EY692975

Overview
NameEY692975
Unique NameEY692975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 4.727e-67
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRK  GGKVLGFFY
Sbjct:    1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3)

HSP 1 Score: 253.447 bits (646), Expect = 1.375e-66
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRK  GGKVLGFFY
Sbjct:    1 MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 251.906 bits (642), Expect = 4.002e-66
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRK  GGKVLGFFY
Sbjct:    1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3)

HSP 1 Score: 250.366 bits (638), Expect = 1.164e-65
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFGYIVLTTSAGIMDHEEARRK  GGKVLGFFY
Sbjct:    1 MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 1.020e-61
Identity = 116/130 (89.23%), Postives = 122/130 (93.85%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHR+GKIVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFGYIVLTTSAGIMDHEEAR+K  GGKVLGFFY
Sbjct:    1 MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGKVLGFFY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS22A_YEAST (40S ribosomal protein S22-A OS=Saccharomyces cerevisiae GN=RPS22A PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.590e-54
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            M R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK   GK+LGF Y
Sbjct:    1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS22_KLUMA (40S ribosomal protein S22 OS=Kluyveromyces marxianus GN=RPS22 PE=3 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 7.829e-54
Identity = 100/130 (76.92%), Postives = 114/130 (87.69%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            M R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK   GK+LGF Y
Sbjct:    1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKISDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVSGKILGFVY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS22B_YEAST (40S ribosomal protein S22-B OS=Saccharomyces cerevisiae GN=RPS22B PE=1 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 7.829e-54
Identity = 101/130 (77.69%), Postives = 115/130 (88.46%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK   GK+LGF Y
Sbjct:    1 MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS15A_RAT (40S ribosomal protein S15a OS=Rattus norvegicus GN=Rps15a PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 7.829e-54
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVR++VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W   LLPSRQFG+IVLTTSAGIMDHEEARRK  GGK+LGFF+
Sbjct:    1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
[Close]
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS15A_MOUSE (40S ribosomal protein S15a OS=Mus musculus GN=Rps15a PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 7.829e-54
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 3 
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MVR++VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W   LLPSRQFG+IVLTTSAGIMDHEEARRK  GGK+LGFF+
Sbjct:    1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
The following BLAST results are available for this feature:
BLAST of EY692975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
R15A1_ARATH4.727e-6796.1540S ribosomal protein S15a-1 OS=Arabidopsis thalia... [more]
RS15A_BRANA1.375e-6695.3840S ribosomal protein S15a OS=Brassica napus GN=RP... [more]
R15A4_ARATH4.002e-6694.6240S ribosomal protein S15a-4 OS=Arabidopsis thalia... [more]
RS15A_DAUCA1.164e-6594.6240S ribosomal protein S15a OS=Daucus carota GN=RPS... [more]
R15A3_ARATH1.020e-6189.2340S ribosomal protein S15a-3 OS=Arabidopsis thalia... [more]
RS22A_YEAST4.590e-5478.4640S ribosomal protein S22-A OS=Saccharomyces cerev... [more]
RS22_KLUMA7.829e-5476.9240S ribosomal protein S22 OS=Kluyveromyces marxian... [more]
RS22B_YEAST7.829e-5477.6940S ribosomal protein S22-B OS=Saccharomyces cerev... [more]
RS15A_RAT7.829e-5478.4640S ribosomal protein S15a OS=Rattus norvegicus GN... [more]
RS15A_MOUSE7.829e-5478.4640S ribosomal protein S15a OS=Mus musculus GN=Rps1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-D10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692975 ID=EY692975; Name=EY692975; organism=Citrus sinensis; type=EST; length=961bp
CCACGCGTCCGGTTCAATATCCAGTGGAGCATCCAGAGAAGTTTGAACAG
TCTCTTGAAGCTCCCGCTTAACATTCTCAAGGCCTCCAATGTCCTCCCAG
CTGACATTGGGAACTTCCACAACAGTTTCACGCAGAGCAGAGGGGTTGCT
TGTCCCAAGTGCAGTTTGGAAGTGCTCATTTGAAACAGCCATGGAATTAA
GAATCTCAGCATCGATGGTTTCATCTTCCAAGTCAATCACATCCATCTTC
TCCCTGATGCATTGCAGCTCACGTACTCTTTCAGAGGCGCCTCTCCCTGC
TTTGATTTGCCTACGCAACAATGGTGAGAGTTAGTGTTCTGAATGACGCT
CTTAAGAGCATGTATAATGCCGAGAAAAGGGGGAAGCGTCAGGTTATGAT
CAGACCATCCTCCAAGGTTATCATTAAGTTTCTTCTGGTGATGCAAAAGC
ACGGGTACATTGGTGAGTTTGAGTATGTTGATGACCACAGAGCTGGTAAG
ATTGTGGTTGAACTGAACGGAAGATTGAACAAATGTGGGGTTATCAGTCC
CCGTTTTGATGTTGGCGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGC
TTCCCTCAAGACAGTTTGGATACATTGTGCTGACNACTTCTGCTGGCATT
ATGGACCACGAAGAGGCGAGAAGGAAGAAATGTGGTGGTAAAGTGCTTGG
TTTTTTCTACTANGCAAAGTCATATTGAGAATGGGACTTTGAGTTTTGTT
GTGTACTTTGGAAGAAACTTGTCACAATGGGGATAGCTCTCTTNGNNTTA
CTGATTNNATATGCATTNNTAACTCGGATGGGACCCCTTTAGTGAGAAGG
ATGATATTATGTGTACCCCATTATCTCTAGCAGGTGATTTGGGATCATTT
TCCCAGTCTGTAACATCCGATGGGTAATGAGGATATAGTTTATATTTTAT
TTTTTTTGGTA
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