EY693062

Overview
NameEY693062
Unique NameEY693062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig643 contig Csv1_Contig643:1..888. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 1.118e-86
Identity = 156/245 (63.67%), Postives = 183/245 (74.69%), Query Frame = 3
Query:  165 METQRIIEFPHKNMDKRPRKRPRLTWDXXXXXXXXXXXXA-----LYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLCSGAWQTTIGVCSIYA*ITXYTH*LESRNILPGSAEYXKVPDNSF 884
            +ETQR +EFPH+ +DKRPRKRPRLTWD                  LY   EF +G +PN+   +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+ KE+VAIK++RSINKYREAAMIEIDVLQRL R+D+GG+RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL     +  +   +    +      L+  NIL  S+EY K+PD  F
Sbjct:   17 LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKF 261          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.732e-74
Identity = 140/244 (57.38%), Postives = 174/244 (71.31%), Query Frame = 3
Query:  165 METQRIIEFPHKNMDKRPRKRPRLTWDXXXXXXXXXXXXALYCVQEFGN------GGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLCSG-AWQTTIGVCSIYA*ITXYTH*LESRNILPGSAEYXKVPD 875
            ME +R+ EFPH +MD+RPRKR RL WD             ++C QE GN       G P+   SS+    + R GSPPWR DDKDGHY+F +G++LTPRY+I SKMGEGTFGQV+EC+D E+KE+VA+KIVR + KYREAAMIEI++LQ+L ++D GG RCVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDL     WQ    V  ++     +T  L+  NIL  S++Y K+P+
Sbjct:    1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPSDNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTD-LKPENILLVSSDYVKIPE 241          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.687e-56
Identity = 120/229 (52.40%), Postives = 153/229 (66.81%), Query Frame = 3
Query:  198 KNMDK-RPRKRPRLTWDXXXXXXXXXXXXALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLCSG-AWQTTIGVCSIYA*ITXYTH*LESRNILPGSAEYXKVPDN 878
            ++MDK R RKRPR+TWD                ++  G+ G               R  SPP R DD+DGHYVF++ +NLTPRY+ILSKMGEGTFG+V+EC+D + KE VAIKI+RSI KYR+AAMIEIDVLQ+L ++D G TRCVQ++NWFDYRNHICIVFEKLGPSL+DFL++N Y +FP+ L      Q    V  ++     +T  L+  NIL  S+E  K+PDN
Sbjct:    7 ESMDKERVRKRPRMTWDEAPAEPEAKRAV----IKGHGSDG---------------RILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTD-LKPENILLVSSENVKLPDN 215          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.276e-32
Identity = 57/120 (47.50%), Postives = 89/120 (74.17%), Query Frame = 3
Query:  390 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 746
            DD DGH ++  G+ L  RY+I++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA +EI+ L+++A+ D      CV++ +WFDY  H+CIVFE LG S++DFLR+N+Y  +P+D
Sbjct:  461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580          

HSP 2 Score: 33.8834 bits (76), Expect = 1.276e-32
Identity = 17/38 (44.74%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            +PL  VR +  QL  SV F+H+ R  HTD K E    V
Sbjct:  577 YPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFV 614          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 2.826e-32
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 3
Query:  366 TGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARND-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 743
            T   P   DD DGHY          RY ++  +G GTFG+V++C+D       AIK+ R+I KYREA++IE+ VLQ +A +D     +C+Q+R++FDYR HICIV +  G S++DFL+ N+Y  FP+
Sbjct:  336 TAFDPSTFDDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPL 462          

HSP 2 Score: 40.4318 bits (93), Expect = 2.826e-32
Identity = 19/38 (50.00%), Postives = 25/38 (65.79%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            FPL  ++ L +QL +SVAF+H L  +HTD K E   LV
Sbjct:  460 FPLKHIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLV 497          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.290e-30
Identity = 56/120 (46.67%), Postives = 85/120 (70.83%), Query Frame = 3
Query:  390 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARNDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 743
            DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EAA +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:  145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264          

HSP 2 Score: 31.9574 bits (71), Expect = 3.290e-30
Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            +P+  VR +  QL ++V F+H+ +  HTD K E    V
Sbjct:  262 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFV 299          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 4.268e-30
Identity = 55/120 (45.83%), Postives = 86/120 (71.67%), Query Frame = 3
Query:  390 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 743
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct:  286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 405          

HSP 2 Score: 32.7278 bits (73), Expect = 4.268e-30
Identity = 15/38 (39.47%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            +PL  VR +  QL  ++ F+HE +  HTD K E    V
Sbjct:  403 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 440          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 4.268e-30
Identity = 55/120 (45.83%), Postives = 86/120 (71.67%), Query Frame = 3
Query:  390 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 743
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct:  286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 405          

HSP 2 Score: 32.7278 bits (73), Expect = 4.268e-30
Identity = 15/38 (39.47%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            +PL  VR +  QL  ++ F+HE +  HTD K E    V
Sbjct:  403 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 440          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 4.284e-30
Identity = 55/120 (45.83%), Postives = 86/120 (71.67%), Query Frame = 3
Query:  390 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 743
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct:  138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 257          

HSP 2 Score: 32.7278 bits (73), Expect = 4.284e-30
Identity = 15/38 (39.47%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            +PL  VR +  QL  ++ F+HE +  HTD K E    V
Sbjct:  255 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 292          
BLAST of EY693062 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.284e-30
Identity = 55/120 (45.83%), Postives = 86/120 (71.67%), Query Frame = 3
Query:  390 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 743
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct:  138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 257          

HSP 2 Score: 32.7278 bits (73), Expect = 4.284e-30
Identity = 15/38 (39.47%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  736 FPLIFVRELGRQLLESVAFMHELRXIHTDXKAEIFFLV 849
            +PL  VR +  QL  ++ F+HE +  HTD K E    V
Sbjct:  255 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 292          
The following BLAST results are available for this feature:
BLAST of EY693062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
AFC1_ARATH1.118e-8663.67Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC2_ARATH3.732e-7457.38Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC3_ARATH2.687e-5652.40Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
DOA_DROME1.276e-3247.50Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
LKH1_SCHPO2.826e-3244.09Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK2_HUMAN3.290e-3046.67Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
CLK3_MOUSE4.268e-3045.83Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN4.268e-3045.83Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_RAT4.284e-3045.83Dual specificity protein kinase CLK3 OS=Rattus nor... [more]
CLK3_BOVIN4.284e-3045.83Dual specificity protein kinase CLK3 OS=Bos taurus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-D04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693062 ID=EY693062; Name=EY693062; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGATCCCCAGTTAGGGTTTCCAACACTGAAAATCATTTCTT
CAAAATTTCCTTAATTTTTTACTCTCAATTTTTTTTAAAGCATTATGATT
CAAATTGAGCTTAATCCATGGCTCTGCTAGGTTTTTTTAATTGAAAATTT
AAACAATAAAAGAAATGGAAACGCAGAGAATTATAGAATTTCCGCATAAA
AACATGGACAAGCGTCCCAGAAAACGACCCCGTTTAACGTGGGACGTTCC
GCCTCCTCTTCCTCCTCCCAAGGTTCTTCCGGCTCTGTATTGTGTTCAGG
AGTTTGGGAATGGAGGAATGCCCAATTATGCCTGTTCATCCATGTTTTAT
GGTGCGATTCCTCGCACCGGATCACCTCCTTGGAGACCTGATGATAAAGA
CGGACATTACGTTTTTGCCATCGGAGAAAATTTAACTCCTCGCTACAGGA
TTCTCAGCAAAATGGGTGAAGGGACATTTGGGCAAGTCGTGGAATGTTTT
GACAATGAGAAGAAGGAACTTGTGGCAATCAAAATTGTTCGCTCTATAAA
CAAGTATCGTGAAGCAGCCATGATCGAAATTGATGTTCTACAGAGGCTTG
CCAGGAATGACATTGGTGGCACCCGTTGTGTGCAAATACGGAATTGGTTT
GACTATCGNAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTT
ATACGATTTTCTCCGCAAAAACAGCTATCGNTCATTTCCCATTGATCTTT
GTTCGGGAGCTTGGCAGACAACTATTGGAGTCTGTAGCATTTATGCATGA
ATTACGTNCTATACACACTGACTNGAAAGCAGAAATATTCTTCCTGGTTC
CGCTGAGTATGNTAAAGTCCCTGATAATAGTTTCTATCACGATCGTCAAA
GATTGTTCCTATTT
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