EY692932

Overview
NameEY692932
Unique NameEY692932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692932 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.586e-20
Identity = 63/146 (43.15%), Postives = 75/146 (51.37%), Query Frame = 3
Query:  294 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASXAYRHCSPCTA---PGAAQSRLKSNSGESDADSD-----RFRWSYRRTG---------XXXXXXXXXXWGEEMEARLXGYRVRVASHSDKSVSGR 680
            MLTCIARSK+ GD+S  QP+             +  KSLTSQLKDMALKAS AYRHC+PCTA    G  Q  +K+N   S   SD     RF+  Y R+                    WG+EMEARL G  +     + KS SGR
Sbjct:    1 MLTCIARSKRAGDESSGQPDDPD---------SKNAKSLTSQLKDMALKASGAYRHCTPCTAAQGQGQGQGPIKNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVWGKEMEARLKG--ISSGEATPKSASGR 135          

HSP 2 Score: 25.0238 bits (53), Expect = 3.586e-20
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  677 SRVDPVVFI-EKMSRRMGGQVEP 742
            +RVDP+VF+ EK  +    QVEP
Sbjct:  136 NRVDPIVFVEEKEPKEWVAQVEP 158          
BLAST of EY692932 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.764e-15
Identity = 56/133 (42.11%), Postives = 72/133 (54.14%), Query Frame = 3
Query:  294 MLTCIARSKQ--PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASXAYRHCSPCTAPGAAQSRLKSNSGESDA--DSDRFRWSYRRTGXXXXXXXXXXWGEEMEARLXGYRVRVASHSDKSVSGR 680
            MLTCIA +KQ    +   ++ E            +QAIKSLTSQLKDMA+KAS AY++C PC+  G        N  +SDA  DS RF +SY+R G          WG EME+RL G  +     +  S+SGR
Sbjct:    1 MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCKPCS--GTTNRNQNRNYADSDAASDSGRFHYSYQRAG--TATSTPKIWGNEMESRLKG--ISSEEGTPTSMSGR 127          
BLAST of EY692932 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 3
Query:  294 MLTCIARSKQ----PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASXAYRHCSPCTAPGAAQSRLKSNSGESD--ADSDRFRWSYRRTGXXXXXXXXXXWGEEMEARLXGYRVRVASHSDKSVSGRV-LTPSCSLRR*AEGWVARWS-RCAYTFV-LCTWRHDLXRY-LSRDML-QWQAQ 827
            MLTCIA +KQ     G     + +           + + IKSLTSQ+KDMA+KAS AY+ C PC+  G++      +  +SD  ++S RFR++Y+R G           G+EME+RL G+       + +S+SGR   T         + WVA+       TFV L    +D+ R   SR+M  +WQAQ
Sbjct:    1 MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQIKSLTSQIKDMAVKASGAYKSCKPCS--GSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKIL--GKEMESRLKGF--LSGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQ 183          
BLAST of EY692932 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 45/107 (42.06%), Postives = 56/107 (52.34%), Query Frame = 3
Query:  294 MLTCIARSKQ----------PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASXAYRHCSPC-----TAPGAAQSRLKSNSGESDADSDRFRWSYRRTG 569
            MLTCIA SKQ            DD+                 +QAIK+LT+Q+KDMALKAS AYRHC PC     ++P A   R       +D+ SDRF ++YRR G
Sbjct:    1 MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKASGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHYAYRRAG 107          
The following BLAST results are available for this feature:
BLAST of EY692932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BRXL4_ARATH3.586e-2043.15Protein Brevis radix-like 4 OS=Arabidopsis thalian... [more]
BRXL3_ARATH1.764e-1542.11Protein Brevis radix-like 3 OS=Arabidopsis thalian... [more]
BRXL2_ARATH1.070e-1234.92Protein Brevis radix-like 2 OS=Arabidopsis thalian... [more]
BRXL1_ORYSJ1.825e-1242.06Protein Brevis radix-like 1 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-A02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692932 ID=EY692932; Name=EY692932; organism=Citrus sinensis; type=EST; length=922bp
CCCATTACTATTAAGCCAGCCAGCAAAGCAGCAGCAATTGCAAGCAAGCC
CTCTGTTTCTCAGTTTCTCTTTTCTTTTGCTCTTCCTTTTATTATTAATG
AAGTTTAAAACCTAATCCTTCATTTCGCTTATGATTAAAGAGAATCTCTG
ATGGGTATACCTGTAACTTGGCATTAAAGTGAGTGAGGGAGTAAGCTTCT
CGATGCTTGCGCTCGGATTTTGAAGCTGTGAATTCAGAATTTACTGCCAC
TACAATTCCAACATAAATTGAGTTGGAGAGTAAAAACTAGAAAATGCTGA
CGTGCATAGCTCGGTCGAAGCAACCGGGGGATGACTCACTTAGTCAACCC
GAGGACTCTGACTCATCGACCGGCAGCGGCAGTACCAAACAACAAGCCAT
CAAATCTCTCACATCTCAGCTAAAGGACATGGCGTTAAAGGCATCANGAG
CATACCGACACTGCAGCCCATGCACGGCTCCTGGTGCGGCTCAGAGTCGA
CTCAAGAGTAACTCGGGAGAGTCTGATGCCGATTCGGACCGGTTCAGGTG
GTCGTACAGAAGGACCGGTAGTTCTAGCTCCACCACACCGANGACCACTT
GGGGGGAAGAGATGGAGGCCAGGCTTAANGGATATCGAGTTCGAGTGGCG
AGCCACTCCGATAAATCGGTGAGTGGTCGCGTGTTGACCCCGTCGTGTTC
ATTGAGAAGATGAGCCGAAGGATGGGTGGCCAGGTGGAGCCGGTGTGCTT
ATACCTTTGTTCTTTGCACGTGGAGGCATGATCTTNAGCGATACCTCAGT
CGAGACATGTTACAATGGCAAGCTCAAGATGGTGGCTGAAACTACATAGG
GCATGAACTTTTATGTACGAGGTAACCGCCAGCTTTCCCTACCACCCCCC
AGACTGAAATGAAGCTCTAAAA
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