EY693046

Overview
NameEY693046
Unique NameEY693046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY693046_ssr221 microsatellite EY693046_ssr221:221..232. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.553e-75
Identity = 153/230 (66.52%), Postives = 168/230 (73.04%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL------IEDSRVMMILCLTD--SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY*RFVR 744
            I VSKLRGKR              NWLQVGDDLN R L++L+KK+GDV LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVED K DP+AAT GIVLRRRLQL+MY     +        ++D     +  L    SRLA   E        +YGD IP LRPF+RGY + V+
Sbjct:   21 IAVSKLRGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDDPLFNKLKALNGERSRLAQSFE-------YNYGDFIPILRPFLRGYLKLVK 243          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.553e-75
Identity = 153/225 (68.00%), Postives = 166/225 (73.78%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL-----IEDSRVMMILCLTD---SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSPD +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAA+VVED K +PEAATNGIVLRRRLQLMMY     +        ED  +   L   +   SRLA            +YGD IP LRPF+RGY
Sbjct:   21 ILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNKLKALNGERSRLA-------QSFDYNYGDFIPILRPFLRGY 238          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.325e-74
Identity = 152/228 (66.67%), Postives = 168/228 (73.68%), Query Frame = 1
Query:   85 VSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL-----IEDSRVMMILCLTD---SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY*RFVR 744
            VSKLRGK+              NWLQVGDDLNHRNLSD AKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAARVVED K +PE+ATNGIVLRRRLQLMMY     +        ED  + + L   +   SRLA   E        +YGD IP LRPF+RGY R  +
Sbjct:   23 VSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFVKLKALNGERSRLAQGFE-------YNYGDFIPILRPFLRGYLRICK 243          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 6.575e-74
Identity = 148/223 (66.37%), Postives = 162/223 (72.65%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL------IEDSRVMMILCLTDSRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+LLLRMGQRNLVVVSSP+ +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAA+VVED K +P AAT+GIVLRRRLQLMMY     +         ED     +  L   R              +YGD IP LRPF+RGY
Sbjct:   21 ILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFNKLKALNGER-----SRLAQSFDYNYGDFIPILRPFLRGY 238          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.465e-73
Identity = 148/225 (65.78%), Postives = 164/225 (72.89%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL------IEDSRVMMILCLTD--SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            IT+SKLRGK+              NWLQVGDDLN RNL D AKK+GD+ +LRMGQRNLVVVSSP+ AK+VLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQ RF WEDEAARVVED K +PEAATNGIVLR RLQL+MY     +        ++D   + +  L    SRLA   E        H+GD IP LRPF+RGY
Sbjct:   22 ITISKLRGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVKANPEAATNGIVLRNRLQLLMYNNMYRIMFDRRFESVDDPLFLKLKALNGERSRLAQSFE-------YHFGDFIPILRPFLRGY 239          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.762e-72
Identity = 146/225 (64.89%), Postives = 163/225 (72.44%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL------IEDSRVMMILCLTD--SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I +SKLRG+R              NWLQVGDDLNHRNL+DLAK++GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ RF WE EAA VV+D + +P+AA  GIVLRRRLQLMMY     +         ED   + +  L    SRLA   E        +YGD IP LRPF++GY
Sbjct:   21 IAISKLRGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFE-------YNYGDFIPILRPFLKGY 238          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.371e-71
Identity = 146/225 (64.89%), Postives = 164/225 (72.89%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL-----IEDSRVMMILCLTD---SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I +SKLRGK+              NWLQVGDDLNHRNL+DLAK++G++LLLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE EAA VV+D K +P AAT GIV+RRRLQLMMY     +        ED  + + L   +   SRLA   E        +YGD IP LRPF+R Y
Sbjct:   21 ILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIMFDRRFESEDDPLFLKLKALNGERSRLAQSFE-------YNYGDFIPILRPFLRNY 238          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.338e-71
Identity = 145/225 (64.44%), Postives = 165/225 (73.33%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL-----IEDSRVMMILCLTD---SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I +SKLRGKR              NWLQVGDDLNHRNL+DLAKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VV+D K +P+AAT G+V+R+RLQLMMY     +        ED  + + L + +   SRLA   E        +YGD IP LRPF++GY
Sbjct:   21 IFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLFVKLKMLNGERSRLAQSFE-------YNYGDFIPILRPFLKGY 238          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.161e-70
Identity = 145/225 (64.44%), Postives = 160/225 (71.11%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL------IEDSRVMMILCLTD--SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I VS LRG++              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VVED K +P+AA +G V+RRRLQLMMY     +         ED     +  L    SRLA   E        +YGD IP LRPF++GY
Sbjct:   21 IAVSTLRGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFE-------YNYGDFIPILRPFLKGY 238          
BLAST of EY693046 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.516e-70
Identity = 144/225 (64.00%), Postives = 161/225 (71.56%), Query Frame = 1
Query:   79 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDDKNDPEAATNGIVLRRRLQLMMYTTCTGLCL------IEDSRVMMILCLTD--SRLAW*EEXCGPXX*VHYGDSIPTLRPFMRGY 729
            I VSKLRGKR              NWLQVGDDLNHRNL+ LAK++GD+ LLRMGQRNLVVVSSPD AKEVLHTQGVEFGSRTRNVVFDIFTG+GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VV+D + +P+AA +G+V+RRRLQLMMY     +         ED     +  L    SRLA   E        +YGD IP LRPF++GY
Sbjct:   21 IVVSKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRFESEEDPLFQRLKALNGERSRLAQSFE-------YNYGDFIPILRPFLKGY 238          
The following BLAST results are available for this feature:
BLAST of EY693046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
TCMO_RUTGR4.553e-7566.52Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_POPKI4.553e-7568.00Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CATRO1.325e-7466.67Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_POPTM6.575e-7466.37Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_PETCR1.465e-7365.78Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_GLYEC2.762e-7264.89Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_HELTU1.371e-7164.89Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_ZINEL2.338e-7164.44Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_SOYBN1.161e-7064.44Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU1.516e-7064.00Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-B12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693046 ID=EY693046; Name=EY693046; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGCGTAAACATGGATCTCCTCTTGCTGGAAAAGACGCTTTT
AGCCCTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCG
GAAAGCGCTTCAAGCTTCCCCCCGGCCCCCTCCCCGTCCCCGTCTTCGGC
AACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTT
AGCCAAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAACC
TCGTCGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTCCTGCACACGCAG
GGAGTGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCAC
TGGGAAGGGTCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCGAA
AGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTCAG
CAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTTGTTGAGGATGA
TAAGAATGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGC
TGCAGCTTATGATGTACACAACATGTACAGGATTATGTTTGATAGAAGAT
TCGAGAGTCATGATGATCCTTTGTTTAACAGATTCAAGGCTTGCATGGTG
AGAGGAGTNCTGTGGCCCAAANNCTTGAGTACATTACGGGGACTCTATTC
CCACTTTGAGACCTTTCATGAGAGGCTACTGAAGATTTGTACGGAGTCAC
AGAAAGAGACTCCAGCTCTTCAGGACTACTTTGNTGACGAGAGAAGAAAT
TGGCAGCACNATNACATGATTAATGAAAGCTTGAATGCGCATCGATCTAT
TTTGACCCCTCAACAAGGGGGAATCAACGAGACACGTTTTATCTCGTTGA
GACATCAAGTTGCGCATCAAAACCTTTGGCGACCCAT
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