EY692883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 212 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGM 544 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+ V+PK+ N PG+ Sbjct: 136 QNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 250
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 278 NKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGMKQYRPXAFNPYM-----GYRGR-RPYVP 610 +KE D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E V AL LN S LH R L V PK+ NVPGM + R GYRGR R + P Sbjct: 48 DKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAP 165
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 212 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGM 544 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+ V+PK+ N PG+ Sbjct: 131 QNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PABP2_HUMAN (Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.947e-26 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 212 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGM 544 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+ V+PK+ N PG+ Sbjct: 140 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.947e-26 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 212 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGM 544 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+ V+PK+ N PG+ Sbjct: 140 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.947e-26 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 212 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGM 544 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+ V+PK+ N PG+ Sbjct: 130 QNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 244
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.573e-26 Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 212 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGM 544 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +L L+ES GRQ+ V+PK+ N PG+ Sbjct: 131 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PABP2_DROME (Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.704e-24 Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 212 QAKVEKEM--GAAQDPANVAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGMKQYRPXAFNPY----------------------MGYRGRRPYVPPLFYSPY 631 Q++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+ V+ K+ N PG+ A + MGYRGR Y Y+PY Sbjct: 65 QSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANY-----YAPY 224
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: PABP2_DROPS (Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.788e-23 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 2 Query: 212 QAKVEKEM--GAAQDPANVAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGMKQYRPXAFNPYMGYRGRR 598 Q++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+ V+ K+ N PG+ A + G RG R Sbjct: 65 QSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRG-RGAR 195
BLAST of EY692883 vs. ExPASy Swiss-Prot
Match: EPA2B_XENLA (Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis GN=epabp2-B PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.159e-22 Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 281 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLNVLPKKDNVPGMKQYRPXAFNPYMGYRGR 595 K+E D RSV+VGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E ++V A+ ++E+ GR + VLPK+ N+PG+ G+RGR Sbjct: 87 KKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISS------TDRGGFRGR 186 The following BLAST results are available for this feature:
BLAST of EY692883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692883 ID=EY692883; Name=EY692883; organism=Citrus sinensis; type=EST; length=930bpback to top |