EY693265

Overview
NameEY693265
Unique NameEY693265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693265 vs. ExPASy Swiss-Prot
Match: PSA_MOUSE (Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.699e-11
Identity = 44/145 (30.34%), Postives = 67/145 (46.21%), Query Frame = 3 
Query:   18 LELEQSQFLSSGSPGDG---QWIVPITLCCGSY-DVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNL 440
            L+L Q +F +SG  G     QW+VPIT+      +  K  +L +K +           + K      W+KLN+   GFYR +Y   +   L   I    L   DR G+ +D F+L  A   +   +L +M ++  E  YTV S+L
Sbjct:  520 LKLSQKKFCASGPYGGEDCPQWMVPITISTSEDPNQAKLKILMDKPEM--------SVVLKNVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDL 656

HSP 2 Score: 24.6386 bits (52), Expect = 9.699e-11
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  568 GESHLDALLRG 600
            GE HLDALLRG
Sbjct:  698 GEGHLDALLRG 708

HSP 3 Score: 21.9422 bits (45), Expect = 9.699e-11
Identity = 8/19 (42.11%), Postives = 11/19 (57.89%), Query Frame = 2 
Query:  509 QFFISLFQNSAEKLGWDSK 565
            +F   +F    E+LGWD K
Sbjct:  678 EFVKDVFSPIGERLGWDPK 696
The following BLAST results are available for this feature:
BLAST of EY693265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PSA_MOUSE9.699e-1130.34Puromycin-sensitive aminopeptidase OS=Mus musculus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-G04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693265 ID=EY693265; Name=EY693265; organism=Citrus sinensis; type=EST; length=826bp
CCACGCGTCCGGAGAAACTAGAACTTGAACAGTCACAATTCTTGTCAAGT
GGTTCCCCTGGGGATGGACAATGGATTGTTCCAATAACATTGTGCTGTGG
CTCGTATGATGTGTGCAAGAATTTCTTATTGTATAATAAGTCTGATTCTT
TTGATATCAAGGAGTTACTGGGTTGTTCAATTAGTAAAGAAGGTGATAAT
GGGGGTTGGATAAAATTGAATGTGAATCAGACTGGTTTCTACAGAGTGAA
ATACGATAAGGACCTTGCAGCTAGGCTTGGATATGCAATAGAGAAGAAAC
AGTTATCTGAAACTGACAGATTTGGTATTTTGGACGATCATTTTGCCCTT
TGTATGGCTCGCCAGCAGACTTTGACATCTTTGCTTACCTTGATGGCCTC
TTATAGCGAGGAAACTGAATATACTGTTCTATCAAACTTGATTACTATAA
GCTATAAAATTGGGAGGATAGCAGCTGATGCGAGACCTGAATTACTGGAC
TACCTTAACAATTTTTCATCAGCCTCTTTCAGAATTCTGCTGAGAAGCTT
GGTTGGGATTCTAAACAGGTGAAAGTCATTTGGATGCATTGTTGAGAGGA
GAATTTTCACTGCCCTTGCTTTGCTTGGGCATAAAGAGACCCTAAATGAG
CAAGCAAGCGATTCCATGCATTCTTAGCTGACAGACTACCCCACTCCTAC
CTCCTGACATAGAAAGCAGCATATGTGGCTGTAATGCAAAAGTCAGCGCT
CAAAAGATCGGGTATGAATCCTTCTGAAGTTTACGAAAACTGTCTGACCC
GGAAAAACCCCATTCTAAGTCGTTGG
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