EY692949

Overview
NameEY692949
Unique NameEY692949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_THEEB (Protein grpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 2
Query:  335 METLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            +E +++  EA    +D  +    A      ++   LE    +LS+ +    ++ +R++ADF+NFRKRT++E+  L    +  V+  LL V+D+FE A+T I+ +TE EEKI+ SYQ +YKQLVE L  +GV  ++  G PFD
Sbjct:   48 VENVENPAEATPGEEDQASEATSANAADLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFD 189          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_SYNY3 (Protein grpE OS=Synechocystis sp. (strain PCC 6803) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20
Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  401 EALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            E ++   + +     +++   SE+L + + R + ++A+FDNFRKRT++E+       +G  +  LL V+DNFERA+TQIK  ++GE +I+ SYQ +YK LV+ L  LGV P+   G PFD
Sbjct:   69 EEIIAILQKDLASHRQELAEQSEQLDSIKKRYVALAAEFDNFRKRTQREKEEQAKLIKGRTITELLPVVDNFERARTQIKPNSDGENQIHKSYQGVYKNLVDSLKGLGVAPMRPEGKPFD 188          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_SYNE7 (Protein grpE OS=Synechococcus elongatus (strain PCC 7942) GN=grpE PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 2
Query:  359 EALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            EA++  D T A+  EA   + +   +  +R    L  EL  + +  LR++ADF+NFR+RT KER  L   ++   +  LL V+DNF+RA+ QIK Q E  E I+ SYQ +YKQLV+ L  +GV P+   G PFD
Sbjct:   21 EAVSEPDVTVASGQEAAELAAQLALVAADRD--RLKTELDEQNSAYLRLAADFENFRRRTLKEREELELQSKRTTITELLPVIDNFDRARAQIKPQGEEAEAIHKSYQGLYKQLVDCLKRIGVSPMRAEGQPFD 152          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_CYAP7 (Protein grpE OS=Cyanothece sp. (strain PCC 7424) GN=grpE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19
Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 2
Query:  401 EALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFDHCFTSNM 781
            E+LL++ +  K  LE +    ++++ A + R + ++A+FDNFRKRT +E+  L   A+ + +  LL V+DNFERA+ QIK   EGE +I+ SYQ +YK LV+ L  LGV  +   G PFD  +   M
Sbjct:  103 ESLLQTNQSLKDQLEEQ----NQQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNFERARLQIKPSNEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEPFDPMYHEAM 225          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_SYNPW (Protein grpE OS=Synechococcus sp. (strain WH7803) GN=grpE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19
Identity = 53/142 (37.32%), Postives = 79/142 (55.63%), Query Frame = 2
Query:  335 METLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            +ET     E  +++D   AAE+     + E     LER+   L +E    R + +RI+ADFDNFRKR  +++  L        +  +L V+DNFERA+ Q+  Q E  + ++ SYQ +YKQLV++L  LGV P+   G  FD
Sbjct:   23 VETPNDPVETPSASDPGSAAEVSPQTGNNEARLEQLEREHTTLRDEHDVLRGQYMRIAADFDNFRKRQSRDQDDLKIQLTCSTLSEILPVVDNFERARQQLDPQGEEAQALHRSYQGLYKQLVDVLKQLGVAPMRVVGQEFD 164          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_ANASP (Protein grpE OS=Anabaena sp. (strain PCC 7120) GN=grpE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 2
Query:  437 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            +L +++ +L  +L     + +RI+ADF+N+RKRT+KE+  L    +   +  LL ++DNFERA++ +K QTE E  I+ SYQ +YKQLV+ L  LGV P+   G  FD
Sbjct:   79 ELTQQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFD 186          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_ANAVT (Protein grpE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=grpE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 2
Query:  437 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            +L +++ +L  +L     + +RI+ADF+N+RKRT+KE+  L    +   +  LL ++DNFERA++ +K QTE E  I+ SYQ +YKQLV+ L  LGV P+   G  FD
Sbjct:   79 ELTQQINSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFD 186          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_TRIEI (Protein grpE OS=Trichodesmium erythraeum (strain IMS101) GN=grpE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.750e-18
Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 2
Query:  365 LASNDDTKAAEIEALLK-SFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            + S + T   + + LLK ++E  +  LE     L E+ S  +    R+ ADFDNFRKRT+KE+  L T  +   +  LL V+DNFERA++ IK   +GE  I+ SYQS+YKQ+V+ L  LGV  +   G  FD
Sbjct:   54 IQSTESTSKEKDQVLLKEAYELLQTQLETTKYQLEEKESQYK----RLGADFDNFRKRTQKEKEDLDTQVKCSTIMELLPVIDNFERARSHIKPANDGEMAIHKSYQSVYKQMVDSLKRLGVSVMRPEGQEFD 182          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROMS (Protein grpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 50/157 (31.85%), Postives = 90/157 (57.32%), Query Frame = 2
Query:  335 METLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQK 799
            +E + S +E    N++  + + E +  +  ++   + + ++  L +E    + + +RISADFDNFRKR  +++  L      + +  +L ++DNFERA+ Q+K ++E  + ++ SYQ +YKQLVE+L   GV P+   G  FD     + +RE S+K
Sbjct:   23 LENVSSAQELTTENNELSSQKTEEINTEELKNSISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEK 179          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_GLOVI (Protein grpE OS=Gloeobacter violaceus GN=grpE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 57/177 (32.20%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  350 SYKEALASNDDTKAAEIEALLKSFED---EKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFDHCFTSNMREDSQKLMRCDYEDSAGVQLAKALPPRWKG 871
            SY EA  +  +  AAE    +   +    E  DL++K+ +  ++ +       R+ ADFDNFRKRT++E+  L      ++++ +L V DNF+RA+   +   E EEK++NSYQ +Y+Q + +L  +GV  +E  G PFD           + ++R   E+SAGV     +    KG
Sbjct:   17 SYAEAATT--EASAAEATGFIARIDQLAAENSDLQKKLADYEQKYT-------RLMADFDNFRKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEKMGVTAMEAIGQPFDPA-------QHEAILR---EESAGVSQETVVAELQKG 174          
The following BLAST results are available for this feature:
BLAST of EY692949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GRPE_THEEB3.470e-2137.32Protein grpE OS=Thermosynechococcus elongatus (str... [more]
GRPE_SYNY31.010e-2040.00Protein grpE OS=Synechocystis sp. (strain PCC 6803... [more]
GRPE_SYNE71.116e-1941.79Protein grpE OS=Synechococcus elongatus (strain PC... [more]
GRPE_CYAP71.458e-1940.94Protein grpE OS=Cyanothece sp. (strain PCC 7424) G... [more]
GRPE_SYNPW3.248e-1937.32Protein grpE OS=Synechococcus sp. (strain WH7803) ... [more]
GRPE_ANASP4.242e-1942.59Protein grpE OS=Anabaena sp. (strain PCC 7120) GN=... [more]
GRPE_ANAVT5.540e-1942.59Protein grpE OS=Anabaena variabilis (strain ATCC 2... [more]
GRPE_TRIEI2.750e-1841.35Protein grpE OS=Trichodesmium erythraeum (strain I... [more]
GRPE_PROMS8.000e-1831.85Protein grpE OS=Prochlorococcus marinus (strain AS... [more]
GRPE_GLOVI1.365e-1732.20Protein grpE OS=Gloeobacter violaceus GN=grpE PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-B07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692949 ID=EY692949; Name=EY692949; organism=Citrus sinensis; type=EST; length=885bp
TTGCCGACCCACGCGTCCGCGTGCAGCCCCTATTTCCTTAAAATCTCCGA
AACCCATCTGTATTTCCTTCAGACAACGTCTAATAAGCACCAGCAGACTT
TATCATCGGTCAAATTCTCTCCGGTTCGTAAGTGTTCAGTCTCTCCGGTT
CGTAAAGTTCTCTCCTTTAGCTTCAACTGGAGAAACTGAAACCCAAGAGG
AAATTCAGGAACCCCAAATTGAGGAATCTTCCGATGGTGCTGTTGGCATT
GAAGATGGCACTAGTGACGATGATAGCTCTGGAGCTACTAGTGATGACAC
CTCAGATGCTGAGGAAGCACCTACTTCATTCATTATGGAAACACTCCAAT
CATACAAAGAAGCTTTGGCCAGTAATGACGATACCAAAGCTGCTGAAATA
GAGGCTTTATTAAAATCCTTTGAAGATGAGAAAATTGATCTTGAGAGGAA
AGTTGTTAACTTGTCTGAAGAATTGTCAGCTGAGAGGGCTCGTATTCTTA
GGATCAGTGCTGACTTTGACAATTTTCGTAAGAGAACGGAGAAGGAACGC
CTTTCACTGGTAACAAATGCTCAAGGAGAAGTCATGGAGAGATTGTTGCA
AGTTTTGGATAATTTTGAGAGAGCTAAAACTCAAATTAAGGTGCAGACCG
AGGGAGAGGAGAAAATAAACAACAGCTATCAGAGCATATATAAGCAATTA
GTGGAAATCCTANGATCACTTGGTGTTTGTCCTGTGGAGAACGGTGGGAA
TCCTTTTGATCATTGCTTCACGAGCAATATGCGCGAGGATTCACAGAAAT
TGATGAGGTGTGATTATGAAGATTCCGCAGGGGTTCAACTGGCGAAGGCT
CTACCTCCTCGATGGAAAGGATCGGCTGGTCAGGG
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