
Sbjct:    1 MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSLAPTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPM-TPGQCNMIVERLG 123

HSP 2 Score: 23.0978 bits (48), Expect = 3.306e-45
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  455 GDYLIDQGL 481
            GDYLIDQGL
Sbjct:  123 GDYLIDQGL 131

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF1_LILLO (Profilin-1 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.308e-45
Identity = 87/124 (70.16%), Postives = 96/124 (77.42%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMCD+DG HLT++AIVGHDGS+WAQS+ FPQFKPEEI  IM DF EPGSLAPTGL+L G KYMVIQGEPGAVIR              QALIFGIYEEP+      NM+VER+G
Sbjct:    1 MSWQTYVDDHLMCDVDGQHLTASAIVGHDGSIWAQSAGFPQFKPEEITGIMNDFAEPGSLAPTGLYLAGMKYMVIQGEPGAVIRGKKGSGGVTIKKTGQALIFGIYEEPM-TPGQCNMVVERMG 123

HSP 2 Score: 22.7126 bits (47), Expect = 4.308e-45
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  455 GDYLIDQGL 481
            GDYL+DQGL
Sbjct:  123 GDYLVDQGL 131

[Close]

BLAST of EY749743 vs. ExPASy Swiss-Prot
Match: PROF_CHEAL (Profilin OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.134e-44
Identity = 87/124 (70.16%), Postives = 98/124 (79.03%), Query Frame = 1

Query:   85 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYEEPIGLQDSANMIVERLG 456
            MSWQTYVDDHLMCDI+G+HL+SAAI+GHDG+VWAQS +FPQ KPEE++AIMKDF EPGSLAPTGLHLGGTKYMVIQGEPG VIR              QALI GIY EP+      NM+VER+G
Sbjct:    1 MSWQTYVDDHLMCDIEGNHLSSAAILGHDGTVWAQSPSFPQLKPEEVSAIMKDFNEPGSLAPTGLHLGGTKYMVIQGEPGDVIRGKKGPGGVTIKKTNQALIIGIYGEPM-TPGQCNMVVERIG 123

The following BLAST results are available for this feature:

BLAST of EY749743 vs. ExPASy Swiss-Prot

BLAST of EY749743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77


Match Name	E-value	Identity	Description
PROF3_HEVBR	2.203e-49	76.61	Profilin-3 OS=Hevea brasiliensis PE=1 SV=1	[more]
PROF_PYRCO	1.984e-48	75.81	Profilin OS=Pyrus communis PE=1 SV=1	[more]
PROF6_HEVBR	9.727e-48	74.19	Profilin-6 OS=Hevea brasiliensis PE=1 SV=1	[more]
PROF_LITCN	1.268e-47	74.19	Profilin OS=Litchi chinensis PE=1 SV=1	[more]
PROF5_HEVBR	2.062e-47	74.19	Profilin-5 OS=Hevea brasiliensis PE=1 SV=1	[more]
PROF4_HEVBR	6.000e-47	74.19	Profilin-4 OS=Hevea brasiliensis PE=1 SV=1	[more]
PROF1_MALDO	6.215e-47	74.19	Profilin-1 OS=Malus domestica PE=1 SV=1	[more]
PROF1_RICCO	3.306e-45	72.58	Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1	[more]
PROF1_LILLO	4.308e-45	70.16	Profilin-1 OS=Lilium longiflorum PE=2 SV=1	[more]
PROF_CHEAL	2.134e-44	70.16	Profilin OS=Chenopodium album PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C5-003-079-D07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY749743 ID=EY749743; Name=EY749743; organism=Citrus sinensis; type=EST; length=1028bp
CACCCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACA
ATTGAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACAT
ACGTTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCA
GCTGCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTT
CCCTCAGTTCAAGCCTGAAGAGATTGCTGCAATCATGAAAGATTTTGAAG
AGCCCGGTTCTCTTGCCCCAACTGGTTTGCACCTTGGAGGCACCAAGTAC
ATGGTAATCCAGGGTGAGCCTGGAGCTGTGATTCGTGGAAAAAAGGGTTC
TGGTGGTGTCACCGTCAAGAAAACGGGCCAAGCCCTGATTTTTGGTATAT
ACGAAGAACCCATTGGACTCCAGGACAGTGCCAACATGATCGTTGAGAGG
TTGGGGGGATTATCTCATTGATCAGGGCCTGTAGATCCCCATGTCAACTT
TCAAATGGTTTCCATATATTGGCTTTCCTGGTTTTCGGGCTTTCCCTCTT
CTTTCCAATATTTTGGGCCTTGAACTGGCAAGATTAAAATTTGTTTTGCT
TGCCAAAATAAACTTGGTGGTGAGGAACAAAAAAGGGATTTTTTTTTTTC
CCCCCCTTCTTTTTGGGACTTTAAGGGGTCCCTTTTTTTATACTTTTTTT
TTTTTTCCTCCCCCCAATTTCCTCTATGATTTCCCTTATATTTTTGGGGA
TATGGCGGATTTTAAAACAATTTGAAAACCCTCGGAACCACGGTGTATAA
CCCCCGCAAAAAATAAGATATCGGGGGACCCTCCAATTTTTCTCAAACAC
AAACAAAAAAACACTGGGGGCGGGGCCCCCCCCCTTATTCTCTTTTTTTA
TTCTTTTTATTTTCTTCTAAGTACTATTTATGCTCACTTTACAACCCCCA
TTATACATCTTGACAAATCCCCCAGCCCATGAACCTTAACCAATCATCTA
ACGAAAATTAATAAAACAATGCAGCCGC