EY693259

Overview
NameEY693259
Unique NameEY693259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.781e-47
Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 3
Query:   45 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGSNXXXXXXXXXXXXXXXEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            R+  +R+ FE+L +N LN+PVI +  +      +D ++ A                  E P  D  FLR  SF++LQ  R+R +KT+++SCPSCGRTLF+LQ+++  I+ +TSHLPGV IAIMGCIVNGPGEMADADFGYVG  PGKIDLYVGK  V++ I    A D L+ LI+ HGRW EP
Sbjct:  470 RLHYSRQFFEWLQQNQLNYPVILNFTYQG--ENEDTILLASMECGSLLCDGLGEGVWLEGP-YDILFLRQLSFSILQAARLRMSKTDFISCPSCGRTLFNLQDVTKRIQSRTSHLPGVKIAIMGCIVNGPGEMADADFGYVGSKPGKIDLYVGKECVEKDIDFADADDRLVNLIRAHGRWIEP 649          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.604e-40
Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 3
Query:  231 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            +D + +   S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  PGK+ LY GK +V + +  E A + L+QLIKD+G W +P
Sbjct:  540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSEIADEKLVQLIKDNGLWQDP 660          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.051e-39
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 3
Query:  231 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            +D + +   S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  PGK+ LY GK +V + +  E A + L+QLIKD+  W +P
Sbjct:  540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSEIADEKLVQLIKDNELWQDP 660          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.514e-38
Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 3
Query:  231 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAE 590
            +D + +   S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  PGK+ LY GK +V + +  E A + L++LIK HG W +
Sbjct:  540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEKLVELIKKHGLWQD 659          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.514e-38
Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 3
Query:  231 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAE 590
            +D + +   S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  PGK+ LY GK +V + +  E A + L++LIK HG W +
Sbjct:  540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEKLVELIKKHGLWQD 659          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.871e-37
Identity = 73/121 (60.33%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  234 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            D    R   F++LQ   +R+T  EY+SCP CGRTLFDL E+S  I+E+T HLPG + IA+MGCIVNGPGEMADADFGYVG  PG IDLYV    VK  + ME A + LIQL+K+HG W EP
Sbjct:  480 DLKLARTLGFSILQSANIRSTTVEYISCPGCGRTLFDLPEVSQRIKERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSYVPMENAEEELIQLLKEHGVWKEP 600          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.417e-36
Identity = 71/111 (63.96%), Postives = 86/111 (77.48%), Query Frame = 3
Query:  261 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            FN+LQ    R T+ +YVSCPSCGRTL+++QE +A IR+ T HL GV IA+MGCIVNGPGEMADADFGYVGGAP KI+LYV  T VK  I  E A + L+ LIK++GRW +P
Sbjct:  474 FNILQATGTRLTRADYVSCPSCGRTLYNIQEATARIRKATEHLKGVKIAVMGCIVNGPGEMADADFGYVGGAPNKINLYVKHTPVKFNIPQEEAVERLVDLIKEYGRWVDP 584          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLCV (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila caviae GN=ispG PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.186e-36
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 3
Query:  219 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            + P      +R+ +F+ LQ   +R  KTEY+SCP CGRTLFDL E++  IREKT HL G+ IA+MGCIVNGPGEMAD+DFG+VG   G IDLYV  T VK  I ME A + L++L+++HG W +P
Sbjct:  481 DLPNVSLPTVREIAFSTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTTRIREKTKHLVGLKIAVMGCIVNGPGEMADSDFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELVRLLQEHGVWKDP 605          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLPN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia pneumoniae GN=ispG PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.567e-35
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = 3
Query:  258 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            +F  LQ   +R  KTEY+SCP CGRTLFDL+E++  IR++T HLPG+ IAIMGCIVNGPGEMADADFG+VG   G IDLYV  T VK  I ME A + LI+L+++HG W +P
Sbjct:  495 AFGTLQNAGVRLVKTEYISCPMCGRTLFDLEEVTTRIRKRTQHLPGLKIAIMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELIRLLQEHGVWKDP 606          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila abortus GN=ispG PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.673e-35
Identity = 69/125 (55.20%), Postives = 86/125 (68.80%), Query Frame = 3
Query:  219 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            + P      +R+ +F  LQ   +R  KTEY+SCP CGRTLFDL E++  I E+T HL G+ IA+MGCIVNGPGEMADADFG+VG   G +DLYV  T VK  I ME A D L+ L+K+HG W +P
Sbjct:  481 DLPNIPLSTVREIAFGTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTKRIHERTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMVDLYVKHTCVKAHIPMEQAEDELVLLLKEHGVWKDP 605          
The following BLAST results are available for this feature:
BLAST of EY693259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
ISPG_PARUW6.781e-4750.824-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIN3.604e-4061.984-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIC3.051e-3961.164-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBL1.514e-3860.004-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBJ1.514e-3860.004-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLMU4.871e-3760.334-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_AKKM81.417e-3663.964-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLCV9.186e-3655.204-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLPN1.567e-3561.614-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLAB2.673e-3555.204-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693259 ID=EY693259; Name=EY693259; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCATGATTTACCCTTTAATGAAGATAAAATTGGCAGAGTA
CAGGCAGCTAGGAGGCTATTTGAGTATCTATCAGAAAATAATCTAAACTT
CCCTGTAATTCACCATATTCAGTTTCCGAATGGGATTCACAGGGATGACT
TGGTCATTGGTGCCGGTTCCAATGTAGGAGCCCTTTTAGTCGATGGACTT
GGAGATGGTTTGCTGTTAGAAGCCCCAGGACAAGATTTTGATTTTCTGAG
GGACACATCTTTCAACTTACTACAAGGTTGCAGAATGAGGAATACAAAGA
CGGAGTATGTCTCATGTCCATCATGTGGTAGAACTTTGTTTGACCTTCAA
GAAATAAGTGCAGAGATACGAGAGAAAACATCGCACTTGCCCGGTGTTTC
GATTGCTATCATGGGTTGCATTGTCAATGGACCTGGAGAGATGGCTGATG
CAGACTTTGGGTATGTTGGTGGGGCTCCTGGAAAGATTGACCTGTATGTC
GGGAAGACTGTGGTGAAGCGTGGTATTGCAATGGAGCANGCAACCGATGC
CTTGATCCAACTAATAAAGGATCACGGGCGCTGGGCGGAGCCTCCCGCAG
AAGAGTANGATATGGTAATTTCCATCAACAGATATACAATAAAGACTCAG
TTGAAAGGAGACCACCATACCCCAGCTGNTGTATATTAAATTCACATGGC
ACAAAGACTACACAGTAATAGCAGATCATATAAATTTTTCCGTCAGATGG
AGCATCTATAGTTCACCAAGGAAAGCGTTATATGTTCCCTCAGTGTATGC
AGATAAAGCTGTTACCACTCCATTAGTAACAGGCCCAATGTTTCTAACTT
TNGTTTCCTTACCAAACCAATAATAATGGATTCCTATGGGATTTATAGCT
CTAGGGAACCACCTGAATATGGCTGGGGGGTTCC
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