EY693154

Overview
NameEY693154
Unique NameEY693154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693154 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.048e-76
Identity = 154/280 (55.00%), Postives = 190/280 (67.86%), Query Frame = 1 
Query:   13 KQRTWPDRSTGSRFTALQFPITEKDNRRPELTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDVLNKIAASFTLPQLRVASLVCKSWNDALRPLREAMVLVRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDXKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPSNAEEAVKWLYQASIAGHVRTQYQLALCLHRRKGVDFHLQEAARWXLKSC*KGLWAGYVHTSLCYSLGEGCP*VPN-XEEWMKRPAVWGPAK 834
            KQRTWP RS GSRF++L F      ++R  ++              S S S  S     E  DF+ LP+D+L KIAA F+ P L+ ASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE   KE A++LYR+A+ LGD  GQ NLGI+YLQ QPSN +EA+KWL Q++  G+VR QYQLALCLH  + V  +L EA +W LK+   G      + SLCYS+GEG P       +WMKR A  G +K
Sbjct:    2 KQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSK 281
The following BLAST results are available for this feature:
BLAST of EY693154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB84_ARATH2.048e-7655.00F-box protein At1g70590 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-E02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693154 ID=EY693154; Name=EY693154; organism=Citrus sinensis; type=EST; length=838bp
CCACGCGTCCGGAAGCAAAGAACATGGCCGGATCGATCGACCGGCTCTCG
GTTCACAGCTCTTCAATTTCCGATAACCGAGAAGGATAACCGCCGACCAG
AACTCACTGCCAGTGCACGGAAGGCTAGAATCAAACGGCGCAGCCGCTTC
AGCTGCTCACGATCAATAAAATCAACGGAGGGTCATGATTTCGCGAGCCT
ACCGTTCGATGTCTTGAACAAAATCGCAGCGTCATTCACGCTGCCTCAAC
TGAGAGTGGCGTCGCTGGTGTGCAAGTCATGGAACGACGCGCTTCGGCCG
TTGAGAGAGGCGATGGTGTTAGTAAGATGGGGGAAACGATTCAAGCACGG
CCGAGGCGTCCGCAAGAACTTGGATAAGGCTCTCGACTCGTTCTTGAAAG
GCGCGGCGCGCGGCTCCACGCTTGCTATGGTTGACGCCGGACTGATGTAT
TGGGAGATGGACNAAAAGGAGGCGGCTATTAGCTTGTATCGGCAAGCCGC
TGTGCTTGGAGATCCAGCTGGTCAGTTCAATTTGGGAATTTCTTATTTGC
AAGCGCAACCTTCAAATGCAGAGGAAGCTGTGAAGTGGTTGTATCAAGCA
TCGATTGCTGGCCATGTTCGAACTCAGTATCAACTTGCACTTTGCCTGCA
TAGAAGGAAAGGAGTGGATTTCCATCTTCAAGAGGCTGCTAGGTGGTNAT
TAAAGAGCTGCTGAAAGGGGCTATGGGCGGGCTATGTACACACCTCTCTT
TGCTATTCCTTGGGGGAAGGTTGCCCCTGAGTCCCNAACANCGAGGAATG
GATGAAAAGACCAGCTGTTTGGGGTCCGGCNAAACCTC
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