EY693158

Overview
NameEY693158
Unique NameEY693158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.936e-28
Identity = 73/153 (47.71%), Postives = 94/153 (61.44%), Query Frame = 2
Query:  221 ANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            + HATYVPHTAG YSV  FR  +CPIV+RLTNSLMMH +N+ +K MAV I+K AM II L+TDQNPIQ+  DA++N  PREDATRI SA      +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   36 SKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKDE 188          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.936e-28
Identity = 74/156 (47.44%), Postives = 96/156 (61.54%), Query Frame = 2
Query:  212 MQAANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            +QAA HAT+VPHTAG YSV  FR  +CPIV+RLTNSLMMH +N+ +K MAV IVK AM II L++D NPIQ+  DA++N  PREDATRI SA      +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   43 VQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.332e-27
Identity = 72/156 (46.15%), Postives = 95/156 (60.90%), Query Frame = 2
Query:  212 MQAANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            +Q + HAT+VPHTAG YSV  FR  +CPIV+RLTNSLMMH +N+ +K MAV IVK AM II L++D NPIQ+  DA++N  PREDATRI SA      +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   43 VQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.974e-25
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 2
Query:  236 YVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            Y+PH+AG Y+   FR   CPI++RLTNSLMMH +N+ +K MAV IV  A  II L+TDQNPIQI  DA++N  PRED+TRI SA +    +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   57 YLPHSAGRYAAKRFRKANCPIIERLTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAKGSSNSYAIKKKDE 204          

HSP 2 Score: 29.6462 bits (65), Expect = 1.974e-25
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 1
Query:  142 KLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237
            KL N+W++ DV + DIS  +YI   S  P YL
Sbjct:   29 KLFNRWSYEDVEIRDISLTDYIQIRS--PVYL 58          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 3.348e-25
Identity = 60/151 (39.74%), Postives = 89/151 (58.94%), Query Frame = 2
Query:  227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            +A Y+PH+AG Y+   FR  +CPIV+RLTNS+MMH +N+ +K M V IVK A  II L+T +NP+Q+  +A+IN  PRED+TRI  A +    +    P+  V  +      G+        ++    L   L+ A + SSNSY++  +DE
Sbjct:   45 YAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKKDE 195          

HSP 2 Score: 33.113 bits (74), Expect = 3.348e-25
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 1
Query:  142 KLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237
            KL  KW+  DV +NDIS ++YIA      +YL
Sbjct:   18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 5.671e-25
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            +A Y+PH+AG Y+   FR  +CPIV+RLTNS+MMH +N+ +K M V IVK A  II L+T +NP+Q+  +A+IN  PRED+TRI  A +    +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   45 YAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 195          

HSP 2 Score: 33.4982 bits (75), Expect = 5.671e-25
Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1
Query:   97 KWHDLKNHPSLTTMCKLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237
            +W       + T   KL  KW+  DV +NDIS ++YIA      +YL
Sbjct:    3 EWETAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 5.671e-25
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            +A Y+PH+AG Y+   FR  +CPIV+RLTNS+MMH +N+ +K M V IVK A  II L+T +NP+Q+  +A+IN  PRED+TRI  A +    +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   45 YAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 195          

HSP 2 Score: 33.4982 bits (75), Expect = 5.671e-25
Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1
Query:   97 KWHDLKNHPSLTTMCKLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237
            +W       + T   KL  KW+  DV +NDIS ++YIA      +YL
Sbjct:    3 EWETAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 7.381e-25
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            +A Y+PH+AG Y+   FR  +CPIV+RLTNS+MMH +N+ +K M V IVK A  II L+T +NP+Q+  +A+IN  PRED+TRI  A +    +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   45 YAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDE 195          

HSP 2 Score: 33.4982 bits (75), Expect = 7.381e-25
Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1
Query:   97 KWHDLKNHPSLTTMCKLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237
            +W       + T   KL  KW+  DV +NDIS ++YIA      +YL
Sbjct:    3 EWETATPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.101e-22
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  230 ATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            A Y+PH+AG + V  FR   CPIV+RL NSLMMH +N+ +K M V IVK A  II L+T +NP+Q+  +A+IN  PRED+TRI  A +    +    P+  V  +      G+        +     L   L+ A + SSNSY++  +DE
Sbjct:   52 AKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDE 201          

HSP 2 Score: 25.409 bits (54), Expect = 4.101e-22
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 1
Query:  145 LVNKWTF*DVHVNDISCENYIAHASGQPRYL 237
            L  KW+   V+V+DIS  +YI       +YL
Sbjct:   25 LFGKWSLQSVNVSDISLVDYIPVKEKSAKYL 55          
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.215e-22
Identity = 65/176 (36.93%), Postives = 98/176 (55.68%), Query Frame = 2
Query:  152 ISGLSRMCMSMTSPVRIILLMQAANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679
            + GL+   +S+T  + +       NHA Y+PHTA  Y+V  FR  +CPIV+RLTNSLMMH +N+ +K MAV IV+ +  I+ L+T +NP+Q+  +A+ N  PRED+TRI  A +    +    P+  V  +      G+        +     L   L+ A   SSNSY++  +DE
Sbjct:   31 LEGLNISDISLTDYIAV-----KDNHAVYLPHTAARYAVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHSFEIMHLLTGENPLQLVCEAISNSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREASFRNIKSIAECLADELINAARGSSNSYAIKKKDE 201          
The following BLAST results are available for this feature:
BLAST of EY693158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
RS5_CICAR3.936e-2847.7140S ribosomal protein S5 (Fragment) OS=Cicer ariet... [more]
RS52_ARATH3.936e-2847.4440S ribosomal protein S5-2 OS=Arabidopsis thaliana... [more]
RS51_ARATH3.332e-2746.1540S ribosomal protein S5-1 OS=Arabidopsis thaliana... [more]
RS5_NEUCR1.974e-2543.2440S ribosomal protein S5 OS=Neurospora crassa GN=r... [more]
RS5_MOUSE3.348e-2539.7440S ribosomal protein S5 OS=Mus musculus GN=Rps5 P... [more]
RS5_HUMAN5.671e-2539.7440S ribosomal protein S5 OS=Homo sapiens GN=RPS5 P... [more]
RS5_BOVIN5.671e-2539.7440S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=... [more]
RS5_RAT7.381e-2539.7440S ribosomal protein S5 OS=Rattus norvegicus GN=R... [more]
RS5_CAEEL4.101e-2240.0040S ribosomal protein S5 OS=Caenorhabditis elegans... [more]
RS5_PODCA4.215e-2236.9340S ribosomal protein S5 OS=Podocoryne carnea GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693158 ID=EY693158; Name=EY693158; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGGCTAGCGGCAGGCTATTCTGTATTACTATATCTCACGGC
GGCTCTCACTCTCTATTACCTCTTACTGAACAATGGCGACTGCCTGAAAT
GGCACGATCTCAAGAACCATCCCAGCCTCACTACGATGTGCAAACTCGTC
AATAAGTGGACTTTCTAGGATGTGCATGTCAATGACATCTCCTGTGAGAA
TTATATTGCTCATGCAAGCGGCCAACCACGCTACTTATGTGCCTCACACT
GCTGGGACGTACTCAGTTACGATTTTCCGGAATGTCCGGTGTCCCATTGT
CCAAAGGCTTACAAACTCTCTCATGATGCACCGGCAAAACGACTACCAGA
AATCGATGGCCGTCGGGATAGTTAAACTTGCCATGCACATCATTCTCCTT
GTGACCGACCAGAACCCAATTCAAATCTTTGACGATGCTCTCATCAACCG
GGATCCACGGGAAGATGCTACCCGTATACTATCTGCTGCTAGTGGATAGC
ATTAGAGCTGCGGACATGTCCCCATATGCCTCGTGAGATCAAGCGATCTA
ACATATCACCACGGGAGCTCGGGGATCTGATTATCTGTACATCAACACAA
TTGCCGAATGCTTGTCCCATGACTCATGACCGCTACCGAGCGTTCATCTA
ACAGCTACTCGATGNATAATAGAGATGAGACCCACATACTGGTAATGTCC
ATCACTGTGGTCTGGAAAGTGATGATCGGATGACAAAGTTTACTGTCTTA
CAAACAAACTTTCGACTATGTTGAGCGCTCTTTGCAAATGACACCGGGGC
CCCCAATTGGATGACTGGTTGAAGAGCATCAAGGGCTACTGGTCCTTTCC
CCCGGGGGAGGAACGAGGCACCGGCCCCTATTCACTAAAGTTTATGGT
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