EY693345

Overview
NameEY693345
Unique NameEY693345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.496e-83
Identity = 180/293 (61.43%), Postives = 202/293 (68.94%), Query Frame = 2
Query:   62 LKQMSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSXXXXXXXXXXXXRSP-SSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWK-MRIRNLLLCGEV*VCLRAYTRVHLVXK-KN*SAC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG-GQLAYFFY 922
            +KQMSHLD+IPSTPGKFK    PYF+R R+ SS+AKL FWS            RSP SSNP   ADPSRRSLRTY WGGPA+EK            G SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLK+ARQALLERSG+F+VEGDIND ALLKKLF+VV FTHVMHLAAQAGVRYAM NP+SYVHSNIAG  +LLE  K    +  ++           T+V    K +      LYAATKKA E++ + Y HIY     G   F   G WG   +AYFF+
Sbjct:    1 MKQMSHLDDIPSTPGKFK----PYFHRTRWQSSVAKLAFWSLVFVGLIFIFFYRSPVSSNP---ADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 286          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.469e-81
Identity = 177/291 (60.82%), Postives = 201/291 (69.07%), Query Frame = 2
Query:   71 MSHLDNIPSTPGKFKM-DKSPYF-NRLRFHSSLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWK-MRIRNLLLCGEV*VCLRAYTRVHLVXK-KN*SAC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG-GQLAYFFY 922
            MSHLD+IPSTPGKFKM DKSP+F +R R+ SS+AKL FWS            RSP SNP    D SRRSLRTY WGGPA+EK           NG+SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYD SLK++RQALLERSG+FIVEGDIND++LLKKLF+VV FTHVMHLAAQAGVRYAM NP SYVHSNIAG  +LLE  K    +  ++           T+V    K +      LYAATKKA E++ + Y HIY     G   F   G WG   +AYFF+
Sbjct:    1 MSHLDDIPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNP----DSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 287          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.164e-78
Identity = 173/292 (59.25%), Postives = 200/292 (68.49%), Query Frame = 2
Query:   71 MSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSXXXXXXXXXXXXRSPSS-NPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXX--NGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWK-MRIRNLLLCGEV*VCLRAYTRVHLVXK-KN*SAC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG-GQLAYFFY 922
            MS LD+IPS+PGKFKM+KS Y +RLRF SSL K  F+S            RSP S NP   +DPSRRSLRT  +GGPA+EK             NGI+VLVTGAAGFVGTHVSAALKRRGDGV+GLDNFNDYYDPSLK+AR+ALLERSGIFIVEGDIND+ LL+KLF +VSFTHVMHLAAQAGVRYAM NP+SYVHSNIAG  +LLE  K +  +  ++           T+V    K K      LYAATKKA E++ + Y HIY     G   F   G WG   +AYFF+
Sbjct:    1 MSRLDDIPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 292          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.077e-63
Identity = 146/291 (50.17%), Postives = 176/291 (60.48%), Query Frame = 2
Query:   71 MSHLDNIPSTPGKFKMDKSPYFNRLRFHS--SLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLE-SWKMRIRNLLLCGEV*VCLRAYTRVHLVXK-KN*SAC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG-GQLAYFFY 922
            MSHLD++PSTPGK+K DK P +  L  H    L+KLT W+             SP  +P         S+    +GG  +EK            G++VLVTGA+GFVGTHVS AL+RRGDGVLGLDNFN YYDP LK+ARQ LLERSG+F+VEGDIND  LL+KLFDVV FTHVMHLAAQAGVRYAM NP SYV+SNIAG  +LLE S     +  ++           ++V    K +      LYAATKKA E + + Y HIY     G   F   G WG   +AYFF+
Sbjct:    1 MSHLDDLPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 291          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.816e-54
Identity = 138/300 (46.00%), Postives = 168/300 (56.00%), Query Frame = 2
Query:   92 PSTPGKFKMDKSPYFNRL--RFHSSLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWKMRIRNLLLCGEV*VCLRAYTRVHLVXKKN*SA------------------C*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG-GQLAYFFY 922
            PSTPGKFK+D+S   NR   R  +S + +  W+             + S     S   S     T  WGG  +EK            GISVLVTGA GFVG+HVS AL++RGDGV+GLDNFN+YYDPSLK+AR++LL   GIF+VEGD+ND  LL KLFDVV+FTHVMHLAAQAGVRYA+ NP SYVHSNIAGL +LLE                +C  A  +  +V   + S                     LYAATKKA E++T+ Y HIY     G   F   G WG   +AYF +
Sbjct:   10 PSTPGKFKIDRS---NRQLHRCFASTSTMFLWALFLIAL-------TASYLSFQSFVDSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLE----------------ICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSF 283          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.357e-49
Identity = 120/239 (50.21%), Postives = 149/239 (62.34%), Query Frame = 2
Query:  221 RSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWKMRIRNLLLCGEV*VCLRAYTRVHLVXKKN*S--AC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG-GQLAYFFY 922
            RS  S  L S+  S  S+     GG A+EK           +G+SVLVTGAAGFVG+H S AL++RGDGVLG DNFNDYYDPSLK+ARQ LLE+  +FIVEGD+ND  LL+KLFDVV FTH++HLAAQAGVRYAM NP SY+ SNIAG  +LLE  K       +       +      +   +++ +     LYAATKKA E++ + Y HIY     G   F   G WG   +AYFF+
Sbjct:   74 RSFLSTGLFSSSSSSSSI-----GGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 307          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.494e-20
Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = 2
Query:  359 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERS-GIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWKMRIRNLLLCGEV*VCLRAYTRVHLV-XKKN*SAC*LYAATKKAVEKLTYLY-HIY 850
            L+TG AGF+G HV+  L   G  V+G D    YYD +LK+ R A+L+RS G   V   + D A L +  ++     ++HLAAQAGVRY++ NP +YV +N+ G  ++LE  K      L+         A  ++      +      LYAATKK++E + + Y H+Y
Sbjct:    4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLY 170          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 69/183 (37.70%), Postives = 92/183 (50.27%), Query Frame = 2
Query:  359 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLESWK-MRIRNLLLCGEV*VCLRAYTRVHLVXKKN*SAC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG 898
            LVTGAAGF+G HVS  L   G  V+G+DN NDYYD SLK+AR  LL + G    + D+ D   +  LF    F  V     +  VRY++ NP++Y  SN+ G  ++LE  +  +I++LL      V                    LYAATKKA E + + Y H+Y     G   F   G WG
Sbjct:    4 LVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKIQHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFFTVYGPWG 186          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 64/186 (34.41%), Postives = 100/186 (53.76%), Query Frame = 2
Query:  350 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLE-SWKMRIRNLLLCGEV*VCLRAYTRVHLVXKKN*SAC*LYAATKKAVEKLTYLY-HIYDYL*LG-EVFHGNGLWG 898
            + +L+TG AGF+G+H++  L ++G  V+G+D+ NDYY  SLK+ R   + +      +  + +   L K+F       V++LAAQAGVRY++ NP +Y+ SNI G  ++LE S    I+NL+      V     ++             LYAATKK+ E + + Y H+Y+    G   F   G WG
Sbjct:    1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNLIYASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLRFFTVYGPWG 186          
BLAST of EY693345 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 52/168 (30.95%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  353 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLER-SGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMHNPNSYVHSNIAGLXSLLE-SWKMRIRNLLLCGEV*VCLRAYTRVHLVXKKN*SAC*LYAATKKAVEKLTYLYH 844
            ++LVTG+AGF+G H+S  L    +   V+G+DN N+YY+P LK+ R  +L+       ++ D +D   L +         ++HL AQAGVRY++ NP +Y+ SN  G  ++ E + +  I  ++      V             +      LYA+TK++ E + ++YH
Sbjct:    5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYH 172          
The following BLAST results are available for this feature:
BLAST of EY693345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GAE3_ARATH3.496e-8361.43UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thali... [more]
GAE2_ARATH1.469e-8160.82UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thali... [more]
GAE4_ARATH1.164e-7859.25UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thali... [more]
GAE5_ARATH3.077e-6350.17UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thali... [more]
GAE1_ARATH5.816e-5446.00UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thali... [more]
GAE6_ARATH7.357e-4950.21UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thali... [more]
LPSL_RHIME5.494e-2036.53UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti... [more]
YCL2_ECO111.599e-1937.70Uncharacterized 37.6 kDa protein in cld 5'region O... [more]
CAPI_STAAU1.599e-1934.41Protein capI OS=Staphylococcus aureus GN=capI PE=3... [more]
Y1055_METJA1.004e-1330.95Uncharacterized protein MJ1055 OS=Methanocaldococc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-010-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693345 ID=EY693345; Name=EY693345; organism=Citrus sinensis; type=EST; length=940bp
CCACGCGTCCGCTAAAATCAAAAAGAAAAAAAGAAAAAAAAAAAACTCGC
AAATGTCACAGCTAAAACAAATGTCCCATCTTGATAACATTCCCTCAACT
CCTGGCAAATTCAAGATGGACAAATCCCCATATTTTAACAGACTCCGATT
CCATTCTTCTTTAGCAAAGCTCACATTTTGGTCCTTCATTTTCTTAGCCG
TAATCTTGATTTTCTTCTTTAGATCCCCATCGTCCAATCCTCTACCCTCT
GCCGATCCATCTCGCCGTTCACTTCGCACTTACGACTGGGGTGGCCCCGC
TTTTGAGAAACGGGTCAGGTCGTCGGCCCGGGTCAGGGCCAGAAATGGCA
TCTCTGTTTTGGTCACTGGTGCCGCTGGTTTTGTGGGCACCCACGTGTCA
GCTGCCCTCAAAAGGCGCGGTGATGGTGTTCTTGGTCTTGATAATTTCAA
TGACTATTATGACCCTTCTTTGAAGAAAGCAAGGCAAGCGCTTTTGGAGC
GAAGTGGAATTTTTATCGTTGAAGGTGATATAAATGACATGGCTCTTTTG
AAGAAACTCTTCGATGTCGTGTCTTTTACGCACGTGATGCATTTGGCTGC
ACAAGCTGGTGTGAGGTATGCCATGCACAATCCTAATTCTTATGTGCACA
GTAACATTGCTGGTCTTGNTAGTTTACTTGAAAGTTGGAAAATGCGAATC
CGCAACCTGCTATTGTGTGGCGAAGTCTAGGTCTGTTTACGGGCTTATAC
CAGGGTGCATTTAGTGNAAAAAAAAAACTGATCAGCCTGCTAGTTATATG
CTGCTACTAAAAAGGCGGTGGAGAAATTGACATACTTATATCACATTTAT
GATTATCTTTGACTGGGTGAGGTTTTTCATGGTAATGGCCTTTGGGGAGG
CCAATTGGCATATTTCTTTTACAGGGACTTTTGAATGGAA
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