EY693269

Overview
NameEY693269
Unique NameEY693269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693269 vs. ExPASy Swiss-Prot
Match: AMAB2_BACST (N-carbamoyl-L-amino acid hydrolase OS=Bacillus stearothermophilus GN=amaB PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = -3
Query:   31 INGERLWASLMAMAEIGATARGGSCRLALSAEDQAGRVLFSRWCEDAGLTLSVDAIGNLFARRAGTDNEAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVIRSLDDHGIKTRKPLEIAVWTNEEGARFTPAMLGSAVFTGTL 456
            I GERLW  LM + E+G    GG  RL+ +AE++  + L + +  +AGL +  DA GNL  R+ GT+ +A  V++GSHLD+   GG FDG  GVLAG+EV++++++HG+ T  P+E+  +T+EEGARF   M+GS    GTL
Sbjct:    2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTL 143          
BLAST of EY693269 vs. ExPASy Swiss-Prot
Match: AMAB1_BACST (N-carbamoyl-L-amino acid hydrolase OS=Bacillus stearothermophilus GN=amaB PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = -3
Query:   31 INGERLWASLMAMAEIGATARGGSCRLALSAEDQAGRVLFSRWCEDAGLTLSVDAIGNLFARRAGTDNEAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVIRSLDDHGIKTRKPLEIAVWTNEEGARFTPAMLGSAVFTGTL 456
            I GERLW  LM + E+G    GG  RL+ +AE++  + L + +  +AGL +  DA GNL  R+ GT+ +A  V++GSHLD+   GG FDG  GVLAG+EV++++++HG+ T  P+E+  +T+EEGARF   M+GS    GTL
Sbjct:    2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTL 143          
BLAST of EY693269 vs. ExPASy Swiss-Prot
Match: HYUC_PSESN (Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = -3
Query:   37 INGERLWASLMAMAEIGATARGGSCRLALSAEDQAGRVLFSRWCEDAGLTLSVDAIGNLFARRAGTDNEAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVIRSLDDHGIKTRKPLEIAVWTNEEGARFTPAMLGSAVFTG 456
            I+ ERL   +  + EIG T   G  RLALS ED+   +L S W  +AGLT++ D  GNL  R+ G       VM+GSH+D+   GG+FDGV GVLAG+E++ ++ +  +     +E+  +  EEG+RF   + GS    G
Sbjct:    6 ISKERLRIHIEQLGEIGKTKDKGVQRLALSKEDREATLLVSEWMREAGLTVTHDHFGNLIGRKEGETPSLPSVMIGSHIDSVRNGGKFDGVIGVLAGIEIVHAISEANVVHEHSIEVVAFCEEEGSRFNDGLFGSRGMVG 145          
BLAST of EY693269 vs. ExPASy Swiss-Prot
Match: Y588_HAEIN (Uncharacterized hydrolase HI0588 OS=Haemophilus influenzae GN=HI0588 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = -3
Query:    1 RLALSAEDQAGRVLFSRWCEDAGLTLSVDAIGNLFARRAGTDNEAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVIRSLDDHGIKTRKPLEIAVWTNEEGARFTPAMLGSAVFTGTLALDKALATQD 381
            RLA + ED+    +    C++  L++  D+IGNLF R+AG ++    V  GSH+DT    G+FDG  G +AGLE++  L +  I+TR PLE+ ++T EE +RF  A LGS V  G +  +K  + +D
Sbjct:   27 RLAFTEEDEKAHNMIIELCKEYDLSIRRDSIGNLFIRKAGKEDFLPAVAFGSHIDTVVNAGKFDGPLGSVAGLEILLQLCEQNIQTRYPLELIIFTCEESSRFNFATLGSKVMCGIVNQEKLSSLRD 153          
BLAST of EY693269 vs. ExPASy Swiss-Prot
Match: ALLC_BACSU (Allantoate amidohydrolase OS=Bacillus subtilis GN=pucF PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = -3
Query:    1 MAEIGATARGGSCRLALSAEDQAGRVLFSRWCEDAGLTLSVDAIGNLFARRAGTDNEAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVIRSLDDHGIKTRKPLEIAVWTNEEGARFTPAMLGSAVFTGTLALDKALATQD 420
            +A+ GA+A GG  RL  + E    ++         GL    D +GN+F R +GT +    ++ GSH+DT   GG++DG YGVLA +  ++ L +     +K LE      EEG+RF     GS   TG  +   A   +D
Sbjct:   19 LAQYGASADGGVTRLLYTKEWMDAQLAVKTEMSSFGLETRFDDVGNVFGRLSGTQSPDEVIVTGSHIDTVINGGKYDGAYGVLAAMLALKQLKETYGAPKKTLEAVSLCEEEGSRFPMTYWGSGNMTGVFSEQDAKEPRD 158          
BLAST of EY693269 vs. ExPASy Swiss-Prot
Match: AAH_ARATH (Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13
Identity = 36/114 (31.58%), Postives = 65/114 (57.02%), Query Frame = -3
Query:    7 LFSRWCEDAGLTLSVDAIGNLFARRAGTDNEAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVIRSLDDHGI--KTRKPLEIAVWTNEEGARFTPAMLGSAVFTGTLALDKALAT 342
            L   W EDAGL+  VD +GN+  R    +  +  +++GSH+DT  + G++DG  G+++ +  ++ L   G   + ++P+E+  +++EEG RF    LGSA   G + + +   T
Sbjct:  128 LIRGWMEDAGLSTWVDYMGNVHGRVEPKNGSSQALLIGSHMDTVIDAGKYDGSLGIISAISALKVLKIDGRLGELKRPVEVIAFSDEEGVRFQSTFLGSAALAGIMPVSRLEVT 241          
The following BLAST results are available for this feature:
BLAST of EY693269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AMAB2_BACST2.193e-3145.77N-carbamoyl-L-amino acid hydrolase OS=Bacillus ste... [more]
AMAB1_BACST2.193e-3145.77N-carbamoyl-L-amino acid hydrolase OS=Bacillus ste... [more]
HYUC_PSESN7.555e-2440.00Hydantoin utilization protein C OS=Pseudomonas sp.... [more]
Y588_HAEIN2.971e-2040.16Uncharacterized hydrolase HI0588 OS=Haemophilus in... [more]
ALLC_BACSU2.877e-1533.57Allantoate amidohydrolase OS=Bacillus subtilis GN=... [more]
AAH_ARATH4.594e-1331.58Allantoate deiminase, chloroplastic OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693269 ID=EY693269; Name=EY693269; organism=Citrus sinensis; type=EST; length=890bp
ATCCTGTGTGGCCAGCGCCTTGTCCAACGCCAAGGTGCCGGTGAACACCG
CCGAGCCGAGCATCGCCGGAGTAAAACGGGCGCCCTCCTCGTTGGTCCAC
ACCGCGATTTCCAGTGGTTTGCGGGTCTTGATGCCGTGGTCGTCGAGGCT
GCGGATCACCTCCAATCCGGCCAGCACACCATAGACACCATCAAAGCGCC
CGCCTTCCGGCTGGGTGTCAAGGTGGCTGCCCATCATCACTGGGGCTGCT
TCATTGTCCGTACCGGCGCGGCGGGCGAACAGGTTGCCAATGGCATCGAC
GCTCAAGGTCAGCCCGGCATCTTCACACCAGCGGCTGAACAGCACGCGAC
CCGCCTGGTCTTCGGCGCTCAACGCCAGGCGGCAACTGCCACCGCGGGCC
GTGGCGCCGATCTCGGCCATGGCCATCAGGCTGGCCCACAGGCGCTCGCC
ATTAATCTTCAACATAGACACTCTCCAATCAAACGCTTCAAGCCATTTCA
AGGCGGTGGGCGGTGGCGTGACGACGGGACAACGCGAGTACGCACACCAG
CGAAACCGCCGCGATCGCGCTGTAGAACACTGCCATCGGCCACCACTGGC
CCTGGTATTCATGGGCCAGCCAGGTGCCGATCAACGGCGTGAGTCCACCG
GTCAGCGCGCCACACACTTGGTATGGNCAGGAGATGGCGGTGTAACGCAC
GCGGGTTTCGAACAGGCCGCTGACGAAGCCGGCGATCACGGCATAAAACG
AGGTCATGCACACCACGGCNAGGTGATGCAAGGATGATCATCGGCGCCTG
GCCGCTGCTGACAGCACGACATCGGATACGGGAGGCATCGCGAGCCTGTC
ATCGCACACAAAAGCGTGTGCACCGACTTCTCCGCACCAG
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