EY747292

Overview
NameEY747292
Unique NameEY747292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY747292 vs. ExPASy Swiss-Prot
Match: PTAR1_DANRE (Protein prenyltransferase alpha subunit repeat-containing protein 1 OS=Danio rerio GN=ptar1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.730e-12
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 2 
Query:  344 SKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMIARNCS 544
            +  LLLL+ DF TAWN RK ++    L P    +L+L  L LS  PKS + W HRRWV+  + + CS
Sbjct:   91 TSTLLLLNPDFTTAWNVRKELLQCGVLNP--EKDLYLGKLALSKHPKSPETWIHRRWVLQRLQKECS 155

HSP 2 Score: 32.3426 bits (72), Expect = 9.730e-12
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 1 
Query:  562 RERI*ACGKIAERSKMNYRAWNHRCWVGSFMNK 660
            +E +  C + A R   NY AW+HR WV   M K
Sbjct:  179 QEEMRVCAEAAGRYPSNYNAWSHRIWVLQNMAK 211
The following BLAST results are available for this feature:
BLAST of EY747292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PTAR1_DANRE9.730e-1244.78Protein prenyltransferase alpha subunit repeat-con... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-043-D02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY747292 ID=EY747292; Name=EY747292; organism=Citrus sinensis; type=EST; length=915bp
GGGAAACTCGTATACTGAAGCAGAAGCTTTGAATCTCCTGGCGCAATTGG
AACGTATTCTGGACCTTGATCCCCTTATTGATGAAGTAGGATTCATTCAC
CCATCCCAGTTTGCCACATTGAAAGAAGAGATAGGTGATTCTCTCAGTTT
AGAGGATAGGGTCCATGAAAGTACTAGTTTTTGGATCAGAGATCATAAGT
TGGGCATTTCAACGCAAATTCTTATTCCAGTGTATAAGGCGGCTAAACAT
GCATTTATCTCTGCGCTTAGGCAATATAAGACACCTGGCAACTTTTCTGG
TAAATCTCAGGATGACACTCTGGCAATTGAAGTTATGATTCATAGCAAGG
CACTTTTGTTGCTAAGCTGTGACTTTGCCACCGCATGGAATTCCAGGAAG
CTAATTGTGTCAAACAAGCGGCTCCTGCCAATATTAATGGATGAACTTCA
CTTGTCAGCTCTTGTTCTATCGTATTCTCCTAAAAGTGAACAAGCTTGGA
GCCACAGGCGATGGGTGATCAATATGATCGCTAGAAATTGTTCAACTCTG
CAATGGATAATAGAGAGAGAATCTGAGCTTGTGGAAAAATTGCTGAGAGA
TCAAAAATGAACTACCGTGCATGGAATCATCGTTGTTGGGTGGGTTCCTT
CATGAACAAAAAAACAGGTGCTAAAAGAATTGAAAAAATCAAAAAATGGG
CCTGGGGTGGCCCGTGGCTGATAATTCTTGCTTTCATTATCCGAAAAAAG
GGTGATGGTTTAGGAACCTTAAAGGGTTTTTTGCTACCCTCCAAAAAAAA
AATTTCTTTTGGGGTATTTTTGGGGAAACCCTTTCAATATTGGGAAGGGA
AAAAGTTTTGATTGGGGATGGGAGTTTCTTTTGAAAAAACCAAAATTTTG
GGGGGGGAAAAAGAG
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