EY692899

Overview
NameEY692899
Unique NameEY692899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692899 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.138e-28
Identity = 62/148 (41.89%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:   83 MLAVFDKSVAKAPEALQSPQT--ESACALKNGLLANHFSSVHPGSVTVNLGSSGVIAYSLNRQNPLLPRLFAVVDDIFCLFQGHIENVALLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFAFILYDSSSKNAFLA 520
            MLAVF++S+ + P  L  PQ   +   A     +A  F +    S   +L +   +A+S   +NPL PR   V+DD+FC+F G ++N   L++ YGL++ A E +I++EAY+ LRDR PYP DQV+++++GKFAFIL+DS +   FLA
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of EY692899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC1.138e-2841.89Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-F05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692899 ID=EY692899; Name=EY692899; organism=Citrus sinensis; type=EST; length=960bp
CCACGCGTCCGCCCACGCGTCCGATTTCTTTTTGTCTTTCTTTTTATCGT
GGCCAGTGAAGAACGATCGTGAGGGAGAGAAAATGCTGGCAGTGTTTGAC
AAATCGGTGGCCAAAGCCCCAGAGGCTCTGCAGAGTCCACAGACCGAGTC
TGCTTGCGCGCTGAAGAATGGTCTATTGGCTAACCACTTTAGCTCTGTTC
ACCCTGGCTCTGTCACTGTGAATCTTGGCTCTTCTGGCGTCATTGCTTAC
TCCCTTAACAGGCAAAATCCTCTTTTGCCAAGATTATTTGCGGTTGTGGA
TGACATTTTCTGCTTGTTCCAAGGCCACATTGAGAACGTTGCTCTGCTTA
AGCAGCAATATGGACTAAACAAAACAGCAAATGAGGTCATCATTGTCATT
GAGGCTTACAGAACTCTCAGGGATCGAGGTCCTTATCCTGCCGATCAGGT
TGTCAGAGACATTCAAGGGAAGTTTGCATTTATTCTCTATGACAGCTCTT
CGAAAAACGCATTCTTAGCTTCTGATGCTGATGGGAGTGTTCCCTTCTTC
TGGGGTACTGATTCTGAAGGCCATCTTGTTCTTTCCGATGATGTAGAGAT
TGTGAAGAAGGGCTGTGGGAAGTCTTTTGCACCATTCCCTAAAGCATGCT
TCTTTACATCTTCTGGTGGATTGAGGAGCTTCGAGCACCCCATGAATGAG
CTGAAGCCTGTGCCAAGGGTAGATAGTTCAGGTCAGGTTTGTGGNNTCAC
TTTCNAGGTGGATGCTGAGACTAAGAAAGAAACCGNCATGCCCAAGAGTG
GGAGTGCTGCCAACTGGNTCCACAACCCTCTAGTCATAACTACAACTTTC
CGGGAAGGGTTTTATATNATTNGGGCCTTNCGAGGTNNTATTCATCACTT
TTTGCAGTCCCGTACCATCACATGACTATATGCTTATTTGGACCGAGCTT
AACTTGGTTA
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