EY693149 | Citrus Genome Database

Overview


Name	EY693149
Unique Name	EY693149
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	910

Libraries


Library Name	Type
Sweet orange fruit, development stadium (1 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.409e-51
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW+I SQRLLTLTGVYG WKHVSNLDR +SRRYLEM+YAL++RKLAES PLA
Sbjct:  751 YTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLA 803

HSP 2 Score: 90.8929 bits (224), Expect = 6.409e-51
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+GKSG+HIDPYHG++AA++LVDFFEKC  DP++WDKIS  GL RIEE
Sbjct:  697 PAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEE 749

HSP 3 Score: 57.7658 bits (138), Expect = 6.409e-51
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            T+GA VQPA+ E FGLTV +AMT GLPTFATC GGP
Sbjct:  662 TRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGP 697

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.233e-47
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+GKSG+HIDPYHGEQ AE+LV+FFEKC  DPS WD IS GGL RI+E
Sbjct:  699 PAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQE 751

HSP 2 Score: 86.6557 bits (213), Expect = 2.233e-47
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLAE 441
            YTW+I S+RLLTL GVYG WKHVS LDR + RRYLEM+YAL++RKLAES PLA+
Sbjct:  753 YTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAK 806

HSP 3 Score: 54.299 bits (129), Expect = 2.233e-47
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            TKGA VQPA  E FGLTV +AMT GLPTFAT  GGP
Sbjct:  664 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGP 699

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.075e-44
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+G SG HIDPYH ++AA+ILV+FFEK  ADPSYWDKIS GGL RI E
Sbjct:  693 PAEIIVDGVSGLHIDPYHSDKAADILVNFFEKSTADPSYWDKISQGGLKRIYE 745

HSP 2 Score: 81.6481 bits (200), Expect = 2.075e-44
Identity = 35/53 (66.04%), Postives = 47/53 (88.68%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW++ S+RL+TLTGVYG WK+VSNL+R ++RRYLEM+YAL++R LA + PLA
Sbjct:  747 YTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLA 799

HSP 3 Score: 55.8398 bits (133), Expect = 2.075e-44
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            TKGA VQPA  E FGLTV +AMT GLPT ATC GGP
Sbjct:  658 TKGAFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGP 693

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.004e-43
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+G SG HIDPYH ++AA+ILV+FF+KC ADPSYWD+IS GGL RI E
Sbjct:  694 PAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKADPSYWDEISQGGLQRIYE 746

HSP 2 Score: 79.7221 bits (195), Expect = 1.004e-43
Identity = 33/53 (62.26%), Postives = 46/53 (86.79%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW++ S+RL+TLTGVYG WK+VSNL+R ++RRY+EM+YAL++R LA   PL+
Sbjct:  748 YTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLS 800

HSP 3 Score: 54.6842 bits (130), Expect = 1.004e-43
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            TKGA VQPA  E FGLTV ++MT GLPT ATC GGP
Sbjct:  659 TKGAFVQPAFYEAFGLTVIESMTCGLPTIATCHGGP 694

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.305e-43
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+G SG+HIDPYHGE+AAE++V+FFE+C  +PS+W+ IS GGL RI+E
Sbjct:  693 PAEIIVHGTSGFHIDPYHGEKAAELIVNFFERCKTEPSHWETISAGGLKRIQE 745

HSP 2 Score: 80.1073 bits (196), Expect = 1.305e-43
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW+I S+RLLTL GVYG WKHVS LDR + RRYLEM+ AL++R LAES PLA
Sbjct:  747 YTWQIYSERLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLA 799

HSP 3 Score: 54.299 bits (129), Expect = 1.305e-43
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            TKGA VQPA  E FGLTV +AMT GLPTFAT  GGP
Sbjct:  658 TKGAFVQPAFYEAFGLTVIEAMTCGLPTFATIHGGP 693

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.697e-43
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+G SGYHIDPY G++A+ +LVDFF+KC A+PS+W KIS GGL RIEE
Sbjct:  702 PAEIIVHGVSGYHIDPYQGDKASALLVDFFDKCQAEPSHWSKISQGGLQRIEE 754

HSP 2 Score: 79.337 bits (194), Expect = 1.697e-43
Identity = 34/53 (64.15%), Postives = 46/53 (86.79%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW++ S+RL+TLTGVYG WK+VSNL+R ++RRYLEM YAL++R +A + PLA
Sbjct:  756 YTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLA 808

HSP 3 Score: 54.299 bits (129), Expect = 1.697e-43
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            TKGA VQPA  E FGLTV +AMT GLPTFAT  GGP
Sbjct:  667 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATAYGGP 702

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.732e-43
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+GKSG+ IDPYHGEQAA++L DFFEKC  DPS+W+ IS GGL RI+E
Sbjct:  697 PAEIIVHGKSGFQIDPYHGEQAADLLADFFEKCKVDPSHWEAISEGGLKRIQE 749

HSP 2 Score: 78.5666 bits (192), Expect = 3.732e-43
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW+I S RLLTL  VYG WKHVS LDR + RRYLEM+YAL+ RKLA+  PLA
Sbjct:  751 YTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLA 803

HSP 3 Score: 51.6026 bits (122), Expect = 3.732e-43
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            T+GA VQPA  E FGLTV +AM+ GLPTFAT +GGP
Sbjct:  662 TRGAFVQPAFYEAFGLTVVEAMSCGLPTFATNQGGP 697

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.309e-43
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIVNG SG+HIDPY G++A+ +LV+FFEKC  DPS+W KIS GGL RIEE
Sbjct:  702 PAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEE 754

HSP 2 Score: 79.337 bits (194), Expect = 6.309e-43
Identity = 34/53 (64.15%), Postives = 46/53 (86.79%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW++ S+RL+TLTGVYG WK+VSNL+R ++RRYLEM YAL++R +A + PLA
Sbjct:  756 YTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLA 808

HSP 3 Score: 53.1434 bits (126), Expect = 6.309e-43
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 1

Query:   13 TKGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            TKGA VQPA  E FGLTV ++MT GLPTFAT  GGP
Sbjct:  667 TKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGP 702

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.965e-42
Identity = 35/53 (66.04%), Postives = 47/53 (88.68%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW++ S+RL+TL+GVYG WK+VSNLDR ++RRYLEM YAL++RK+A + PLA
Sbjct:  756 YTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLA 808

HSP 2 Score: 80.4925 bits (197), Expect = 3.965e-42
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIVNG SGYHIDPY  ++A+ +LV FF KC  DPS+W+KIS GGL RIEE
Sbjct:  702 PAEIIVNGVSGYHIDPYQNDKASALLVGFFGKCQEDPSHWNKISQGGLQRIEE 754

HSP 3 Score: 52.373 bits (124), Expect = 3.965e-42
Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = 1

Query:   16 KGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            KGA VQPA  E FGLTV +AMT GLPTFAT  GGP
Sbjct:  668 KGAFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGP 702

[Close]

BLAST of EY693149 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-41
Identity = 34/53 (64.15%), Postives = 47/53 (88.68%), Query Frame = 1

Query:  280 YTWEISSQRLLTLTGVYGVWKHVSNLDRHDSRRYLEMYYALEHRKLAESDPLA 438
            YTW++ S+RL+TL+GVYG WK+V+NLDR ++RRYLEM YAL++RK+A + PLA
Sbjct:  756 YTWKLYSERLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLA 808

HSP 2 Score: 79.7221 bits (195), Expect = 1.133e-41
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 2

Query:  119 PTEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCWADPSYWDKISLGGLNRIEE 277
            P EIIV+G SGYHIDPY  ++A+ +LV+FFEKC  DP++W KIS GGL RIEE
Sbjct:  702 PAEIIVHGVSGYHIDPYQNDKASALLVEFFEKCQEDPNHWIKISQGGLQRIEE 754

HSP 3 Score: 52.7582 bits (125), Expect = 1.133e-41
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 1

Query:   16 KGALVQPALDEDFGLTVDKAMTWGLPTFATCKGGP 120
            +GA VQPAL E FGLTV +AMT GLPTFAT  GGP
Sbjct:  668 RGAFVQPALYEAFGLTVIEAMTCGLPTFATAYGGP 702

The following BLAST results are available for this feature:

BLAST of EY693149 vs. ExPASy Swiss-Prot

BLAST of EY693149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24


Match Name	E-value	Identity	Description
SUSY_SOYBN	6.409e-51	83.02	Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2	[more]
SUS1_DAUCA	2.233e-47	75.47	Sucrose synthase isoform 1 OS=Daucus carota PE=2 S...	[more]
SUS1_HORVU	2.075e-44	73.58	Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ...	[more]
SUS1_MAIZE	1.004e-43	71.70	Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1	[more]
SUS2_DAUCA	1.305e-43	66.04	Sucrose synthase isoform 2 OS=Daucus carota PE=2 S...	[more]
SUS2_MAIZE	1.697e-43	69.81	Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1	[more]
SUS2_SOLTU	3.732e-43	71.70	Sucrose synthase OS=Solanum tuberosum PE=3 SV=1	[more]
SUS1_ORYSJ	6.309e-43	69.81	Sucrose synthase 1 OS=Oryza sativa subsp. japonica...	[more]
SUS2_HORVU	3.965e-42	66.04	Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ...	[more]
SUS3_ORYSJ	1.133e-41	64.15	Sucrose synthase 3 OS=Oryza sativa subsp. japonica...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-700-008-D07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY693149 ID=EY693149; Name=EY693149; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGAACGAAGGGAGCTCTTGTGCAACCTGCACTGGATGAAGA
CTTTGGCTTGACTGTGGATAAGGCCATGACCTGGGGATTGCCGACATTTG
CAACTTGCAAGGGTGGCCCCGACTGAGATTATCGTAAACGGAAAATCTGG
CTACCACATTGATCCTTACCATGGGGAGCAAGCTGCTGAGATCCTTGTTG
ACTTCTTTGAGAAGTGCTGGGCAGATCCCTCATACTGGGACAAGATATCA
CTGGGAGGCCTGAATCGTATTGAAGAGACTATACATGGGAAATTTCCTCT
CAGAGGCTTCTGACCCTGACTGGAGTCTATGGTGTCTGGAAACATGTATC
TAACCTTGATCGGCATGACAGCCGTCGATACCTTGAAATGTATTATGCTC
TCGAGCACCGGAAGCTGGCTGAGTCTGATCCTCTGGCTGAGAAGTACATG
GACATTGAGGAACCTCTCCTGGAGGCTGGTCCGAGTGGAGATTTCTCTAG
AAGAGGTGATAATGTCCCTTCCGGGATTGCGATAGGACATGACTTTTTTA
CCGGGTTAATTTTCCTCTACACTCCTTATACCTGTATGACTGCTCAGATT
GTAGCACTATGGGTGTGCACCCTCATCGATGCAGTATAGTTCGGGAGACA
ATGCAGCTGCTGCCCATTGACTTATGGGATGCCGCTACCAATGAGAAATA
TGCTGTTGTCAAACTCTGATTCCATCCGCAGCCATTCATGGTACACTTCC
CTCAAACCTGATGTATGGACTGTTTTTGAAGCCACTGCCGGGAACTGCAA
GCAAAATATTCACCTGCCCTGGTTCGAGGCCGAATTAAGATCGGATTAAA
AATTCCCATATTCCGCCTCATAAGGCCCAACTTTCCGGCCCAAGGAAGGA
AGAACTAAAT