EY695007

Overview
NameEY695007
Unique NameEY695007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY695007 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.747e-28
Identity = 65/121 (53.72%), Postives = 79/121 (65.29%), Query Frame = 3 
Query:  225 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 587
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of EY695007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN1.747e-2853.72Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-031-G07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695007 ID=EY695007; Name=EY695007; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGCCACTCCACTATCCTACAACATCTGTCACACTCGAGACA
CCCCAAAAAACAAATAGAAATTGGGAAGTAGAAAAAATCGCATCTGGAAG
ATTCAATTATAGATATTATCAATTACCAACTTGTCTATATAAACAAACAA
TAGAGGAAGTAGCCGATCTCACTGAAGAAGAGGTTAAAGATTTAGAAACT
AGCAGCTAAATTGTAAATTTAAAGATGCTAGAGAAGCTTTGGGACGATGT
TGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGCAGGCTGAGGAAAATCA
CCACAACACCCTTAGCAGTCAAAGAGGGTGGTGAGGCGGAGTCGTCGTCG
GGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGTCCAGGGGCACCGTC
GACGCCAGTGACGCCGACGACGCCGCTGTCGGCGCGTAAGGACAACGTGT
GGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGTATCGGT
GCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTGTTTATGA
CTGGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTGAGTGGATG
ATACGCTCCAGCGATGTAAATGAATGTGATGGGTCACCAACTCACCGGAT
GAGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTCGCAAC
GTGTCCTTGTCGTTTTGTAATGCTATTTGTATTACGTGTCCTTCCTATCT
NAAGTTGGGGTTTAAATGCTGCTGACTANNAGTAACTAAAGACTGTGATG
TTTTATATCATATAATTAATAATGNATGTGATGTGAGGATTGCTAACTGT
GGCGGAGATGAAGGTGCTGGTTTTTGGTTAGGACTGTTTTGATGC
back to top