EY692909

Overview
NameEY692909
Unique NameEY692909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14
Identity = 43/130 (33.08%), Postives = 61/130 (46.92%), Query Frame = 3
Query:  276 DNFFSITNTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLM 665
            D      N P   A GF+ Y +F+ A   +   G  T G+      ++ AFL     +T+ G+  A   P AWG C+  E +P  +YC  S    YPC P   YYG   + + W+Y+Y   GEAL   L+
Sbjct:   12 DQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFG--TTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPS--PRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLL 137          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14
Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 3
Query:  297 NTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*-PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLMYHLPYIEQNATLA 704
            N     A GF+ Y +FI A   +    F T G +     +I AFLA    +T+ G G A    P AWG CY+ E++P  SYC       YPC P  +Y+G   + + W+Y+Y   G A+   L+ +   +  + T++
Sbjct:   69 NDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDP--NYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTIS 201          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14
Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 3
Query:  297 NTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*-PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLMYHLPYIEQNATLA 704
            N     A GF+ Y +FI A   +    F T G +     +I AFLA    +T+ G G A    P AWG CY+ E++P  SYC       YPC P  +Y+G   + + W+Y+Y   G A+   L+ +   +  + T++
Sbjct:   91 NDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDP--NYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTIS 223          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 2.531e-14
Identity = 42/143 (29.37%), Postives = 66/143 (46.15%), Query Frame = 3
Query:  276 DNFFSITNTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLMYHLPYIEQNATLA 704
            D+     N     A GF+ Y +FITA   +   GF T G       ++ AF      +T+ G+  A   P +WG C+  E +P   YC+ S   T+PC     YYG   + + W+Y+Y   G A+   L+ +   +  +A +A
Sbjct:   96 DDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPS--ATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIA 234          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 3
Query:  315 AVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEAL 650
            A GF+ Y SF+ A   +    F   G       ++ AFLA +  +T+ G+  A   P AWGLCY  E++P+ SYCD +    +PC P   Y+G   I I W+++Y   G+AL
Sbjct:   72 ARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATD-KQWPCYPGKSYHGRGPIQISWNFNYGPAGQAL 180          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.256e-13
Identity = 43/136 (31.62%), Postives = 67/136 (49.26%), Query Frame = 3
Query:  297 NTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLMYHLPYIEQNATLA 704
            N     A GF+ Y++FITAT  +   G  T G       +I AFLA    +T+ G+  A   P +WG CY+ E      YC  S    +PC P  +Y+G   I I ++Y+Y + G A+   L+ +   +  +A ++
Sbjct:   22 NDRACGAKGFYTYEAFITATKTFAAFG--TTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASS--QQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVS 153          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13
Identity = 40/143 (27.97%), Postives = 64/143 (44.76%), Query Frame = 3
Query:  276 DNFFSITNTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLMYHLPYIEQNATLA 704
            D+     N     A GF+ Y +FI A   +   GF T G       +I AF      +T+ G+  A   P +WG C+  E +P  +YC  S    +PC     YYG   + + W+Y+Y   G A+ + L+ +   +  +  +A
Sbjct:   81 DDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPS--AEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIA 219          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12
Identity = 47/155 (30.32%), Postives = 65/155 (41.94%), Query Frame = 3
Query:  201 GGSAQHGRNSAVYHTISHYFQVYHLDNFFSITNTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLM 665
            G  +Q G  S     +S        D      N     A GF+ Y +FI A   Y   G    G       +I AFL     +T+ G+  A   P AWG C+  E +P  +YC  +    +PC P  +YYG   I I W+Y+Y   G A+   L+
Sbjct:   61 GCQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFG--NTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNP-STYCSATP--QFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLL 210          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 42/130 (32.31%), Postives = 58/130 (44.62%), Query Frame = 3
Query:  276 DNFFSITNTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLM 665
            D      N     A GF+ Y +FI A   Y   G    G       +I AFL     +T+ G+  A   P AWG C+  E +P  +YC  +    +PC P  +YYG   I I W+Y+Y   G A+   L+
Sbjct:   85 DQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFG--NTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNP-SAYCSATP--QFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLL 209          
BLAST of EY692909 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.277e-12
Identity = 45/153 (29.41%), Postives = 65/153 (42.48%), Query Frame = 3
Query:  246 ISHYFQVYHLDNFFSITNTPVAHAVGFWDYQSFITATV*YHPLGFCTAGTKLDNMNDICAFLAHVGCQTSCGYGMATA*PLAWGLCYHHEMSPRQSYCDDSY*YTYPCTPXAEYYGPRAIPIYWHYDYRSTGEALNAYLMYHLPYIEQNATLA 704
            IS+       D      N        F+ Y +FITA   +   GF T G       ++ AF A    +T+ G+  A     AWG CY  E     SYC  S    +PC P  +YYG   I I ++Y+Y   G A+   L+ +   +  NA ++
Sbjct:   85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFR--GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQS--SQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVS 233          
The following BLAST results are available for this feature:
BLAST of EY692909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CHIT_CARPA1.938e-1433.08Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_GOSHI1.938e-1432.12Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI1.938e-1432.12Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIB_ARATH2.531e-1429.37Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI10_ORYSJ4.317e-1436.61Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHID_SOLLC1.256e-1331.62Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI2_BRANA8.141e-1327.97Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_PHAVU2.369e-1230.32Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI5_PHAVU4.040e-1232.31Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI3_TOBAC5.277e-1229.41Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-G03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692909 ID=EY692909; Name=EY692909; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGTCCCCCAAGTGAATCTCGAAACAACAGGTAGATCTGGTG
AGAACGAGAAAATGAACATGAAGAATGGCAGTGTGGCAATGACACTGACA
GTGGCACTACTACTGGCACTGGCAGTGCGTTTGGCTAATGGAGATGAATC
ATATAAGGTGATATTGAACAAGTTGAAGGGGAAAACAGTTTGCATAAAAG
GGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTATACCATACTATATC
ACACTATTTCCAGGTTTACCACCTTGACAATTTCTTCTCGATAACGAACA
CGCCGGTGGCACATGCCGTGGGATTCTGGGATTATCAATCTTTCATTACT
GCCACCGTCTAATATCATCCCCTCGGCTTCTGTACCGCCGGCACTAAGCT
TGATAACATGAACGATATTTGCGCTTTTCTTGCCCACGTGGGCTGCCAGA
CCTCTTGTGGATATGGAATGGCCACTGCATGACCATTGGCCTGGGGACTT
TGCTACCACCATGAAATGAGCCCCAGACAGTCCTATTGTGATGATTCCTA
CTAATACACATATCCCTGCACCCCTGNAGCTGAGTACTATGGCCCAAGAG
CTATACCTATATACTGGCACTATGACTATCGGAGCACTGGCGAAGCATTG
AACGCATATCTGATGTATCATCTCCCATACATAGAGCAGAATGCTACCCT
TGCCCTCTGACGCTGCGATTTGGCACTGCCTGACCCCACTCAAGAAATCC
CAGCCTTCGCACCATGATGCCTTTGTTGCTACTGGTAGGCGACTAGGATG
ATACTTGTACAACAGGGGACCTACTGTGTACCACATGAGTATCTCCATGA
CGACAGCGATGTCGCCTGGTGATATTGTGCTATGACACCTCGCTCTCTTA
CTTGATACCATAA
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