EY692936

Overview
NameEY692936
Unique NameEY692936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2)

HSP 1 Score: 345.51 bits (885), Expect = 2.473e-94
Identity = 178/256 (69.53%), Postives = 201/256 (78.52%), Query Frame = 3
Query:  156 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTI-L*Y*HGF*KL**LSPNGITCPHVPGICPXXTI-GXLRMTGFCKQRYS*DT-AALE 896
            MKVIDKIQ      K  FSFEFFPPKTEDGV+NLFERMDRMVA+ P FCDITWGAGGSTADLTLDIA+RMQN +CVE+MMHLTCTNMPVEKIDHAL+TI+SNGIQNVLALRGDPPHGQDKFVQ++GGF CALDLV HIRS YGDYFGITVAGYPE HPD IG +G+ASNE+YQSDL YLKKK       ++ Q++Y   I L + +   ++      GI+CP VPGI P     G LRMTGFCK +   +  AALE
Sbjct:    1 MKVIDKIQSLADEGKTAFSFEFFPPKTEDGVDNLFERMDRMVAYGPTFCDITWGAGGSTADLTLDIASRMQNVVCVESMMHLTCTNMPVEKIDHALETIRSNGIQNVLALRGDPPHGQDKFVQVEGGFDCALDLVNHIRSKYGDYFGITVAGYPEAHPDVIGENGLASNEAYQSDLEYLKKKIDAGADLIVTQLFYDTDIFLKFVNDCRQI------GISCPIVPGIMPINNYRGFLRMTGFCKTKIPVEVMAALE 250          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.357e-92
Identity = 174/256 (67.97%), Postives = 199/256 (77.73%), Query Frame = 3
Query:  156 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTI-L*Y*HGF*KL**LSPNGITCPHVPGICPXXTI-GXLRMTGFCKQRYS*D-TAALE 896
            MKV+DKI+      +  FSFEFFPPKTEDGVENLFERMDR+V++ P FCDITWGAGGSTADLTL+IA+RMQN ICVETMMHLTCTNMP+EKIDHAL+TI+SNGIQNVLALRGDPPHGQDKFVQ++GGFACALDLV HIRS YGDYFGITVAGYPE HPD I  DG+A+ ESYQSDL YLKKK       ++ Q++Y   I L + +   ++      GI CP VPGI P     G LRM GFCK +   + TAALE
Sbjct:    1 MKVVDKIKSVTEQGQTAFSFEFFPPKTEDGVENLFERMDRLVSYGPTFCDITWGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAYLKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQI------GINCPIVPGIMPISNYKGFLRMAGFCKTKIPAELTAALE 250          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.948e-92
Identity = 174/256 (67.97%), Postives = 201/256 (78.52%), Query Frame = 3
Query:  156 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTI-L*Y*HGF*KL**LSPNGITCPHVPGICPXXTI-GXLRMTGFCKQRY-S*DTAALE 896
            MKVI+KI E     +  FSFE+FPPKTE+GVENLFERMDRMVAH P+FCDITWGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKIDHAL+TIKSNGIQNVLALRGDPPHGQDKFVQ++GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I  +G A+ E+Y +DL YLK+K       ++ Q++Y   I L + +   ++      GITCP VPGI P     G LRMTGFCK +  S  TAAL+
Sbjct:    1 MKVIEKILEAAGDGRTAFSFEYFPPKTEEGVENLFERMDRMVAHGPSFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAYSNDLAYLKRKVDAGADLIVTQLFYDTDIFLKFVNDCRQI------GITCPIVPGIMPINNYKGFLRMTGFCKTKIPSEITAALD 250          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 2.166e-90
Identity = 173/256 (67.58%), Postives = 198/256 (77.34%), Query Frame = 3
Query:  156 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTI-L*Y*HGF*KL**LSPNGITCPHVPGICPXXTI-GXLRMTGFCKQRYS*D-TAALE 896
            MKVI+KIQE  A  + VFSFE+FPPKTE+G++NLFERMDRMVAH P FCDITWGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKID AL TIKSNGIQNVLALRGDPPHGQDKFVQ+ GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I     A+ E+Y +DL YLK+K       ++ Q++Y   I L + +   ++      GITCP VPGI P     G LRMTGFCK +   + TAALE
Sbjct:    1 MKVIEKIQEAAADGRTVFSFEYFPPKTEEGLDNLFERMDRMVAHGPNFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDDALTTIKSNGIQNVLALRGDPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQSTEGATPEAYSNDLAYLKQKVDAGADLIITQLFYDTDIFLKFVNDCRQI------GITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALE 250          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR2_YEAST (Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae GN=MET13 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 7.231e-44
Identity = 92/199 (46.23%), Postives = 128/199 (64.32%), Query Frame = 3
Query:  156 MKVIDKI-QEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMV-AHNPAFCDITWGAGGST-ADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYY 725
            MK+ +K+ Q +  S K  +SFE+F PKT  GV+NL++RMDRM  A  P F DITW AGG   + L+ D+    Q+ + +ET MHLTCTNMP+  ID AL+    +G QN+LALRGDPP   + +  ++GGF  A DL+K+I+S YGD+F I VAGYPE HP+         N+  + DL YLK+K      +++ Q++Y
Sbjct:    1 MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGGRLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRDAENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPE-------LPNKDVKLDLEYLKQKIDAGGDFIITQMFY 192          

HSP 2 Score: 23.483 bits (49), Expect = 7.231e-44
Identity = 10/28 (35.71%), Postives = 13/28 (46.43%), Query Frame = 1
Query:  721 IITXLFYDTDMVSKSCDDCRPMELPAPM 804
            IIT +FYD D     C   R   +  P+
Sbjct:  186 IITQMFYDVDNFINWCSQVRAAGMDVPI 213          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 6.843e-38
Identity = 82/161 (50.93%), Postives = 107/161 (66.46%), Query Frame = 3
Query:  156 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHN-PAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGH-PD 632
            MK+ DK+      +KV +S+EFFPPKT  GV+NL+ R+DRM     P F D+TWGAGG++++LT  I N +Q    V+T MHLTCTNM  E ID AL+     G +N+LALRGDP    D + + + GF  A DLV++IR+ Y D F I VAGYPEG+ PD
Sbjct:    1 MKISDKLLHPDWKEKVTYSYEFFPPKTSTGVQNLYNRIDRMKTWGRPMFVDVTWGAGGTSSELTPGIVNVIQTDFEVDTCMHLTCTNMSTEMIDAALKRAHETGCRNILALRGDPVKDTD-WTEGESGFRYASDLVRYIRTHYNDEFCIGVAGYPEGYSPD 160          

HSP 2 Score: 22.3274 bits (46), Expect = 6.843e-38
Identity = 10/29 (34.48%), Postives = 14/29 (48.28%), Query Frame = 1
Query:  721 IITXLFYDTDMVSKSCDDCRPMELPAPMF 807
            I+T +FYD D      D  R   +  P+F
Sbjct:  181 IVTQMFYDVDNFIAWVDKVRAAGINIPIF 209          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR2_SCHPO (Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe GN=met11 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.352e-36
Identity = 95/244 (38.93%), Postives = 138/244 (56.56%), Query Frame = 3
Query:  156 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHN-PAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTIL*Y*HGF*KL**LSPNGI-TCPHVPGICPXXTIGXL-RMTGFC 860
            MK++D I +K+ +    +SFE+FPPKT  G+ENL  R+ RM  +  P F  +TWG  GSTA++++ +A  ++    +   +HLTCTN+    ID AL+T K  GI+N+LALRGDPP   D +      F  A+DLV++IR  YGDYF I VA YPEGH D+  P+    ++    D+ +L +K      +++ QI+Y          F +    S N +   P +P I P  + G L RMT  C
Sbjct:    1 MKIVDLI-DKIPNGNAFYSFEYFPPKTTVGLENLSSRITRMSRNMMPLFSSVTWGTAGSTAEVSIYLAKMLEQHHKIPACLHLTCTNVDKAIIDKALETAKEYGIRNILALRGDPPLNSDHWEGKVSEFEHAVDLVRYIREKYGDYFCIGVAAYPEGHVDSNVPE---LSKDPLRDIPFLIEKVEAGADFIITQIFYEPEAFIKFENFVRN--HSSNALRNIPIIPAIMPIQSYGSLKRMTRLC 238          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 90/236 (38.14%), Postives = 132/236 (55.93%), Query Frame = 3
Query:  168 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTIL*Y*HGF*KL**LSPNGITCPHVPGICPXXTIGXLR 845
            DK++ ++ S    FS EFFPP+T +G  NL  R DRM A  P F D+TW   G         ++ IA+   N   +ET++H+TC    +E+I   L   K  G++N++ALRGDP    D++ + +GGF  A+DLVKHIRS +GDYF + VAGYP+GHP+           S+++DL +LK+K      +++ Q+++          F  +   +  GITCP VPGI P      LR
Sbjct:   47 DKMRRRMESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLFIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCCQRLEEITGHLHKAKQLGLKNIMALRGDPIG--DQWEEEEGGFNYAVDLVKHIRSEFGDYFDLCVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFEADTF-----FRFVKACTDMGITCPIVPGIFPIQGYHSLR 266          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 6.844e-36
Identity = 89/236 (37.71%), Postives = 132/236 (55.93%), Query Frame = 3
Query:  168 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTIL*Y*HGF*KL**LSPNGITCPHVPGICPXXTIGXLR 845
            +K++ ++ S    FS EFFPP+T +G  NL  R DRM A  P + D+TW   G         ++ IA+   N   +ET++H+TC    +E+I   L   K  G++N++ALRGDP    D++ + +GGF  A+DLVKHIRS +GDYF I VAGYP+GHP+           S+++DL +LK+K      +++ Q+++          F  +   +  GITCP VPGI P      LR
Sbjct:   47 EKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIG--DQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFEADTF-----FRFVKACTDMGITCPIVPGIFPIQGYHSLR 266          
BLAST of EY692936 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.844e-36
Identity = 91/236 (38.56%), Postives = 131/236 (55.51%), Query Frame = 3
Query:  168 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK------WMLVQIYYHXTIL*Y*HGF*KL**LSPNGITCPHVPGICPXXTIGXLR 845
            +K++ K+ S    FS EFFPP+T  G  NL  R DRM A  P F D+TW   G         ++ IA+   N   +ET++H+TC +   E+I   L   K  G++N+LALRGDP    D++ + +GGF  A DLVKHIR+ +GDYF + VAGYP+GHP+          ES+++DL +LK+K      +++ Q+++          F  +   S  GITCP +PGI P      LR
Sbjct:   46 EKMKRKMDSGDKWFSLEFFPPRTAQGAVNLISRFDRMGAGGPLFVDVTWHPAGDPGSDKETSSMVIASTAVNYCGLETILHMTCCHQSREEITGHLNKAKQLGLKNILALRGDPIG--DQWEEEEGGFNYATDLVKHIRNEFGDYFDVCVAGYPKGHPE---------GESFEADLKHLKEKVAAGADFIITQLFFEAETF-----FRFVKACSEIGITCPVLPGIFPIQGYHSLR 265          
The following BLAST results are available for this feature:
BLAST of EY692936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
MTHR2_ARATH2.473e-9469.53Methylenetetrahydrofolate reductase 2 OS=Arabidops... [more]
MTHR1_ARATH1.357e-9267.97Methylenetetrahydrofolate reductase 1 OS=Arabidops... [more]
MTHR1_MAIZE3.948e-9267.97Methylenetetrahydrofolate reductase 1 OS=Zea mays ... [more]
MTHR_ORYSJ2.166e-9067.58Probable methylenetetrahydrofolate reductase OS=Or... [more]
MTHR2_YEAST7.231e-4446.23Methylenetetrahydrofolate reductase 2 OS=Saccharom... [more]
MTHR1_SCHPO6.843e-3850.93Methylenetetrahydrofolate reductase 1 OS=Schizosac... [more]
MTHR2_SCHPO2.352e-3638.93Methylenetetrahydrofolate reductase 2 OS=Schizosac... [more]
MTHR_MACFA4.012e-3638.14Methylenetetrahydrofolate reductase OS=Macaca fasc... [more]
MTHR_HUMAN6.844e-3637.71Methylenetetrahydrofolate reductase OS=Homo sapien... [more]
MTHR_BOVIN6.844e-3638.56Methylenetetrahydrofolate reductase OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-A06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692936 ID=EY692936; Name=EY692936; organism=Citrus sinensis; type=EST; length=912bp
TCCCACCTCACACACCCACTCTCTTTCACTTTCATCTCGCATCCATTCTT
TCCATTTTTCTTTTTCATAAATCACCCTCGCAGATCTGAACTCAACCGAC
AACTCACTCGTAAACGACCTGTCGGTGGCAGCAGTAGCTACTCTCCGAAC
CAAAAATGAAGGTAATAGACAAGATTCAAGAGAAAGTAGCCTCCGACAAG
GTCGTCTTCTCCTTCGAATTCTTCCCGCCGAAGACGGAAGATGGCGTCGA
GAACTTGTTCGAGCGGATGGACCGTATGGTGGCCCACAACCCGGCATTCT
GCGACATCACTTGGGGGGCGGGTGGCTCCACGGCCGATCTCACGCTTGAC
ATCGCGAACAGGATGCAGAACACGATATGCGTCGAGACGATGATGCATTT
GACGTGCACGAACATGCCCGTCGAGAAGATCGATCACGCTCTTCAGACTA
TTAAGTCCAACGGCATACAGAACGTTCTCGCTCTTCGCGGCGATCCTCCT
CACGGTCAGGATAAGTTCGTTCAGATCCAGGGTGGCTTCGCCTGCGCTCT
TGATCTCGTGAAACATATTAGGTCTGCTTATGGTGATTACTTTGGCATCA
CAGTTGCTGGTTACCCAGAGGGACATCCGGATACCATTGGACCTGATGGC
GTGGCCAGTAATGAATCATATCAAAGTGATCTTCTTTATCTGAAGAAAAA
GTGGATGCTGGTGCAGATCTATTATCACTNCACTATTCTATGATACTGAC
ATGGTTTCTAAAAGTTGTGATGACTGTCGCCCAATGGAATTACCTGCCCC
CATGTTCCTGGAATATGCCCATNANNTACTATAGGNNTTCTGCGCATGAC
TGGCTTTTGCAAACAAAGATACAGCTGAGATACTGCTGCCTTGGAGCTAT
AAGGACATGAAA
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