EY693332

Overview
NameEY693332
Unique NameEY693332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693332 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.421e-12
Identity = 30/67 (44.78%), Postives = 52/67 (77.61%), Query Frame = 2
Query:   23 VGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQ 223
            V ++++K +++G+RRHFHDDI+VIV+YLD H +G  ++R   ++  CT+APVDI+S N+ ++ + +Q
Sbjct:  308 VSFRDLKTIEKGVRRHFHDDISVIVVYLDRH-RGRRHTRVVDSSSNCTNAPVDIYSSNSGQSVETLQ 373          
BLAST of EY693332 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.421e-12
Identity = 30/67 (44.78%), Postives = 52/67 (77.61%), Query Frame = 2
Query:   23 VGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQ 223
            V ++++K +++G+RRHFHDDI+VIV+YLD H +G  ++R   ++  CT+APVDI+S N+ ++ + +Q
Sbjct:  308 VSFRDLKTIEKGVRRHFHDDISVIVVYLDRH-RGRRHTRVVDSSSNCTNAPVDIYSSNSGQSVETLQ 373          
BLAST of EY693332 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.129e-12
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   29 YKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHMLHPL 241
            Y +IK ++RG RR+FHDDITV+V+YLDHH+ G   +    N+   T+APVDIFS +++E +       HPL
Sbjct:  317 YTDIKHIERGSRRNFHDDITVVVVYLDHHKHGVRPNLGNRNSFRFTNAPVDIFSGSSEEVDH------HPL 381          
BLAST of EY693332 vs. ExPASy Swiss-Prot
Match: P2C63_ARATH (Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.129e-12
Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 2
Query:   29 YKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAE 211
            Y +IKK+ +GIRRHFHDDI+VIV+YLD ++  SSNS+      G  +AP DI+SL++DEAE
Sbjct:  313 YGDIKKIAKGIRRHFHDDISVIVVYLDQNKTSSSNSKLVKQ--GGITAPPDIYSLHSDEAE 371          
The following BLAST results are available for this feature:
BLAST of EY693332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
P2C34_ORYSJ2.421e-1244.78Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI2.421e-1244.78Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C78_ORYSJ4.129e-1247.89Probable protein phosphatase 2C 78 OS=Oryza sativa... [more]
P2C63_ARATH4.129e-1257.38Probable protein phosphatase 2C 63 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-010-D12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693332 ID=EY693332; Name=EY693332; organism=Citrus sinensis; type=EST; length=586bp
CCACGCGTCCGCGGACGCGTGGGTGGGATATAAGGAGATAAAGAAACTCA
AAAGGGGAATAAGGCGACATTTCCATGACGATATTACAGTAATTGTAATT
TATCTTGATCATCATCAAAAAGGCTCCTCCAACAGCAGATCCAAACACAA
TGCCATTGGCTGCACAAGTGCACCTGTCGACATCTTCTCCCTAAATGCAG
ATGAAGCAGAAGATGATGTGCAGCATATGCTTCACCCGCTTCCTGCATAA
GTAAACCACTTTCTAAATGGTCAGGCACTGACGCATAGAAATTTCAATAA
GGTTACGAGTACATGGTGAGGTATACGCAGGCAATTTCTGTAGATAGGTT
GCTGTTGGAAACAAGCTGCAGTAGATTTTTCCAAGTGAAGATCCAACACC
ATTGTTCTTTTGTTTTGTTGGTTATGTTATTGATCTTGTCTTTGTTCAAA
ATTGATATAGTGAATCCCAGAAATTTCAAGCACAAGTTTTGTAACCATTT
TGTTTTGCATAGTCTAGAAGATAACAGAGTTTTGATATCTCTACAAAGAT
ATATGATGAATTGAAAATTGAAAAAAAAAAAAAAAA
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