EY693253

Overview
NameEY693253
Unique NameEY693253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693253 vs. ExPASy Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16
Identity = 64/155 (41.29%), Postives = 79/155 (50.97%), Query Frame = 1 
Query:  184 PSAGQRRPDQLQIQGPRPPPLSIHRDSHXXXXXXXXXXXXTEQ-QPHHHSERQQPVIIYSISPKVINVTVADFMTTVQRLT----GAXXXXXXXXXXXPAARIAVVEKVMDSPREKASSAAVINNDYVVEETEDQGRGEGAEFEVGRVPGILSPS 633
            PS  Q +  QLQI GPRP PLS+H+DSH              + QP  +  R+ PV+IY++SPKV++ T ++FM  VQRLT    G            PAAR+A  E    SPR     AA    D  VE   +    E AEF  G  PGILSPS
Sbjct:   12 PSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPRE-PVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTENA--SPRGGKEPAA---RDETVE--INTAMEEAAEFG-GYAPGILSPS 157
The following BLAST results are available for this feature:
BLAST of EY693253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MKS1_ARATH7.530e-1641.29Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693253 ID=EY693253; Name=EY693253; organism=Citrus sinensis; type=EST; length=887bp
CCCACGCGTCCGGAAAATATCTCTTTCGTTAAACCATTCATTTCTGGAGC
GGTAGAGATTTTTTTTTTTTCCCCATCTTAGCTCTCTCTCAAGTCTCAAA
TCTCAATCATTTTTCATCTGTAAAATCACACCCCTGCACTTTTATATTTT
CTCGATTTTGACCATATGGACTCGTCAAACTTGCCCAGCGCGGGCCAGAG
GAGACCGGATCAGCTGCAAATCCAAGGCCCCCGCCCTCCGCCGCTAAGCA
TCCACAGAGACTCCCACAAGATCAAGAAACCACCAAAGCCACCGCTGCCG
CCGACGGAGCAGCAACCCCACCACCACAGCGAACGACAGCAGCCGGTGAT
CATCTACTCCATCTCTCCCAAAGTCATCAACGTCACAGTCGCCGACTTCA
TGACCACTGTCCAGCGCCTGACCGGTGCCTCTTCTTCTTCTTCCGGCGAC
GGAGACGTTTCTCCAGCTGCGAGAATAGCGGTGGTGGAGAAAGTCATGGA
CAGTCCCAGGGAGAAGGCCAGTTCCGCTGCTGTAATAAATAATGATTACG
TGGTGGAAGAAACAGAAGATCAAGGAAGAGGAGAAGGGGCTGAATTTGAA
GTGGGTCGAGTTCCGGGGATACTGTCCCCGTCGACGTTGCCGCCGCTGGT
TCAAGAATGTACTTCTCTCCAACGCGGCGTCGGCATCGGCGGGGGCTGAC
CCATTTGGGTTATCTACGCATGGGGAATATGGGTNNNCTGATACAGTCCA
TCTTCTTCGGGGNTNGTCTCATCAGGTTTTTTGGGGTCTCTGTTTTATCT
CCTGATTTTTTTGGNCAATTTGGAATTTTAGTAATTCAGTCCTTCAGTAC
CATTAACATTCATGTATCTGCAATCATGCCGTTGTGA
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