EY692984

Overview
NameEY692984
Unique NameEY692984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692984 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.563e-46
Identity = 101/177 (57.06%), Postives = 125/177 (70.62%), Query Frame = 2
Query:  386 GSADALPGFREFNLDQLRAATSGFCTDNIVSEHGEKAPNVVYKGRLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGQLRSERXVNLIGCCCEGRXRLLVAEFMPNETLSKHLFHWETXP*MGNEVRV---LCISHSSGYCSSKGR---HISRPYTYRFYWIGWNPSSLLGLMKKEK 898
            G ++ LP FREF+++ +R ATSGF  +NIVSEHGE+APNVVYKG+L ++ R IAVKRFNR +WPDSRQFLEEA+AVGQLR+ R  NL+GCC E   RLL+AEFMPNETL+KHLFHWE+ P M   +R+   L I+ +  YC+SKGR   H    Y   F        S  GLMK  +
Sbjct:   33 GESNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRR-IAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQP-MKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSR 207          
BLAST of EY692984 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.987e-40
Identity = 91/176 (51.70%), Postives = 112/176 (63.64%), Query Frame = 2
Query:  386 GSADALPGFREFNLDQLRAATSGFCTDNIVSEHGEKAPNVVYKGRLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGQLRSERXVNLIGCCCEGRXRLLVAEFMPNETLSKHLFHWETXP-*MGNEVRV-LCISHSSGYCSSKGR---HISRPYTYRFYWIGWNPSSLLGLMKKEK 898
            G    +P F EF+   L+AAT+ F +DNIVSE GEKAPN+VYKGRL +  RWIAVK+F + AWP+ +QF EEA  VG+LR  R  NLIG CC+G  RLLVAEFMPN+TL+KHLFHWE         +RV   I+ +  YCS++GR   H    Y   F   G    S  GLMK  +
Sbjct:   50 GGGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNR-RWIAVKKFTKMAWPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSR 224          
BLAST of EY692984 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.510e-22
Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 2
Query:  404 PGFREFNLDQLRAATSGFCTDNIVSEHGEKAPNVVYKGRLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGQLRSERXVNLIGCCCEGRXRLLVAEFMPNETLSKHLF 727
            P   +F+   L+ AT+ F  +NIVS+   +  +VV+KGRL     ++A+KRFN  AW D + FLEEA+ VG+LR +R VNLIG CC+G  R LVA+FM N+TL+K LF
Sbjct:   33 PPLTKFSFSALKTATNHFSPENIVSD---QTSDVVFKGRL-QNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLF 136          
BLAST of EY692984 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 2
Query:  422 NLDQLRAATSGFCTDNIVSEHGEKAPNVVYKGRLVDEDRWIAVKRFNRS--AWPDSRQFLEEARAVGQLRSERXVNLIGCCCEGRXRLLVAEFMPNETLSKHLFHW 733
            ++  LR+ T+ F +DNI+   G     VVYKG L D  + IAVKR      A     +F  E   + ++R    V L+G C +G  +LLV E+MP  TLS+HLF W
Sbjct:  577 SIQVLRSVTNNFSSDNILGSGGF---GVVYKGELHDGTK-IAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEW 678          
BLAST of EY692984 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 2
Query:  404 PGFREFNLDQLRAATSGFCTDNIVSEHGEKAPNVVYKGRLVDEDRW----------IAVKRFNRSAWPDSRQFLEEARAVGQLRSERXVNLIGCCCEGRXRLLVAEFMPNETLSKHLF 727
            P  + F   +L+AAT  F  D+++ E G  +   V+KG  +DE             IAVK+ N+  W   +++L E   +GQ      V LIG C E   RLLV EFMP  +L  HLF
Sbjct:   52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKG-WIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF 165          
BLAST of EY692984 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 2
Query:  404 PGFREFNLDQLRAATSGFCTDNIVSEHGEKAPNVVYKGRLVDEDRW---------IAVKRFNRSAWPDSRQFLEEARAVGQLRSERXVNLIGCCCEGRXRLLVAEFMPNETLSKHLF 727
            P  + F+  +L++AT  F  D+++ E G      V+KG + ++            IAVK+ N+  W   +++L E   +GQ      V LIG C E   RLLV EFMP  +L  HLF
Sbjct:   51 PNLKSFSFAELKSATRNFRPDSVLGEGGF---GCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF 164          
The following BLAST results are available for this feature:
BLAST of EY692984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y5126_ARATH2.563e-4657.06Probable serine/threonine-protein kinase At5g41260... [more]
Y4523_ARATH7.987e-4051.70Probable serine/threonine-protein kinase At4g35230... [more]
SSP_ARATH7.510e-2250.00Probable inactive receptor-like kinase SSP OS=Arab... [more]
TMK1_ARATH2.677e-1139.62Probable receptor protein kinase TMK1 OS=Arabidops... [more]
APK1B_ARATH2.677e-1136.44Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH4.567e-1134.19Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692984 ID=EY692984; Name=EY692984; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGCCAAGGAGTTTTCCTTTTTAAAATTTCACTAACTTTCTC
GGTATCCAAACACGATGACCCATTCACACACTTATATTTTGCTGGCTCAT
TTTCTCACTCTTTGCTAAAGCCTTTCTACTCAAGCTTGCTAGAAAGTGAG
TGAAAGTTTTTTAAAAGACATACACTTTACCACTGCTAGCCAATGGGAGC
TCGCTGCTCCAAGTTGTCTCTCTGTTGGTGGCCGTCAAATCTCAAGTCAA
ACCTCCACGAGTCGTCCGATCTCGGTCAGTGAAAAAAATATGCTTTCCGT
CACTTTTCCGAGAAAAATCTGTTATTTTCCCCAGAAAATTGTAAAAGTGG
CTTTTATTTTTCTTTTTGTGTGTTTGTTAGAGAATGGGAGCGCAGACGCG
TTGCCGGGGTTCAGAGAGTTTAATTTGGACCAATTAAGAGCTGCCACGTC
AGGGTTCTGCACGGACAACATAGTATCGGAGCACGGGGAGAAAGCGCCCA
ATGTGGTTTATAAAGGGAGGCTTGTCGATGAAGATCGGTGGATCGCTGTT
AAACGCTTCAATAGATCGGCGTGGCCCGATTCCAGACAGTTCCTTGAGGA
GGCAAGAGCGGTGGGGCAGTTAAGGAGTGAGAGGNTGGTGAATTTGATAG
GGTGTTGCTGTGAAGGGCGAGANAGATTGCTTGTGGCTGAGTTTATGCCA
AATGAGACTCTCTCTAAACATCTTTTCCATTGGGAAACCANCCCATGAAT
GGGCAATGAGGTGAGAGTGCTCTGTATCTCGCACAGCTCTGGATATTGCA
GCAGTAAGGGGAGGCATATATCACGACCTTATACTTATAGATTTTATTGG
ATCGGATGGAATCCCAGCTCCCTGCTTGGGCTTATGAAAAAAGAAAAATG
CAAAGCTTTGTCAAACTTGGTTCACTCCCA
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