EY693341

Overview
NameEY693341
Unique NameEY693341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693341 vs. ExPASy Swiss-Prot
Match: NEK7_ARATH (Serine/threonine-protein kinase Nek7 OS=Arabidopsis thaliana GN=NEK7 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.123e-20
Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1
Query:  175 KQIIKSMLRKNPEHRPTASDLLRHPHLQPYLLRCQNPSSVYL---PIKPTNIMKEKTRKSPSSKHNSRKDKGEREAAAPNQLENVRSVAKNIAVQLNNLPLDDKPTSSTS-TEDNLETKKVDPTSYTMEVSSSINDFKERS-TPTETSECSRDKPAHFN 636
            KQ+IK MLRK PE+RPTA +LLR+P LQPYLL+CQN S +YL   PIKP N  K+K R++       ++     ++     LEN+     N     ++     +P SST+  ED LETK++DP+  T+++S   +   + S    + +  S + PA  N
Sbjct:  247 KQMIKLMLRKKPEYRPTACELLRNPSLQPYLLQCQNLSPIYLPVFPIKPVNSPKDKARRNSLPGKFGKERVSREKSEVSRSLENLYPFWTNTETGSSS---SSQPASSTNGAEDKLETKRIDPSCDTLKISEFTSQKSDESLIDPDIAVYSTETPAEEN 402          
BLAST of EY693341 vs. ExPASy Swiss-Prot
Match: NEK6_ORYSJ (Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica GN=NEK6 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.206e-15
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 1
Query:  175 KQIIKSMLRKNPEHRPTASDLLRHPHLQPYLLRCQNPSSVYLPIKPTNIM---KEKTRKSPSSKHNSRKDKGEREA--AAPNQLENVRSVAKNIAVQLNNLPLDDKPTSSTSTEDNLETK---KVDPTSYTMEVSSSINDFKER 582
            KQI+KSMLRKNPEHRPTA +LLRHP+LQPYL    + S +YLP+KPT      K+++RK  S +    K  G  EA   A  Q  + R  +  I+  ++ +   D   S  S +     K    +D  +   ++  ++    +R
Sbjct:  231 KQIVKSMLRKNPEHRPTAGELLRHPYLQPYLAESCSCSPIYLPVKPTKSNLGDKQQSRKPGSGRKRIIKTNGSSEALETAAEQAVDTRDNSTYIS-DVSTVGTQDACISQVSVDPQARNKAYQNIDDLTLFQQIEENLMTITDR 373          
BLAST of EY693341 vs. ExPASy Swiss-Prot
Match: NEK6_ARATH (Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.274e-14
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  175 KQIIKSMLRKNPEHRPTASDLLRHPHLQPYLLRCQNPSSVYLPI---KPTNIMKEKTRKSPSS-------KHNSRKDKGERE 390
            K++IKSMLRKNPEHRPTA++LLRHPHLQPYL +CQN S V+ P+      N  + +T   P +       KHN   ++ E++
Sbjct:  231 KRLIKSMLRKNPEHRPTAAELLRHPHLQPYLAQCQNLSPVFKPVVSKSEHNTNENRTGLPPKTKSAKTPIKHNQESEETEKK 312          
BLAST of EY693341 vs. ExPASy Swiss-Prot
Match: NEK2_ORYSI (Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica GN=NEK2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 1
Query:  181 IIKSMLRKNPEHRPTASDLLRHPHLQPYLLRCQ---NPSSVYLPIKPTNIMKEKTRKSPSSKHNSRKDKGEREAAAPNQLENVRSVAKNIAVQLNNLPLDDKPTSSTSTEDNLETKKVDPTSYTMEVSS 558
            +IKSMLRK+PEHRP+A+ LL+HP LQPY+L+ Q   +P+   LPI  +   K K    PS       D   R  A  N L N R+V  +      N     +     +T  ++E   VD +    EV+S
Sbjct:  234 LIKSMLRKSPEHRPSAAQLLKHPQLQPYVLQVQLKSSPTRNILPIHQSLTDKVKKMTFPSDV----VDSARRRMARRNSLGNERTVTFSKPSPERNSVSSTRSIKEYTTTQSVEGLSVDSSEAGDEVTS 358          
The following BLAST results are available for this feature:
BLAST of EY693341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
NEK7_ARATH2.123e-2038.36Serine/threonine-protein kinase Nek7 OS=Arabidopsi... [more]
NEK6_ORYSJ1.206e-1536.11Serine/threonine-protein kinase Nek6 OS=Oryza sati... [more]
NEK6_ARATH2.274e-1448.78Serine/threonine-protein kinase Nek6 OS=Arabidopsi... [more]
NEK2_ORYSI5.241e-1136.43Serine/threonine-protein kinase Nek2 OS=Oryza sati... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-010-E09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693341 ID=EY693341; Name=EY693341; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGAATGTAAGTATCTCTCGCAATCCTATTACAGATATTCGA
TGTTTCTCAAGGACCACTCTAGTTCATATAACACACATGCAATTGCCCTT
TTTCCCCATGATTCCATATTTTATCTTACAATATCATATATGTATTTACT
GAGATGGCATTTTAATATCACAGGAAACAAATTATTAAAAGCATGCTAAG
GAAGAACCCAGAACATAGACCAACTGCTTCAGACCTGTTGAGGCATCCGC
ATTTACAGCCATATCTCCTTCGATGCCAAAACCCATCTTCTGTTTATCTT
CCAATAAAGCCGACAAACATTATGAAGGAGAAAACAAGAAAATCACCATC
TAGCAAACATAATAGTCGCAAGGATAAGGGGGAGAGAGAGGCAGCAGCAC
CTAACCAGTTGGAAAATGTTCGTTCAGTAGCGAAAAATATTGCTGTACAG
CTCAACAATCTACCTCTCGATGACAAGCCAACTTCCAGTACTAGTACAGA
AGACAACCTTGAGACCAAGAAAGTTGATCCTACTAGCTACACAATGGAAG
TCTCCAGCTCCATCAATGATTTCAAAGAAAGGTCCACTCCAACTGAGACA
AGTGAATGCAGCAGAGACAAGCCAGCTCACTTTAATGGCAGCACTGGCTC
TGACTTAACTCAGAGATACAGCAAATTCTCAGAATGAAATACAAAAACCT
GCTGATGCCCTGTACAACCGCAGAAAAAATANATTTCNAGAACTGGAAAA
ATAAAAATCAAATCCTTTTAGCGATCGAGTTATTGAAAAGCTTGATATGA
GGGGGAGAACGCTGTTCCCTTGGCCTGGGGGAAAAAACCCCCCCCAGGGA
GGTG
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