EY693078

Overview
NameEY693078
Unique NameEY693078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig936 contig Csv1_Contig936:12..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: TCB2_YEAST (Tricalbin-2 OS=Saccharomyces cerevisiae GN=TCB2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 66/257 (25.68%), Postives = 122/257 (47.47%), Query Frame = 1
Query:   58 ISTIFGFCGFGVG-----ISSGLVIGYFLFIYFQPTDVKNPE-IRPLVERDSETLQQMLPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQ--IPKYKIESVEFETLTLGTLPPTFQGMKVYVTDEKE-LIMEPCLKWA---------------ANPNVTIGVKAFGLKATVQVVDL--QVFAQPRITLKPLVPAFPCFANIYVSLMEKPHVDFGLKLVGADLMSF--LVSIGLFRSLSKL 744
            I  I G C F +G     ++S L++     + ++ +  K  E +R L +++ +T++++           DY+ V+WLN FL+  WP ++ ++ +   +     ++E   IPK+ I+++  +  TLG  PP    +K +   + + ++M+ CL +                 N NV +  K FG+   V V D+  QVF + R     L+   P    I + L+E P VDF  +L+G  + ++  L   GL R + K+
Sbjct:  105 ILIIAGLCSFVLGYFKFSLASVLIVMLTTGMLYRTSSKKYRESLRDLAQKE-QTVEKITS---------DYESVEWLNTFLDKYWPIIEPSVSQQIVDGTNTALSENVAIPKF-IKAIWLDQFTLGVKPPRIDAIKTFQNTKSDVVVMDVCLSFTPHDMSDLDAKQCRNYVNSNVVLKAKIFGMDIPVSVADIFFQVFVRFRF---QLMTTLPLVETINIQLLEVPEVDFISRLLGNSVFNWEILAIPGLMRLIQKM 347          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT3_XENTR (Extended synaptotagmin-3 OS=Xenopus tropicalis GN=esyt3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14
Identity = 45/153 (29.41%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  214 LPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKPHVD 666
            L ++P WV  PD +RV+WLNK +  MWPY+   + K  ++  +P++        +++  F  + LG   P   G+K Y    D++E+I++  L +  +  + + VK    KA V+ V  Q+    R+ L PL+P  P    + +  +++PH+D
Sbjct:  144 LQQLPAWVNFPDVERVEWLNKVVGQMWPYIGMYVEKMFQDKVEPLVRSS--SAHLKAFTFTKVHLGEKFPRINGVKSYTKNVDKREVILDLQLSYNGDVEINVEVKKM-CKAGVKGV--QLHGTLRVILAPLLPDLPFVGAVTMFFIQRPHLD 291          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: EST2B_XENLA (Extended synaptotagmin-2-B OS=Xenopus laevis GN=esyt2-B PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 39/148 (26.35%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  220 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKP 657
            ++P WV  PD +R +WLNK ++ MWPY+ + I K  +   +P  A +     + +  F  + +G+ P    G+KVY    D++++I++  + +     + + VK +  +A V+   +Q+    R+ L+PL+   P    + +  + KP
Sbjct:  114 DLPAWVHFPDIERAEWLNKTVKHMWPYICQFIEKLFRETIEP--AVRGANAHLSTFSFTKIDMGSQPLRINGVKVYTENVDKRQIILDLQISFVGETEIDLEVKRYFCRAGVK--SIQLHGTMRVILEPLIGDVPIVGALSIFFLRKP 257          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: EST2A_XENLA (Extended synaptotagmin-2-A OS=Xenopus laevis GN=esyt2-A PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 39/148 (26.35%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  220 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKP 657
            ++P WV  PD +R +WLNK ++ MWPY+ + I K  +   +P  A +     + +  F  + +G+ P    G+KVY    D++++I++  + +     + + VK +  +A V+   +Q+    R+ L+PL+   P    + +  + KP
Sbjct:  110 DLPAWVHFPDIERAEWLNKTVKHMWPYICQFIEKLFRETIEP--AVRGANAHLSTFNFTKIDMGSQPLRINGVKVYTENVDKRQIILDLQISFVGETEIDLEVKRYFCRAGVK--SIQLHGTMRVILEPLIGDVPIVGALSIFFLRKP 253          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT2_HUMAN (Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 38/148 (25.68%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  220 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKP 657
            ++P WV  PD +R +WLNK ++ MWP++ + I K  +   +P  A +     + +  F  + +G  P    G+KVY    D++++I++  + +  N  + + +K +  +A V+   +Q+    R+ L+PL+   P    + +  + KP
Sbjct:  182 DLPAWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEP--AVRGANTHLSTFSFTKVDVGQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRAGVK--SIQIHGTMRVILEPLIGDMPLVGALSIFFLRKP 325          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT1_RAT (Extended synaptotagmin-1 OS=Rattus norvegicus GN=Esyt1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 51/203 (25.12%), Postives = 100/203 (49.26%), Query Frame = 1
Query:  100 SSGLVIGYFLF---IYFQPTDVKNPEIRPL---------VER-DSETLQQMLPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYVTDEK-ELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKPHVD 666
            ++GL +G+ LF   +Y     V++ + R L          ER  +ETL     E+P WV  PD ++ +WLNK +  +WP+L + + K       P +    P   +++  F  + LG  P    G+KV+ +  K +++++  + +  +  + + VK +  KA V+   +Q+    R+ L+PL+   P    + +  +++P +D
Sbjct:   65 AAGLSVGFVLFGLALYLGWRRVRDGKERSLRAARQLLDDEERITAETLYMSHRELPAWVSFPDVEKAEWLNKIVVQVWPFLGQYMEKLLAETVAPAVRGANP--HLQTFTFTRVELGEKPVRIIGVKVHPSQRKDQILLDLNVSYVGDLQIDVEVKKYFCKAGVK--GMQLHGVLRVILEPLIGDLPIVGAVSMFFIKRPTLD 263          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT2_MOUSE (Extended synaptotagmin-2 OS=Mus musculus GN=Esyt2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12
Identity = 38/148 (25.68%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  220 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKP 657
            ++P WV  PD +R +WLNK ++ MWP++ + I K  +   +P  A +     + +  F  + +G  P    G+KVY    D++++I++  + +  N  + + +K +  +A V+   +Q+    R+ L+PL+   P    + +  + KP
Sbjct:  106 DLPAWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEP--AVRGANAHLSTFSFTKVDVGQQPLRVNGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRAGVK--SIQIHGTMRVILEPLIGDMPLVGALSIFFLRKP 249          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT1_PONAB (Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12
Identity = 50/203 (24.63%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   91 VGISSGLVIGYFLFIYFQPTDVKNPEIRPL----------VERDSETLQQMLPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYVTDEKE-LIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKPHVD 666
            VG+S G V+ + L +Y     V++ + R L           +  ++TL     E+P WV  PD ++ +WLNK +  +WP+L + + K       P +    P   +++  F  + LG  P    G+KV+    KE ++++  + +  +  + + VK +  KA V+   +Q+    R+ L+PL+   P    + +  + +P +D
Sbjct:   74 VGLSVGFVL-FGLALYLGWRRVRDEKERSLRAARQLLDDEEQLTAKTLYMSHRELPAWVSFPDVEKAEWLNKIVAQVWPFLGQYMEKLLAETVAPAVRGSNP--HLQTFTFTRVELGEKPLRIIGVKVHPGQRKEQILLDLNISYVGDVQIDVEVKKYFCKAGVK--GMQLHGVLRVILEPLIGDLPIVGAVSMFFIRRPTLD 271          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT1_MOUSE (Extended synaptotagmin-1 OS=Mus musculus GN=Esyt1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12
Identity = 51/203 (25.12%), Postives = 99/203 (48.77%), Query Frame = 1
Query:  100 SSGLVIGYFLF---IYFQPTDVKNPEIRPL---------VER-DSETLQQMLPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYVTDEK-ELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKPHVD 666
            ++GL +G+ LF   +Y     V++ + R L          ER  +ETL     E+P WV  PD ++ +WLNK +  +WP+L + + K       P +    P   +++  F  + LG  P    G+KV+ +  K +++++  + +  +  + + VK +  KA V+   +Q+    R+ L+PL    P    + +  +++P +D
Sbjct:   63 AAGLSVGFVLFGLALYLGWRRVRDGKERSLRAARQLLDDEERITAETLYMSHRELPAWVSFPDVEKAEWLNKIVAQVWPFLGQYMEKLLAETVAPAVRGANP--HLQTFTFTRVELGEKPLRIIGVKVHPSQRKDQILLDLNVSYVGDVQIDVEVKKYFCKAGVK--GMQLHGVLRVILEPLTGDLPIVGAVSMFFIKRPTLD 261          
BLAST of EY693078 vs. ExPASy Swiss-Prot
Match: ESYT1_HUMAN (Extended synaptotagmin-1 OS=Homo sapiens GN=ESYT1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12
Identity = 50/203 (24.63%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   91 VGISSGLVIGYFLFIYFQPTDVKNPEIRPL----------VERDSETLQQMLPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYVTDEKE-LIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFPCFANIYVSLMEKPHVD 666
            VG+S G V+ + L +Y     V++ + R L           +  ++TL     E+P WV  PD ++ +WLNK +  +WP+L + + K       P +    P   +++  F  + LG  P    G+KV+    KE ++++  + +  +  + + VK +  KA V+   +Q+    R+ L+PL+   P    + +  + +P +D
Sbjct:   74 VGLSVGFVL-FGLALYLGWRRVRDEKERSLRAARQLLDDEEQLTAKTLYMSHRELPAWVSFPDVEKAEWLNKIVAQVWPFLGQYMEKLLAETVAPAVRGSNP--HLQTFTFTRVELGEKPLRIIGVKVHPGQRKEQILLDLNISYVGDVQIDVEVKKYFCKAGVK--GMQLHGVLRVILEPLIGDLPFVGAVSMFFIRRPTLD 271          
The following BLAST results are available for this feature:
BLAST of EY693078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TCB2_YEAST2.287e-1425.68Tricalbin-2 OS=Saccharomyces cerevisiae GN=TCB2 PE... [more]
ESYT3_XENTR6.654e-1429.41Extended synaptotagmin-3 OS=Xenopus tropicalis GN=... [more]
EST2B_XENLA2.141e-1226.35Extended synaptotagmin-2-B OS=Xenopus laevis GN=es... [more]
EST2A_XENLA2.141e-1226.35Extended synaptotagmin-2-A OS=Xenopus laevis GN=es... [more]
ESYT2_HUMAN4.769e-1225.68Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 ... [more]
ESYT1_RAT4.769e-1225.12Extended synaptotagmin-1 OS=Rattus norvegicus GN=E... [more]
ESYT2_MOUSE6.228e-1225.68Extended synaptotagmin-2 OS=Mus musculus GN=Esyt2 ... [more]
ESYT1_PONAB6.228e-1224.63Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 ... [more]
ESYT1_MOUSE8.134e-1225.12Extended synaptotagmin-1 OS=Mus musculus GN=Esyt1 ... [more]
ESYT1_HUMAN8.134e-1224.63Extended synaptotagmin-1 OS=Homo sapiens GN=ESYT1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-E08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693078 ID=EY693078; Name=EY693078; organism=Citrus sinensis; type=EST; length=856bp
TACAAAAGGCTGTCTGGATACCGAGAAAATTAACCGAGAAAGTGAGAAAT
GGGAGTTATTAGTACAATCTTCGGTTTTTGTGGATTTGGCGTCGGGATTT
CGTCGGGGCTTGTGATTGGTTACTTCCTTTTCATCTACTTTCAACCAACC
GACGTGAAGAATCCTGAGATTCGCCCGTTGGTTGAGCGAGATTCTGAGAC
TCTGCAGCAGATGCTTCCAGAGATACCTCTTTGGGTGAAATGTCCCGACT
ATGATCGCGTTGATTGGCTGAATAAGTTCCTTGAATTAATGTGGCCTTAT
CTTGACAAGGCTATTTGTAAGACTGCGAAGAATATTGCAAAGCCTATAAT
TGCAGAACAAATTCCTAAGTATAAAATCGAGTCTGTTGAATTTGAAACTC
TTACATTAGGGACTCTACCACCAACTTTTCAAGGTATGAAAGTTTATGTC
ACTGATGAGAAGGAGTTGATTATGGAACCATGCTTAAAGTGGGCTGCAAA
TCCTAATGTAACCATTGGTGTTAAAGCATTTGGTTTGAAGGCAACAGTTC
AGGTGGTGGATTTGCAAGTTTTTGCTCAACCACGCATTACTCTGAAGCCC
TTGGTCCCTGCTTTTCCTTGTTTTGCGAATATTTATGTGTCTCTCATGGA
GAAGCCTCATGTTGACTTTGGACTGAAGCTAGTAGGGGCTGATCTTATGT
CATTCCTGGTCTCTATAGGGTTGTTCAGGAGCTTATCAAAACTCAGGTGG
GCAACATGTACCTGTGGCCCAAACCCTAGAAGTACCATTTTGGATCCATC
AAAGCTTACCGGAGACCTGTGGAAATCTCCCTGGGAAGGTGTGAAGGCAT
GGATCT
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