EY692928

Overview
NameEY692928
Unique NameEY692928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6288 contig Csv1_Contig6288:1007..1609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI_RICCO (Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.772e-25
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 1
Query:   10 RNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL 243
            ++DAD+VIAK DATANDIP DTF+V+GYPTV+FRSASGK   Y+GDRTK+DI+ FIE NRDKAA +E+    +GKDEL
Sbjct:  424 KSDADIVIAKLDATANDIPSDTFDVRGYPTVYFRSASGKVEQYDGDRTKDDIISFIEKNRDKAAQQESA---NGKDEL 498          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI_MEDSA (Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.056e-21
Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1
Query:   10 RNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAA--------PKETVKEES--GKDEL 243
            ++DADVVIAK DATANDIP DTF+VQGYPT++FRSASGK   Y+G RTKEDI++FIE N+DK          PK   + E+   KDEL
Sbjct:  425 QSDADVVIAKLDATANDIPTDTFDVQGYPTLYFRSASGKLSQYDGGRTKEDIIEFIEKNKDKTGAAHQEVEQPKAAAQPEAEQPKDEL 512          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI2_ARATH (Protein disulfide-isomerase 2 OS=Arabidopsis thaliana GN=At1g77510 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20
Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 1
Query:   10 RNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDK------------AAPKETVKEESGKDEL 243
            +ND  V+IAK DATANDIP DTF+V+G+PT++FRSASG  V YEGDRTKED ++F+E N +K              PK+T +E + KDEL
Sbjct:  420 QNDPSVIIAKLDATANDIPSDTFDVKGFPTIYFRSASGNVVVYEGDRTKEDFINFVEKNSEKKPTSHGEESTKSEEPKKT-EETAAKDEL 508          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI_DATGL (Protein disulfide-isomerase OS=Datisca glomerata GN=PDI PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20
Identity = 42/75 (56.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query:   13 NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKD 237
            ND DV+IAK DATAND P +TF+V+GYPT++F+SASG+ + Y+G RTKED ++FIE NR+K++ KE++ ++   D
Sbjct:  426 NDPDVLIAKLDATANDYPTNTFDVKGYPTLYFKSASGELLQYDGGRTKEDFIEFIEKNREKSSKKESIVKDDQTD 500          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI1_ARATH (Probable protein disulfide-isomerase 1 OS=Arabidopsis thaliana GN=At1g21750 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.861e-19
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query:   10 RNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAA--PKETVKEESGKDEL 243
            ++D+ VVIAK DATAND P DTF+V+G+PT++F+SASG  V YEGDRTKED + F++ N+D      KE    E  KDEL
Sbjct:  422 QSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGDRTKEDFISFVDKNKDTVGEPKKEEETTEEVKDEL 501          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15
Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 1
Query:    7 VRNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKD 237
            ++++ DVVIAK DATAND+PG+ F+VQGYPT++F + SGK V YEG RT ++IVD+I+ N++ A        E   +
Sbjct:  429 LQSEEDVVIAKIDATANDVPGE-FDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIKKNKETAGQAAAAATEKAAE 504          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15
Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 1
Query:    7 VRNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAP-----------KETVKEESGKDEL 243
            +++D +VVIAK DATAND+P + F+VQGYPT++F + SGK   Y+  RT +DIVDFI+ +++ AAP           +E  + E  KDEL
Sbjct:  425 LQSDEEVVIAKMDATANDVPSE-FDVQGYPTLYFVTPSGKVTSYDSGRTADDIVDFIKKSKETAAPHHHHHPGATGIREGSRAEPVKDEL 513          
BLAST of EY692928 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15
Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 1
Query:    7 VRNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGK 234
            ++++ DVVIAK DAT ND+PG+ F+VQGYPT++F + SGK V YEG RT ++IVD+I  N++ A       E++ +
Sbjct:  428 LQSEEDVVIAKMDATENDVPGE-FDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIRKNKETAGQAAAATEKAAE 502          
The following BLAST results are available for this feature:
BLAST of EY692928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PDI_RICCO7.772e-2569.23Protein disulfide-isomerase OS=Ricinus communis PE... [more]
PDI_MEDSA3.056e-2160.23Protein disulfide-isomerase OS=Medicago sativa GN=... [more]
PDI2_ARATH3.379e-2054.44Protein disulfide-isomerase 2 OS=Arabidopsis thali... [more]
PDI_DATGL5.764e-2056.00Protein disulfide-isomerase OS=Datisca glomerata G... [more]
PDI1_ARATH2.861e-1956.25Probable protein disulfide-isomerase 1 OS=Arabidop... [more]
PDI_WHEAT3.273e-1549.35Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_MAIZE7.292e-1546.67Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]
PDI_HORVU7.292e-1548.68Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-H10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692928 ID=EY692928; Name=EY692928; organism=Citrus sinensis; type=EST; length=603bp
CCACGCGTCCGAAATGATGCTGATGTTGTTATTGCAAAATTTGATGCAAC
CGCAAATGATATTCCTGGTGACACCTTTGAAGTCCAAGGTTACCCAACCG
TGTTCTTCCGATCTGCTAGTGGAAAGACAGTGCCCTATGAGGGGGATAGG
ACCAAAGAAGATATTGTTGACTTCATTGAAAATAACAGGGACAAAGCTGC
CCCCAAGGAAACTGTAAAAGAGGAATCTGGAAAAGATGAGCTCTAAGAAG
GAATGGGTATGTTTAGAGAGCCGTGCACATAGTCGGTTGGCGCGTGTTTG
GCGGATGTTATACCAAAACTATCAGTGTCGACAAAACAATGCCTGATGTT
CTCCTCCCCCTTGTCCTATATCCCCCCTTATAGCTTTTTCTGAGGCCATT
TCCCTTTACAGATCTGTTCTGTTCCCGTGAATAAAATGGGGAGGCATTTT
TGGCATTTGTAGCTGCAGTACTTTTTGGTATTCGCATAGTTGTGATATTA
GTATTTTCGGCCTAGGAGTAACTTACTGCGTGTTAAATCCGTAATGGATA
ATTTTAATTTAATGCCTTAATTATTTCGGATTTTGCTTAAAAANNNNNNN
NNN
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