EY692920

Overview
NameEY692920
Unique NameEY692920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.492e-81
Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 1
Query:   13 TGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            +G  NL+ EFYGRV+KSL SG    K  R R+ MMPIGTP+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+R+YMY+NGPGGD+TP+LAIYD
Sbjct:   36 SGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYD 149          

HSP 2 Score: 141.739 bits (356), Expect = 2.492e-81
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIRXI*VXLNALVPQKLFEYG 673
            + TM+SLKSPVGTHCVG AY+LAGFLLA GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ TGQP E++      +     ++  EYG
Sbjct:  148 YDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYG 254          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.294e-41
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ + SK +Y+YIN PGG VT  +A+YD
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYD 82          

HSP 2 Score: 82.0333 bits (201), Expect = 5.294e-41
Identity = 38/88 (43.18%), Postives = 60/88 (68.18%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 616
            + TM  +K+ V T CVG A  +A F+LAGG +G R A+P SRI +  P G +RGQA ++ +E++E++R+R  + K  +++TGQP  +I
Sbjct:   81 YDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRI 168          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_OSTTA (ATP-dependent Clp protease proteolytic subunit OS=Ostreococcus tauri GN=clpP PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.827e-36
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            MPIG PKV YR PGE + QWVDL+N LYRERV+F+G  +D+E +NQ+   MLYL + D S+ +++YIN PGG VT  L+++D
Sbjct:    1 MPIGVPKVAYRLPGESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDASRSLFLYINSPGGSVTAGLSVFD 82          

HSP 2 Score: 66.2402 bits (160), Expect = 7.827e-36
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 616
            F  M  +++ V T  +GFA  +A F+LAGGE+G+R A+P  R+ +  P G   GQA ++  E +E++R+R  I +     TGQP   I
Sbjct:   81 FDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALPHCRVMIHQPQGGMEGQASEVVLEKEEIVRLRRLIGRLYVDLTGQPLSTI 168          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_CHAVU (ATP-dependent Clp protease proteolytic subunit OS=Chara vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.863e-34
Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D+E +NQ++  M+YL+  DDSK ++MYIN PGG V   +A++D
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWVDIYNRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDSKEMFMYINSPGGSVVAGIAVFD 82          

HSP 2 Score: 61.6178 bits (148), Expect = 1.863e-34
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQP 604
            F  MQ +   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   GQA +   EA+E+L++RD I K    +TGQP
Sbjct:   81 FDAMQYVGPDVTTICMGMAASMGSFILMGGEMTKRIALPHARVMIHQPASSYYDGQAGECLMEAEEVLKLRDCIAKVYMNRTGQP 165          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_CHLAT (ATP-dependent Clp protease proteolytic subunit OS=Chlorokybus atmophyticus GN=clpP PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.425e-34
Identity = 41/82 (50.00%), Postives = 62/82 (75.61%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            MPIG PKV YR PGE    +VD++N LYRER++F+G+++D+E +NQ++  M++L+S DD+K ++ YIN PGG +   L +YD
Sbjct:    1 MPIGIPKVAYRIPGESVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNSGLGVYD 82          

HSP 2 Score: 67.0106 bits (162), Expect = 2.425e-34
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIRXI*VXLNALVPQKLFEYG 673
            +  +Q +   V T C+G A  +A F+LAGG  G R   P +R+ L  P G   G+A  +  E+ E+ R+R+ I    +++TGQP E+IR      N + P+   EYG
Sbjct:   81 YDMIQHINVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYAKRTGQPIERIRIDMNRDNFMRPRAAKEYG 187          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_MESVI (ATP-dependent Clp protease proteolytic subunit OS=Mesostigma viride GN=clpP PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.542e-33
Identity = 41/82 (50.00%), Postives = 62/82 (75.61%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            MPIG PKV YR PGE    +VD++N LYRER++F+G+++D+E +NQ++  M++L+S DD+K ++ YIN PGG +   L +YD
Sbjct:    1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNAGLGVYD 82          

HSP 2 Score: 64.3142 bits (155), Expect = 1.542e-33
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIRXI*VXLNALVPQKLFEYG 673
            +  +Q +   V T C+G A  +A F+LAGG  G R   P +R+ L  P G   G+A  +  E+ E+ R+R+ I     ++TGQ  EKIR      N + P++  EYG
Sbjct:   81 YDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRPRQAKEYG 187          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_LEPTE (ATP-dependent Clp protease proteolytic subunit OS=Leptosira terrestris GN=clpP PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.453e-33
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            MP+G PKV Y  P E    W+DL++ LY+ER+I I  ++++E  NQI++ ++YL + DDSK  ++YIN PGG VT  +AIYD
Sbjct:    1 MPVGVPKVFYALPDEEEADWIDLYHCLYQERLIVICGDLNDEAVNQIVSVLIYLSTRDDSKEFFIYINSPGGSVTSGIAIYD 82          

HSP 2 Score: 71.633 bits (174), Expect = 4.453e-33
Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 616
            +  M+   +PV T  VG +  +A F+LAGG+ G R A P SRI +  P G + GQ+ +I +EA E++R+R  + +  +++TGQP + I
Sbjct:   81 YDAMRFNNTPVNTIAVGISASMASFILAGGDIGKRLAFPHSRIMIHQPEGGSEGQSSEIVHEAQEVVRIRRQVARIYAQRTGQPLDTI 168          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_NEPOL (ATP-dependent Clp protease proteolytic subunit OS=Nephroselmis olivacea GN=clpP PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.823e-33
Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDYA 366
            MP+G PKV YR PGE + QWVDL+N LYR+R++F+GQ + +E SNQ+   M+YL + D S  ++MYIN PGG VT  L ++D A
Sbjct:    1 MPVGVPKVPYRLPGESAPQWVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAEDPSIPLFMYINSPGGSVTSGLGVFDIA 84          

HSP 2 Score: 60.4622 bits (145), Expect = 9.823e-33
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 2
Query:  383 VGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 616
            V T CVG A  +A  +L+GG  G R A+P +R+ +  P G +RGQA D+  E+ E+ R+RD +      +T Q  E I
Sbjct:   91 VTTICVGIAASMASLVLSGGSTGQRLALPHARMMIHQPEGGSRGQASDVMYESSEVERLRDIVVDCYVERTHQSRETI 168          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP_PINCO (ATP-dependent Clp protease proteolytic subunit OS=Pinus contorta GN=clpP PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.560e-30
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  115 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 357
            MP+G PKV +R PG+    WVDL+N LYRER++F+ Q+I+ E +NQ++  M+YL + D +K ++ +IN PGG V P + +Y
Sbjct:    1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIFSFINCPGGSVIPGVGLY 81          

HSP 2 Score: 60.077 bits (144), Expect = 5.560e-30
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIR 619
            +  MQ++   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   G A D  NE+  +  VR+YI +    +TGQP E I+
Sbjct:   81 YRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVMIHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQPEEVIQ 170          
BLAST of EY692920 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNS9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9902) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.229e-29
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 2
Query:  353 FTTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIR 619
            F TMQ +K  V T CVG A  +  FLL  G KG RS++  SRI +  P G A GQA DIR +ADE+L ++D +  ELS +TGQP ++I+
Sbjct:   76 FDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQ 164          

HSP 2 Score: 64.6994 bits (156), Expect = 1.229e-29
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  178 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 360
            D+++ L RER+IF+G+ +  + +N+I+A ML+L++ D  K +Y+YIN PGG V   L I+D
Sbjct:   17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFD 77          
The following BLAST results are available for this feature:
BLAST of EY692920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH2.492e-8174.14ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP_OLTVI5.294e-4158.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_OSTTA7.827e-3656.10ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHAVU1.863e-3453.66ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLAT2.425e-3450.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MESVI1.542e-3350.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LEPTE4.453e-3348.78ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NEPOL9.823e-3353.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PINCO5.560e-3046.91ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNS91.229e-2949.44ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-H02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692920 ID=EY692920; Name=EY692920; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGAACTGGGAAACCTAATTTGAGTGCTGAATTCTATGGCAG
AGTTCATAAGAGCCTCTACTCCGGGATTCGTAATGATAAACCAATAAGGG
GACGAATTGCAATGATGCCAATTGGGACACCAAAAGTGCTTTATAGGACG
CCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGGAATGCCCTATATCG
AGAACGTGTTATTTTCATTGGGCAAAATATAGATGAAGAATTTAGCAACC
AAATATTGGCAACGATGTTGTATCTAGACAGTGTTGATGATTCCAAAAGG
GTTTATATGTACATCAACGGTCCTGGTGGGGATGTTACTCCCACCTTGGC
AATTTACGACTATGCAGAGCTTGAAGAGTCCTGTTGGCACTCACTGTGTG
GGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAGCAGGTGGAGAAAAGGG
TAATCGGTCTGCAATGCCTCTTTCGAGAATTGCTTTAGACTCTCCAGCTG
GTGCAGCTCGCGGTCAGGCTGATGACATTCGTAATGAAGCAGATGAGCTT
CTTAGAGTCAGAGATTACATTTTCAAGGAGTTGTCTAGGAAAACAGGTCA
GCCCTTTGAGAAGATACGAANGATTTAAGTANGATTAAACGCTTTGGTTC
CCCAGAAGCTCTTTGAATATGGCTGATAGATCGTATAATCAGGCCACCTC
GTATTAANGAGATATGCCTCGTAAGATGCTGGAACAGGNNCTGGNTAGTG
ATTCATTGATTCCCACTGAGTAGACTGAAGGCATCAATATTTATNCTTCG
GAATTCATTCATCTACTGNAAAATACTACTCATCGAAATATCTTGAGAAG
TTGCTCTGAATGTGTATTTACATCTATAAACTACAAGAATTGATGGTGCC
TGTTTGAGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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