EY692906

Overview
NameEY692906
Unique NameEY692906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_BOVIN (Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.394e-36
Identity = 87/199 (43.72%), Postives = 117/199 (58.79%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTGHCIGSIAEAG 891
            +A F++ L QL V++ K                        PE +NSPY    FP YAE I   GD   ST  LSEVA+   + ++GGSIPE+   +LYNTC VFG DG L+ KHRK+HLFDID+PGKITF ES++L+ G++ ++ DT   R+G+GI YDIRF ELA IY  R    ++  G + +TTG     + + G
Sbjct:    1 MATFRLALIQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTKYFPDYAEKIP--GD---STQKLSEVAKECSMYVIGGSIPEKDAGKLYNTCAVFGPDGTLLVKHRKLHLFDIDVPGKITFQESETLSPGDSFSLFDTPYCRVGLGICYDIRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRG 194          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_RAT (Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.105e-36
Identity = 86/189 (45.50%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            ++ F++ L QL V++ K                        PE +NSPY  + FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKITF ESK+L+ G++ +  DT   R+G+GI YD+RF ELA IY  R    ++  G + MTTG
Sbjct:    1 MSTFRLALIQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPYGTNYFPEYAEKIPG-----ESTKKLSEVAKENSIYLIGGSIPEEDDGKLYNTCAVFGPDGNLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRFAELAQIYARRGCQLLVYPGAFNMTTG 184          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_HUMAN (Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.180e-35
Identity = 84/189 (44.44%), Postives = 110/189 (58.20%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            +  F++ L QL +++ K                        PE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+AK+RKIHLFDID+PGKITF ESK+L+ G++ +  DT   R+G+GI YD+RF ELA IY  R    ++  G + +TTG
Sbjct:    1 MTSFRLALIQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAKYFPEYAEKIPG-----ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTG 184          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_MOUSE (Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.013e-35
Identity = 84/189 (44.44%), Postives = 110/189 (58.20%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            ++ F++ L QL V++ K                        PE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKITF ESK+L+ G++ +  DT   ++G+GI YD+RF ELA IY  R    ++  G + +TTG
Sbjct:    1 MSTFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPG-----ESTQKLSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTG 184          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2A_XENLA (Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.013e-35
Identity = 84/189 (44.44%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            +AKFK+ L Q  V+  K                        PE +NSPY    FP YAE I        ST +LS+VA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ DT   ++G+GI YDIRF ELA IY ++    ++  G + MTTG
Sbjct:    1 MAKFKLSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPYGTTYFPEYAEKIPG-----ESTELLSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDIRFAELAQIYANKGCQLLVYPGAFNMTTG 184          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: YAUB_SCHPO (UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces pombe GN=SPAC26A3.11 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.628e-35
Identity = 86/186 (46.24%), Postives = 110/186 (59.14%), Query Frame = 1
Query:  307 FKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            F++GL QL+ T DK                        PEI+NSPY    F  YAE I+   ++SPS   LS +A+  K  + GGSIPER   +LYNT  VF   GKLIA HRKIHLFDIDIPG ++F ES SL+ G+  T+VDT+ G+ G+GI YDIRF ELAMI      + M+  G + ++TG
Sbjct:   44 FRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFNQYAEPIE---ESSPSYQALSSMAKDTKTYLFGGSIPERKDGKLYNTAMVFDPSGKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGDAMTMVDTEYGKFGLGICYDIRFPELAMIAARNGCSVMIYPGAFNLSTG 226          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2B_XENLA (Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.304e-34
Identity = 81/189 (42.86%), Postives = 110/189 (58.20%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            +AKF++ L Q  V+  K                        PE +NSPY    FP YAE I        ST +LS+VA+   I ++GGSIPE    + YNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ DT   ++G+GI YD+RF ELA IY ++    ++  G + MTTG
Sbjct:    1 MAKFRLSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPYGTKYFPEYAEKIPG-----ESTELLSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDMRFAELAQIYANKGCQLLVYPGAFNMTTG 184          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_XENTR (Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.906e-34
Identity = 81/189 (42.86%), Postives = 109/189 (57.67%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTG 861
            +AKF++ L Q  V+  K                        PE +NSPY    FP YAE I        ST  LS+VA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ +T   ++G+GI YDIRF ELA +Y  +    ++  G + MTTG
Sbjct:    1 MAKFRLSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPYGTKYFPEYAEKIPG-----ESTERLSQVAKECGIYLIGGSIPEEDSGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFETPYCKVGVGICYDIRFAELAQLYSKKGCQLLVYPGAFNMTTG 184          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_PONAB (Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.795e-34
Identity = 85/199 (42.71%), Postives = 112/199 (56.28%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTGHCIGSIAEAG 891
            +A F++ L QL +++                          PE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+AK+RKIHLFDID+PGKITF ESK+L+ G++    DT   R+G+GI YD+RF ELA IY  R    ++  G + +TTG     + + G
Sbjct:    1 MASFRLALIQLQISSINSDNVTRACSFIREAATQGAKIVSLPECFNSPYGTKYFPEYAEKIPG-----ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDSFCTFDT-YCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRG 193          
BLAST of EY692906 vs. ExPASy Swiss-Prot
Match: NIT2_DANRE (Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.884e-33
Identity = 82/199 (41.21%), Postives = 112/199 (56.28%), Query Frame = 1
Query:  298 VAKFKVGLCQLSVTADKEXXXXXXXXXXXXXXXXXXXXXXXPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGILYDIRFQELAMIYGSRVLTDMLSWGIY-MTTGHCIGSIAEAG 891
            ++KF++ + QL V+  K                        PE +NSPY    F  YAE I        ST +LSE A+   I +VGGSIPE  G +LYNTC VFG DG L+  HRKIHLFDID+PGKI F ES++L+ G++ ++ +T   ++G+GI YDIRF ELA IY  +    ++  G + MTTG     + + G
Sbjct:    1 MSKFRLAVVQLHVSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNSPYGTGFFKEYAEKIPG-----ESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLFDIDVPGKIRFQESETLSPGKSLSMFETPYCKVGVGICYDIRFAELAQIYAKKGCQLLVYPGAFNMTTGPAHWELLQRG 194          
The following BLAST results are available for this feature:
BLAST of EY692906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
NIT2_BOVIN1.394e-3643.72Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1[more]
NIT2_RAT3.105e-3645.50Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE... [more]
NIT2_HUMAN1.180e-3544.44Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV... [more]
NIT2_MOUSE2.013e-3544.44Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV... [more]
NIT2A_XENLA2.013e-3544.44Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE... [more]
YAUB_SCHPO2.628e-3546.24UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces ... [more]
NIT2B_XENLA1.304e-3442.86Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE... [more]
NIT2_XENTR2.906e-3442.86Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 P... [more]
NIT2_PONAB3.795e-3442.71Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV... [more]
NIT2_DANRE1.884e-3341.21Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-F12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692906 ID=EY692906; Name=EY692906; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGAATTGAGCTTTGAATAGAGTAAAAAAAAAAAAACAGGGA
AGAAAGTGAAATGAAGTCAGCAGTAGCAATCACTTCTAAGATTCATCTAA
ATCTCAATCTCAGACGCAATCACTTGTACTCCCCTCTCTCTCGTTCCATA
TTTCTCGGAAAGGCTAAACCCGTCTTCCAATCTCCTCCTCTCATCCGCAC
ACACTCGTCAAATCCAAATCCAAATCCAATCATGGCTTCCTCTTCCAAGC
CCGAACAAGCCAGGGCCCCACCCGCCCTTCCCTTGCCCACTCCCCCCGTC
GCCAAGTTTAAGGTTGGGCTTTGCCAATTGTCAGTAACGGCTGACAAAGA
AAGGAACATCGCTCATGCTCGTAGAGCCATTGAGGAGGCCGCTGAGAAAG
GCGCCAAGCTCATTCTTTTGCCTGAGATTTGGAACAGTCCCTATTCGCAT
GACAGCTTCCCAGTTTATGCCGAAGACATTGATGCTGGCGGTGATGCATC
TCCTTCCACCGCCATGCTTTCTGAAGTTGCTCGTCTTCTGAAGATCACTA
TAGTTGGCGGCTCTATTCCCGAACGTTCTGGGGATCGATTGTACAATACT
TGCTGCGTCTTTGGTTCGGATGGGAAACTGATAGCTAAGCACCGGAAGAT
ACACCTTTTTGATATTGACATTCCCGGGAAGATTACCTTTATAGAATCAA
AGTCTCTTACAGCAGGGGAGACACCAACCATTGTGGACACAGATGTTGGG
CGTATTGGAATAGGTATTTTGTATGATATTCGGTTTCAGGAACTGGCAAT
GATATATGGGAGCAGAGTGCTCACTGATATGCTATCCTGGGGCATTTACA
TGACTACTGGGCATTGCATTGGGAGTATTGCAGAGGCAGGGNCACGATNA
TCAGTGTACGTGCAA
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