EY692969

Overview
NameEY692969
Unique NameEY692969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9911 contig Csv1_Contig9911:72..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692969 vs. ExPASy Swiss-Prot
Match: Y5848_ARATH (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.177e-15
Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 3 
Query:  156 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG--DSAAAQTVGTGCVLCLETEDXXXXXXXXXXXXXXXXXXXXXXXXXCCGERVGKVKDPYGFTWL 545
            FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS+F+V DVS     + A++ G+G    L T+D                           G + GKV DP+G TW+
Sbjct:   23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE--LGFK-GKVTDPFGVTWI 151
The following BLAST results are available for this feature:
BLAST of EY692969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5848_ARATH1.177e-1540.15Uncharacterized protein At5g48480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-D04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692969 ID=EY692969; Name=EY692969; organism=Citrus sinensis; type=EST; length=843bp
CCACGCGTCCGTCTCTCTCTTTCTCTCTCTTTCTCTCTCCTAGGGTCAGG
TTTCTTTCCTTTGTCTAGACTCCAAAACTCTCTCGCTCAATGGCTGATGT
CCAGGAGGTTCAGAATGGAGCTGCGCCGGAGAAGGCTCCTGCCACCGCGG
CCAGCTTCACGGGGATGAAGCCGCAGTTGCTTGTGGAAGCACCGAAGGCT
ACTGACGCTGTTCAGTTCTACAAGACCGCGTTTGGTGCTGTGGAGATCGG
CCGTAGCGTGGAAACCAAACGCAAGGCTGAACAGGAGCTCCCACTCATCT
CCTGCGCTCAACTGGAGATTGCCGGCTCCACCTTCCTTGTCTCTGACGTT
TCCGGTGACTCTGCTGCTGCACAGACCGTGGGGACCGGATGCGTGCTTTG
CTTGGAGACCGAGGACGTGGAGGCTGCCGTCGCCAAGGCTGTGAGTGCTG
GAGCTGTTGCTGAGGGTGAGCTCGCTGAAGGCAACGGCGCGTGTTGTGGA
GAGCGCGTGGGAAAGGTCAAAGATCCTTATGGCTTCACTTGGCTCATTTG
CTCCCCGGTCAAGAAGTGCGCTGGCGTGGAAGCTTAAGAGCCGCCTGATC
TGATGATCTTTAGATATTGATCTACTATCACATAACTCTCTTTTGTCGTT
CGTCTTTTCTGCTGTGGGTTTATAGCTCTAGGGCTTTTTAGTATTTCGGA
TATCTTGATGATATTGCTGAACCGTGATCATGATGAAGGATGTTTTTGAT
TATTTTTGAGGGACTGACAGCTGCCAGTTATAGACTTCTTGCTACTCTTA
TTATCATTNATCATCCTCCTATTTGCTAGTAAAAAAAAAAAAA
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