EY693158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.936e-28 Identity = 73/153 (47.71%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 221 ANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 + HATYVPHTAG YSV FR +CPIV+RLTNSLMMH +N+ +K MAV I+K AM II L+TDQNPIQ+ DA++N PREDATRI SA + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 36 SKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKDE 188
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 3.936e-28 Identity = 74/156 (47.44%), Postives = 96/156 (61.54%), Query Frame = 2 Query: 212 MQAANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 +QAA HAT+VPHTAG YSV FR +CPIV+RLTNSLMMH +N+ +K MAV IVK AM II L++D NPIQ+ DA++N PREDATRI SA + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 43 VQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.332e-27 Identity = 72/156 (46.15%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 212 MQAANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 +Q + HAT+VPHTAG YSV FR +CPIV+RLTNSLMMH +N+ +K MAV IVK AM II L++D NPIQ+ DA++N PREDATRI SA + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 43 VQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.974e-25 Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 236 YVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 Y+PH+AG Y+ FR CPI++RLTNSLMMH +N+ +K MAV IV A II L+TDQNPIQI DA++N PRED+TRI SA + + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 57 YLPHSAGRYAAKRFRKANCPIIERLTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAKGSSNSYAIKKKDE 204 HSP 2 Score: 29.6462 bits (65), Expect = 1.974e-25 Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 1 Query: 142 KLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237 KL N+W++ DV + DIS +YI S P YL Sbjct: 29 KLFNRWSYEDVEIRDISLTDYIQIRS--PVYL 58
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 3.348e-25 Identity = 60/151 (39.74%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 +A Y+PH+AG Y+ FR +CPIV+RLTNS+MMH +N+ +K M V IVK A II L+T +NP+Q+ +A+IN PRED+TRI A + + P+ V + G+ ++ L L+ A + SSNSY++ +DE Sbjct: 45 YAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKKDE 195 HSP 2 Score: 33.113 bits (74), Expect = 3.348e-25 Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 1 Query: 142 KLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237 KL KW+ DV +NDIS ++YIA +YL Sbjct: 18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4) HSP 1 Score: 102.449 bits (254), Expect = 5.671e-25 Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 +A Y+PH+AG Y+ FR +CPIV+RLTNS+MMH +N+ +K M V IVK A II L+T +NP+Q+ +A+IN PRED+TRI A + + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 45 YAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 195 HSP 2 Score: 33.4982 bits (75), Expect = 5.671e-25 Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1 Query: 97 KWHDLKNHPSLTTMCKLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237 +W + T KL KW+ DV +NDIS ++YIA +YL Sbjct: 3 EWETAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 5.671e-25 Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 +A Y+PH+AG Y+ FR +CPIV+RLTNS+MMH +N+ +K M V IVK A II L+T +NP+Q+ +A+IN PRED+TRI A + + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 45 YAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 195 HSP 2 Score: 33.4982 bits (75), Expect = 5.671e-25 Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1 Query: 97 KWHDLKNHPSLTTMCKLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237 +W + T KL KW+ DV +NDIS ++YIA +YL Sbjct: 3 EWETAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 7.381e-25 Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 227 HATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 +A Y+PH+AG Y+ FR +CPIV+RLTNS+MMH +N+ +K M V IVK A II L+T +NP+Q+ +A+IN PRED+TRI A + + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 45 YAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDE 195 HSP 2 Score: 33.4982 bits (75), Expect = 7.381e-25 Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1 Query: 97 KWHDLKNHPSLTTMCKLVNKWTF*DVHVNDISCENYIAHASGQPRYL 237 +W + T KL KW+ DV +NDIS ++YIA +YL Sbjct: 3 EWETATPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.101e-22 Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 230 ATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 A Y+PH+AG + V FR CPIV+RL NSLMMH +N+ +K M V IVK A II L+T +NP+Q+ +A+IN PRED+TRI A + + P+ V + G+ + L L+ A + SSNSY++ +DE Sbjct: 52 AKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDE 201 HSP 2 Score: 25.409 bits (54), Expect = 4.101e-22 Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 1 Query: 145 LVNKWTF*DVHVNDISCENYIAHASGQPRYL 237 L KW+ V+V+DIS +YI +YL Sbjct: 25 LFGKWSLQSVNVSDISLVDYIPVKEKSAKYL 55
BLAST of EY693158 vs. ExPASy Swiss-Prot
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.215e-22 Identity = 65/176 (36.93%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 152 ISGLSRMCMSMTSPVRIILLMQAANHATYVPHTAGTYSVTIFRNVRCPIVQRLTNSLMMHRQNDYQKSMAVGIVKLAMHIILLVTDQNPIQIFDDALINRDPREDATRILSAASG*H*SCGHVPICLVRSSDLTYHHGSSGI*LSVHQHNCRMLVP*LMTATERSSNSYSMXNRDE 679 + GL+ +S+T + + NHA Y+PHTA Y+V FR +CPIV+RLTNSLMMH +N+ +K MAV IV+ + I+ L+T +NP+Q+ +A+ N PRED+TRI A + + P+ V + G+ + L L+ A SSNSY++ +DE Sbjct: 31 LEGLNISDISLTDYIAV-----KDNHAVYLPHTAARYAVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHSFEIMHLLTGENPLQLVCEAISNSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREASFRNIKSIAECLADELINAARGSSNSYAIKKKDE 201 The following BLAST results are available for this feature:
BLAST of EY693158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693158 ID=EY693158; Name=EY693158; organism=Citrus sinensis; type=EST; length=898bpback to top |