EY692985

Overview
NameEY692985
Unique NameEY692985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9262 contig Csv1_Contig9262:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692985 vs. ExPASy Swiss-Prot
Match: UGPI6_ARATH (Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis thaliana GN=At1g61900 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.132e-34
Identity = 71/110 (64.55%), Postives = 85/110 (77.27%), Query Frame = 3 
Query:   12 ITADVFKLCHISLKDFTLQAAGNQESGCLLPSLPSDATFDKSSGISFICDLNDNIPAPWPSSSRLPTQSCNSSVRIPALPAAASAQSGLYNEALKFYQLFASSAILLMLI 341
            IT ++F +CHISLKDF+LQ  GNQESGCLLPSLPSDA FDK +GISF CDLNDNIPAPWPSSS     +C   VRIPALPAAAS+Q  L++E +    +F  S +L+ML+
Sbjct:  324 ITKNIFSVCHISLKDFSLQV-GNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSSSLSSASTCKKPVRIPALPAAASSQPRLHDEGVTRLVIFVLSMLLVMLL 432
The following BLAST results are available for this feature:
BLAST of EY692985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UGPI6_ARATH6.132e-3464.55Uncharacterized GPI-anchored protein At1g61900 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-E08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692985 ID=EY692985; Name=EY692985; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGATAACTGCAGATGTTTTTAAACTGTGTCATATAAGTCTC
AAAGATTTCACCCTACAAGCTGCTGGAAATCAAGAATCTGGATGCCTCCT
GCCGAGCTTGCCTTCAGATGCAACGTTTGACAAGTCTTCAGGGATTAGTT
TTATTTGTGATCTGAATGACAACATTCCAGCCCCATGGCCTTCTTCATCT
CGATTACCAACTCAATCATGCAATAGTTCTGTTAGAATTCCTGCACTTCC
TGCTGCTGCATCTGCTCAAAGTGGTCTTTATAATGAGGCTTTGAAATTTT
ATCAGCTCTTTGCTTCGTCAGCGATTCTGTTGATGCTCATATAGATTTAT
AGGTCATTCTTGCTTATCATTTACGTTGAGAGAGCTTTTTTGTATTACCA
ACACCAATCCCTCAGGCCTTACAAATGAAGATAGCATAACACGGTTCTGT
TGGGAAAACTTACTATATATCACCCAGGCGTGAGCTGCCTTGGTTCATTG
GAAGGAGAATCTTAGCCTGGTTTTCAAGTTTGTGTTTCTGGTCACATTAA
TTATTGATTCTTACTTGTGGTTCTCAATAATTTTTTCTGTAAAGATGTAT
ATGTAAAATGAAGGAAGTCATACTATTATCTACCTATCTGACTCTGCCAT
GTAAATTTTGCCCCTTTTGTAGGACATTGTAGATCAGGACTTTTACACTG
CNTAAAGCTATGAATTTAATAATTATCTGCAATAATTGCAGAAACACTTT
TGAAGAGTAAAAAAAAAAAAAGGGCGGCGCTCTAGAGACCCAAGTTACGT
ACCTGGCATGGACGTATAGTCTTTAAATGGCACTAAATCCATTACTGGCG
GGGTTTACACCTCTGACTGGGAAACTGGGGTTACCACTA
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