EY693271

Overview
NameEY693271
Unique NameEY693271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693271 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.376e-43
Identity = 88/145 (60.69%), Postives = 106/145 (73.10%), Query Frame = 2
Query:  299 HTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQD 733
            HTC+RNE +L+EC+  W+ KGF+VTGSVCD S R EREKL+  VSS+F GKL+ILINN+G    K T++YTAEDFSF ++TN ESAY+L QLAHPLLKASG  +I+ M              IY ATKGA+N LAR LACEWA D
Sbjct:   42 HTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFM-SSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185          

HSP 2 Score: 22.3274 bits (46), Expect = 3.376e-43
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  736 IXTNSVSPWVVATPL 780
            I  N+V+P V+ATPL
Sbjct:  187 IRANAVAPAVIATPL 201          
BLAST of EY693271 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.153e-42
Identity = 83/145 (57.24%), Postives = 104/145 (71.72%), Query Frame = 2
Query:  299 HTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQD 733
            +TCSR++ DL EC+  W+ KGFKV+G VCDVSS  +R+ L+  V+S F+GKLNILINN GTTI K    +TAED+S +M TNFE++YNLCQLAHPLLKASG ASIV                IY A+KGA+N + + LACEWA+D
Sbjct:   45 YTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIV-FNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKD 188          

HSP 2 Score: 25.0238 bits (53), Expect = 2.153e-42
Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  736 IXTNSVSPWVVATPLL 783
            I  N+V+PW++ TP++
Sbjct:  190 IRVNAVAPWIINTPII 205          
BLAST of EY693271 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36
Identity = 74/145 (51.03%), Postives = 101/145 (69.66%), Query Frame = 2
Query:  299 HTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQD 733
            +TCSRN+ +L++C+  W++KGFKV  SVCD+SSR ER++L+N V++ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +              +YGATKGAM+ L R LA EWA+D
Sbjct:   37 YTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFI-SSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 180          
BLAST of EY693271 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.621e-36
Identity = 69/145 (47.59%), Postives = 99/145 (68.28%), Query Frame = 2
Query:  299 HTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQD 733
            +TCSRNE +L EC+  W+ KG  V GSVCD+ SR ER+KL+  V+ +FDGKLNIL+NN G  I K   ++T +D++ +M TNFE+AY+L Q+A+PLLKAS   +++ +              +Y A+KGA+N + + LACEWA+D
Sbjct:   49 YTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFL-SSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKD 192          

HSP 2 Score: 22.3274 bits (46), Expect = 7.621e-36
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  736 IXTNSVSPWVVATPLL 783
            I  NSV+P V+ TPL+
Sbjct:  194 IRVNSVAPGVILTPLV 209          
BLAST of EY693271 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.476e-35
Identity = 74/145 (51.03%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  299 HTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQD 733
            +TCSRN+ +L EC+  W++KGF V  SVCD+SSR ERE+ +  VS+ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +              +YGATKGAM+ L R LA EWA+D
Sbjct:   37 YTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFI-SSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKD 180          
The following BLAST results are available for this feature:
BLAST of EY693271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TRNH1_ARATH3.376e-4360.69Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRNH_DATST2.153e-4257.24Tropinone reductase homolog OS=Datura stramonium P... [more]
TRN2_DATST1.335e-3651.03Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
TRN1_DATST7.621e-3647.59Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_HYONI1.476e-3551.03Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-G10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693271 ID=EY693271; Name=EY693271; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGTGTGAAGTTCACTTTAACTTTTATCACCTTTATTTCGA
ATGGCGCCTCCGACGAACGGCAATGGCAGGCTCAATCAGAGATGGACTGT
CCAGGGAATGACTGCGCTTGTAACTGGTGGAACCAAAGGACTAGGGTTCT
TAATCGATTCTTATCTCTCTAGCTAGCTCTTATATGCATTCCTTTCCTAT
TAATAGTGCCTGCATGTGCTCATATTTTTGTTTCTGTTATTGGTGCATTG
ACTAGTCATGCTGTAGTGGAGGAACTGGCTGAGCTTGGTGCCGCTGTGCA
TACATGCTCTAGGAATGAAGCAGATCTTAGTGAATGCATACGTGACTGGA
AAACTAAAGGCTTCAAAGTCACCGGTTCAGTGTGCGATGTATCATCTCGA
ATTGAACGGGAAAAGCTTATAAACCAAGTCTCCTCTCTGTTCGATGGAAA
ACTTAACATTCTCATAAACAACGTCGGGACGACTATAAGAAAGGCGACTG
TGGAGTACACAGCAGAAGATTTCTCGTTTCTCATGGCTACCAATTTTGAG
TCTGCTTACAATCTGTGCCAACTTGCACATCCTCTTTTGAAAGCTTCGGG
GGCAGCAAGTATTGTTCTAATGTCTTCTGTTTGTGGGGTGGTGTCAGTTG
TTGACGTTGGATCCATATATGGAGCTACGAAAGGAGCCATGAACCATCTT
GCGAGGATTTTGGCATGCGAGTGGGCTCAAGATATATTANGACCAATTCT
GTCTCACCTTGGGTCGTCGCGACTCCCTTACTGAATCTTTTCTGATGATG
ANGCATTTTTAAGGAAGTCGAGGGTCGACTCCATGAGACGCCCGGGGAGC
CAATGAATATCTTCATGGGAGCATTTTATGCTGCTGCAGCTC
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