EY693254

Overview
NameEY693254
Unique NameEY693254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_RAT (Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 110/231 (47.62%), Postives = 138/231 (59.74%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLVD 875
            ++ F++ L QL V++ K                        PE +NSPY  + FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKITF ESK+L+ G++ +  DT   R+G+GICYD+RF EL  IY  R   L+ YPG   MTTGP HWE+LQRA      V   T SPA DE+ + +  GHST+VD
Sbjct:    1 MSTFRLALIQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPYGTNYFPEYAEKIPG-----ESTKKLSEVAKENSIYLIGGSIPEEDDGKLYNTCAVFGPDGNLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRFAELAQIYARRGCQLLVYPGAFNMTTGPAHWELLQRARAVDNQVYVATASPARDEKASYVAWGHSTVVD 226          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_BOVIN (Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.024e-49
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLVD 875
            +A F++ L QL V++ K                        PE +NSPY    FP YAE I   GD   ST  LSEVA+   + ++GGSIPE+   +LYNTC VFG DG L+ KHRK+HLFDID+PGKITF ES++L+ G++ ++ DT   R+G+GICYDIRF EL  IY  R   L+ YPG   +TTGP HWE+LQR       V   T SPA DE+ + +  GHST+V+
Sbjct:    1 MATFRLALIQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTKYFPDYAEKIP--GD---STQKLSEVAKECSMYVIGGSIPEKDAGKLYNTCAVFGPDGTLLVKHRKLHLFDIDVPGKITFQESETLSPGDSFSLFDTPYCRVGLGICYDIRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRGRAVDNQVYVATASPARDEKASYVAWGHSTVVN 226          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_MOUSE (Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.280e-49
Identity = 107/231 (46.32%), Postives = 137/231 (59.31%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLVD 875
            ++ F++ L QL V++ K                        PE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKITF ESK+L+ G++ +  DT   ++G+GICYD+RF EL  IY  R   L+ YPG   +TTGP HWE+LQRA      V   T SPA D++ + +  GHST+VD
Sbjct:    1 MSTFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPG-----ESTQKLSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVD 226          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2A_XENLA (Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.635e-49
Identity = 107/230 (46.52%), Postives = 136/230 (59.13%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLV 872
            +AKFK+ L Q  V+  K                        PE +NSPY    FP YAE I        ST +LS+VA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ DT   ++G+GICYDIRF EL  IY  +   L+ YPG   MTTGP HWE+LQRA      V   T SPA DE+ + +  GHST+V
Sbjct:    1 MAKFKLSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPYGTTYFPEYAEKIPG-----ESTELLSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDIRFAELAQIYANKGCQLLVYPGAFNMTTGPAHWELLQRARALDNQVYVATASPARDEKASYVAWGHSTIV 225          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_HUMAN (Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.132e-48
Identity = 105/231 (45.45%), Postives = 137/231 (59.31%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLVD 875
            +  F++ L QL +++ K                        PE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+AK+RKIHLFDID+PGKITF ESK+L+ G++ +  DT   R+G+GICYD+RF EL  IY  R   L+ YPG   +TTGP HWE+LQR+      V   T SPA D++ + +  GHST+V+
Sbjct:    1 MTSFRLALIQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAKYFPEYAEKIPG-----ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRSRAVDNQVYVATASPARDDKASYVAWGHSTVVN 226          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_XENTR (Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.617e-48
Identity = 104/230 (45.22%), Postives = 135/230 (58.70%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLV 872
            +AKF++ L Q  V+  K                        PE +NSPY    FP YAE I        ST  LS+VA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ +T   ++G+GICYDIRF EL  +Y  +   L+ YPG   MTTGP HWE+LQRA      V   T SPA DE+ + +  GHST+V
Sbjct:    1 MAKFRLSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPYGTKYFPEYAEKIPG-----ESTERLSQVAKECGIYLIGGSIPEEDSGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFETPYCKVGVGICYDIRFAELAQLYSKKGCQLLVYPGAFNMTTGPAHWELLQRARALDNQVYVATASPARDEKASYVAWGHSTIV 225          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2B_XENLA (Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.617e-48
Identity = 104/230 (45.22%), Postives = 135/230 (58.70%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLV 872
            +AKF++ L Q  V+  K                        PE +NSPY    FP YAE I        ST +LS+VA+   I ++GGSIPE    + YNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ DT   ++G+GICYD+RF EL  IY  +   L+ YPG   MTTGP HWE+LQRA      V   T SPA DE+ + +  GHST+V
Sbjct:    1 MAKFRLSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPYGTKYFPEYAEKIPG-----ESTELLSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDMRFAELAQIYANKGCQLLVYPGAFNMTTGPAHWELLQRARALDNQVYVATASPARDEKASYVAWGHSTVV 225          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_PONAB (Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.210e-47
Identity = 105/231 (45.45%), Postives = 135/231 (58.44%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLVD 875
            +A F++ L QL +++                          PE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+AK+RKIHLFDID+PGKITF ESK+L+ G++    DT   R+G+GICYD+RF EL  IY  R   L+ YPG   +TTGP HWE+LQR       V   T SPA D++ + +  GHST+V+
Sbjct:    1 MASFRLALIQLQISSINSDNVTRACSFIREAATQGAKIVSLPECFNSPYGTKYFPEYAEKIPG-----ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDSFCTFDT-YCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRGRAVDNQVYVATASPARDDKASYVAWGHSTVVN 225          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: YAUB_SCHPO (UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces pombe GN=SPAC26A3.11 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.967e-46
Identity = 104/228 (45.61%), Postives = 131/228 (57.46%), Query Frame = 3
Query:  198 FKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELAM-CLGHSTLVD 875
            F++GL QL+ T DK                        PEI+NSPY    F  YAE I+   ++SPS   LS +A+  K  + GGSIPER   +LYNT  VF   GKLIA HRKIHLFDIDIPG ++F ES SL+ G+  T+VDT+ G+ G+GICYDIRF EL MI       ++ YPG   ++TGP HWE+L RA      +    C+PA D        GHST+VD
Sbjct:   44 FRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFNQYAEPIE---ESSPSYQALSSMAKDTKTYLFGGSIPERKDGKLYNTAMVFDPSGKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGDAMTMVDTEYGKFGLGICYDIRFPELAMIAARNGCSVMIYPGAFNLSTGPLHWELLARARAVDNEMFVACCAPARDMNADYHSWGHSTVVD 268          
BLAST of EY693254 vs. ExPASy Swiss-Prot
Match: NIT2_DANRE (Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.967e-46
Identity = 101/231 (43.72%), Postives = 134/231 (58.01%), Query Frame = 3
Query:  189 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELGMIYGARSAHLICYPGGIYMTTGPWHWEVLQRA-GHK*SVVRGTCSPAXDEELA-MCLGHSTLVD 875
            ++KF++ + QL V+  K                        PE +NSPY    F  YAE I        ST +LSE A+   I +VGGSIPE  G +LYNTC VFG DG L+  HRKIHLFDID+PGKI F ES++L+ G++ ++ +T   ++G+GICYDIRF EL  IY  +   L+ YPG   MTTGP HWE+LQR       V   T SPA DE  + +  GHS++++
Sbjct:    1 MSKFRLAVVQLHVSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNSPYGTGFFKEYAEKIPG-----ESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLFDIDVPGKIRFQESETLSPGKSLSMFETPYCKVGVGICYDIRFAELAQIYAKKGCQLLVYPGAFNMTTGPAHWELLQRGRAVDNQVYVATASPARDETASYVAWGHSSVIN 226          
The following BLAST results are available for this feature:
BLAST of EY693254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NIT2_RAT1.209e-5047.62Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE... [more]
NIT2_BOVIN1.024e-4946.75Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1[more]
NIT2_MOUSE2.280e-4946.32Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV... [more]
NIT2A_XENLA6.635e-4946.52Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE... [more]
NIT2_HUMAN1.132e-4845.45Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV... [more]
NIT2_XENTR5.617e-4845.22Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 P... [more]
NIT2B_XENLA5.617e-4845.22Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE... [more]
NIT2_PONAB6.210e-4745.45Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV... [more]
YAUB_SCHPO8.967e-4645.61UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces ... [more]
NIT2_DANRE8.967e-4643.72Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693254 ID=EY693254; Name=EY693254; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGCACTTGTACTCCCCTCTCTCTCGTTCCATATTTCTCGGA
AAGGCTAAACCCGTCTTCCAATCTCCTCCTCTCATCCGCACACACTCGTC
AAATCCAAATCCAAATCCAATCATGGCTTCCTCTTCCAAGCCCGAACAAG
CCAGGGCCCCACCCGCCCTTCCCTTGCCCACTCCCCCCGTCGCCAAGTTT
AAGGTTGGGCTTTGCCAATTGTCAGTAACGGCTGACAAAGAAAGGAACAT
CGCTCATGCTCGTAGAGCCATTGAGGAGGCCGCTGAGAAAGGCGCCAAGC
TCATTCTTTTGCCTGAGATTTGGAACAGTCCCTATTCGCATGACAGCTTC
CCAGTTTATGCCGAAGACATTGATGCTGGCGGTGATGCATCTCCTTCCAC
CGCCATGCTTTCTGAAGTTGCTCGTCTTCTGAAGATCACTATAGTTGGCG
GCTCTATTCCCGAACGTTCTGGGGATCGATTGTACAATACTTGCTGCGTC
TTTGGTTCGGATGGGAAACTGATAGCTAAGCACCGGAAGATACACCTTTT
TGATATTGACATTCCCGGGAAGATTACCTTTATAGAATCAAAGTCTCTTA
CAGCAGGGGAGACACCAACCATTGTGGACACAGATGTTGGGCGTATTGGA
ATAGGTATTTGTTATGATATTCGGTTTCAGGAACTGGGCATGATATATGG
AGCAAGAAGTGCTCACTTGATATGCTATCCTGGGGGCATTTACATGACTA
CTGGGCCATGGCATTGGGAAGTATTGCAGAGGGCAGGGCACAAATAATCA
GTTGTACGTGGCACTTGTTCGCCTGCTCNAGATGAAGAACTGGCTATGTG
CCTGGGGCACTCTACTCTGGTAGACCTTTG
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