EY692979

Overview
NameEY692979
Unique NameEY692979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692979_ssr49 microsatellite EY692979_ssr49:49..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.276e-61
Identity = 130/212 (61.32%), Postives = 152/212 (71.70%), Query Frame = 2
Query:  224 MANIDIEGLLRDVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEIPILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLPH*L-KGXEDSSDGGSNKKNDSLSL 853
            MANIDI G+++D+PND R+PKTKIVCTLGP+SR+VPMLEKLLRAGMNVARFNFSHGTHEY QETL+NL+ AM NTQILCAVMLDTKGPEIRTGFL   K IQLKE  ++      T +  ++    + +  +        ILCADGTITLTVLSCDP   TVRCRCENT  LGER+N +  G  VDLP    K  ED  + G     D ++L
Sbjct:    1 MANIDIAGIMKDLPNDGRIPKTKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCADGTITLTVLSCDPPSGTVRCRCENTATLGERKNVNLPGVVVDLPTLTEKDKEDILEWGVPNNIDMIAL 212          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.922e-59
Identity = 135/221 (61.09%), Postives = 153/221 (69.23%), Query Frame = 2
Query:  224 MANIDIEGLLRDV-PNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEIP--------ILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLPH*L-KGXEDSSDGGSNKKNDSLSL 853
            MANIDIEG+L+   P D R+PKTKIVCTLGPASRSV M EKLLRAGMNVARFNFSHGTH+Y QETLNNL+ AMHNT ILCAVMLDTKGPEIRTGFLK  K IQLKE  +   + I T  ++K          + M   ++P        ILC+DGTITLTVLSCDP+  TVRCRCENT  LGER+N +  G  VDLP    K  ED    G   K D ++L
Sbjct:    1 MANIDIEGILKQQQPYDGRVPKTKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQE---VTITTDYDIK-----GDPEMISMSYKKLPVHLKPGNTILCSDGTITLTVLSCDPDAGTVRCRCENTATLGERKNVNLPGVVVDLPTLTEKDKEDILGWGVPNKIDMIAL 213          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.428e-48
Identity = 106/169 (62.72%), Postives = 125/169 (73.96%), Query Frame = 2
Query:  281 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEIPILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLP 784
            PKTKIVCTLGPASRSVPM+EKLL AGM+VARFNFSHG++EY QETL+NLR AM NT +LCAVMLDTKGPEIRTGFLK  K IQLK+  ++        +  +K    + +      +  + ILCADGTI+L VLSCD  + TVRCRCENT MLGER+N +  G  VDLP
Sbjct:    7 PKTKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCADGTISLKVLSCDKEKGTVRCRCENTSMLGERKNVNLPGVVVDLP 175          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.578e-47
Identity = 107/175 (61.14%), Postives = 124/175 (70.86%), Query Frame = 2
Query:  281 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SL------EIPILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWGG-VDLP 784
            PKTKIVCTLGPASRSVPM+EKLLRAGMNVARFNFSHG+H+Y QET++NLR AM +T ILCAVMLDTKGPEIRTGFLK  K +QLK+  +   + I T   +K      +  C+    L      +  ILCADG IT TVLSCD      RCRCENT +LGER+N +  G  VDLP
Sbjct:   18 PKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQE---ITISTDYSIKGDE---SMICMSYKKLAEDVKPQSVILCADGQITFTVLSCDKENGLDRCRCENTAVLGERKNVNLPGVIVDLP 186          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 78/207 (37.68%), Postives = 113/207 (54.59%), Query Frame = 2
Query:  221 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKGWKT--IQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEI--------PILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLP 784
            AMA+  +E + R D+ ++  + + T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY + T+ N+R A  +      T    A+ LDTKGPEIRTG +KG  T  ++LK+   L   L     E          + LW+    +         I   DG I+L V   +  ++ V    EN GMLG ++  +  G  VDLP
Sbjct:   20 AMADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMEN------CDENVLWVDYKNLIKVIDVGSKIYVDDGLISLLVK--EKGKDFVMTEVENGGMLGSKKGVNLPGAAVDLP 218          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.346e-22
Identity = 73/181 (40.33%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  287 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEI--------PILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLP 784
            T I+CT+GPASRSV ML++++++GMNVAR NFSHGTHEY  ET+ N+RAA     +  IL    AV LDTKGPEIRTG +KG  T +++        + +    M+K       + LW+    I         I   DG I+L V   +   + +    EN G LG ++  +  G  VDLP
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEK----CDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK--EKGADYLVTEVENGGSLGSKKGVNLPGAAVDLP 219          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 105.145 bits (261), Expect = 5.113e-22
Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 2
Query:  287 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEI--------PILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLP 784
            T I+CT+GPASRSV ML++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +KG  T +++        + +    M+K       + LW+    I         I   DG I+L V   +   + +    EN G LG ++  +  G  VDLP
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEK----CDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK--EKGADFLVTEVENGGSLGSKKGVNLPGAAVDLP 219          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.113e-22
Identity = 67/173 (38.73%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  284 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEIP-----ILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWGG-VDLP 784
            +TKIVCT+GP + S   L KL+  GMNV R NFSHGTH+Y  + + N+R+AM  T  + A+MLDTKGPEIRTG ++     +   V   +   I+    M +       S  +   L+       IL ADG I+L++ + +  +  V CR  N   LGE +N    G  V+LP
Sbjct:   21 RTKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIED----RCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLGENKNVHLPGAIVNLP 189          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 104.375 bits (259), Expect = 8.722e-22
Identity = 71/181 (39.23%), Postives = 98/181 (54.14%), Query Frame = 2
Query:  287 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEI--------PILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLP 784
            T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +KG  T +++        + +    M+K       + LW+    I         +   DG I+L V    P  + +    EN G LG ++  +  G  VDLP
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEK----CDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGP--DFLVTEVENGGFLGSKKGVNLPGAAVDLP 219          
BLAST of EY692979 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.722e-22
Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 2
Query:  221 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKGWKTIQLKEVXKLLYLLIMTXREMKK*SP*ATRSCLWM*SLEI--------PILCADGTITLTVLSCDPNRETVRCRCENTGMLGERRNASSWG-GVDLP 784
            AMA+  +E + R D+ +     + T I+CT+GPASRSV +L++++++GMNVAR NFSHGTHEY  ET+ N+RAA  +           AV LDTKGPEIRTG +KG  T +++        + +    M+K       + LW+    I         +   DG I+L V   +   + +    EN G LG ++  +  G  VDLP
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEK----CDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVK--EKGADFLVTEVENGGSLGSKKGVNLPGAAVDLP 219          
The following BLAST results are available for this feature:
BLAST of EY692979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
KPYC_SOLTU3.276e-6161.32Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_SOYBN8.922e-5961.09Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_ARATH1.428e-4862.72Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYC_TOBAC1.578e-4761.14Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYK_CHICK6.040e-2337.68Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYM_RAT1.346e-2240.33Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYM_MOUSE5.113e-2239.78Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_DICDI5.113e-2238.73Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYM_RABIT8.722e-2239.23Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYM_FELCA8.722e-2236.59Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-E02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692979 ID=EY692979; Name=EY692979; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCACTCTTGTCTGAGTTTATACAATTTAGTGATTTACTAA
TAAATAAATAAATAAATAAAAGGCAGAAACGAATAATTACAAGTAAAAAT
CAGAATTAGACACTCTGGTATTTAGCGCCGTGGAGAAGCAAAGGTGTGCC
AGCGAACAGCTGTTCTGTTGGGGTAACTGACTGATATATTCGTTATTGTG
AACTAGACTTGATAAGGTAAGCTATGGCGAACATAGATATAGAGGGACTC
TTGAGAGATGTGCCAAATGATAAGCGGTTGCCGAAGACGAAGATTGTGTG
TACTTTAGGTCCTGCTTCCCGTTCTGTGCCGATGCTTGAGAAGCTTCTGA
GGGCTGGAATGAATGTTGCTCGTTTCAATTTCTCTCATGGTACGCACGAG
TATCAGCAGGAGACTTTGAACAATCTCAGAGCTGCCATGCACAACACCCA
GATCCTCTGTGCTGTCATGCTCGATACCAAGGGACCCGAGATTCGAACTG
GTTTCCTTAAGGGATGGAAAACCATACAACTTAAAGAAGTCANGAAATTA
CTGTATCTACTGATTATGACTTNCAGGGAAATGAAGAAATGATCACCATG
AGCTACAAGAAGCTGCCTGTGGATGTGAAGCCTGGAAATACCCATCTTGT
GTGCAGATGGCACCATAACCCTGACTGTCTTGTCTTGTGATCCAAATCGG
GAAACTGTCAGGTGCCGTTGTGAGAACACTGGCATGCTAGGCGAGAGAAG
AAATGCATCTTCCTGGGGTGGGGTGGATCTGCCCCACTGACTGAAAGGAT
ANGAGGATTCCTCCGATGGGGGGTCCAATAAAAAGAATGATTCTCTTTCA
TTGGGCGCAG
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